RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 TAF7Q15545 349 aaPredicted RBP22.77■■□□□ 1.24
SFSWAP-205ENST00000537164 KLHL34Q8N239 644 aa22.77■■□□□ 1.24
SFSWAP-205ENST00000537164 ZBTB1Q9Y2K1 713 aa22.77■■□□□ 1.24
SFSWAP-205ENST00000537164 ZNF316A6NFI3 1004 aaPredicted RBP22.76■■□□□ 1.23
SFSWAP-205ENST00000537164 MMP10P09238 476 aa22.76■■□□□ 1.23
SFSWAP-205ENST00000537164 COL15A1P39059 1388 aa22.76■■□□□ 1.23
SFSWAP-205ENST00000537164 EIF5P55010 431 aaKnown RBP22.74■■□□□ 1.23
SFSWAP-205ENST00000537164 CHD4Q14839 1912 aa22.74■■□□□ 1.23
SFSWAP-205ENST00000537164 SRP68Q9UHB9 627 aaKnown RBP22.73■■□□□ 1.23
SFSWAP-205ENST00000537164 NARFQ9UHQ1 456 aa22.73■■□□□ 1.23
SFSWAP-205ENST00000537164 KIAA1551Q9HCM1 1747 aa22.72■■□□□ 1.23
SFSWAP-205ENST00000537164 PNISRQ8TF01 805 aaKnown RBP22.72■■□□□ 1.23
SFSWAP-205ENST00000537164 FKBP8Q14318 412 aa22.71■■□□□ 1.23
SFSWAP-205ENST00000537164 C10orf71Q711Q0 1435 aa22.71■■□□□ 1.23
SFSWAP-205ENST00000537164 ZPR1O75312 459 aa22.7■■□□□ 1.22
SFSWAP-205ENST00000537164 SNRPA1P09661 255 aaKnown RBP22.7■■□□□ 1.22
SFSWAP-205ENST00000537164 TM4SF1P30408 202 aa22.7■■□□□ 1.22
SFSWAP-205ENST00000537164 IL6STP40189 918 aaPredicted RBP22.7■■□□□ 1.22
SFSWAP-205ENST00000537164 TMPOP42166 694 aaKnown RBP22.7■■□□□ 1.22
SFSWAP-205ENST00000537164 WDR43Q15061 677 aaKnown RBP eCLIP22.7■■□□□ 1.227e-6■■■■■ 27.3
SFSWAP-205ENST00000537164 ADAMTS8Q9UP79 889 aa22.7■■□□□ 1.22
SFSWAP-205ENST00000537164 LAMB4A4D0S4 1761 aa22.7■■□□□ 1.22
SFSWAP-205ENST00000537164 CANXP27824 592 aaKnown RBP22.69■■□□□ 1.22
SFSWAP-205ENST00000537164 RIPK4P57078 832 aa22.69■■□□□ 1.22
SFSWAP-205ENST00000537164 USPL1Q5W0Q7 1092 aa22.69■■□□□ 1.22
SFSWAP-205ENST00000537164 RUNDC1Q96C34 613 aa22.69■■□□□ 1.22
SFSWAP-205ENST00000537164 USP16Q9Y5T5 823 aa22.69■■□□□ 1.22
SFSWAP-205ENST00000537164 SCN7AQ01118 1682 aa22.68■■□□□ 1.22
SFSWAP-205ENST00000537164 A0A087WZG4 1122 aa22.68■■□□□ 1.22
SFSWAP-205ENST00000537164 GPR162Q16538 588 aa22.68■■□□□ 1.22
SFSWAP-205ENST00000537164 PARP3Q9Y6F1 533 aa22.68■■□□□ 1.22
SFSWAP-205ENST00000537164 NRXN2Q9P2S2 1712 aa22.68■■□□□ 1.22
SFSWAP-205ENST00000537164 LMOD3Q0VAK6 560 aa22.67■■□□□ 1.22
SFSWAP-205ENST00000537164 THUMPD2Q9BTF0 503 aaKnown RBP22.67■■□□□ 1.22
SFSWAP-205ENST00000537164 BCL2L12Q9HB09 334 aa22.67■■□□□ 1.22
SFSWAP-205ENST00000537164 MIS18AQ9NYP9 233 aa22.67■■□□□ 1.22
SFSWAP-205ENST00000537164 PRAMEF22A3QJZ6 481 aa22.66■■□□□ 1.22
SFSWAP-205ENST00000537164 A1BGP04217 495 aa22.66■■□□□ 1.22
SFSWAP-205ENST00000537164 DDR1Q08345 913 aa22.66■■□□□ 1.22
SFSWAP-205ENST00000537164 AFDNP55196 1824 aaKnown RBP22.66■■□□□ 1.22
SFSWAP-205ENST00000537164 POLRMTO00411 1230 aaKnown RBP22.65■■□□□ 1.22
SFSWAP-205ENST00000537164 YBX3P16989 372 aaKnown RBP eCLIP22.65■■□□□ 1.223e-8■■□□□ 11.6
SFSWAP-205ENST00000537164 TGFB2P61812 414 aa22.65■■□□□ 1.22
SFSWAP-205ENST00000537164 BABAM1Q9NWV8 329 aa22.65■■□□□ 1.22
SFSWAP-205ENST00000537164 BCORQ6W2J9 1755 aa22.65■■□□□ 1.22
SFSWAP-205ENST00000537164 N4BP2Q86UW6 1770 aaPredicted RBP22.65■■□□□ 1.22
SFSWAP-205ENST00000537164 PXDNLA1KZ92 1463 aa22.65■■□□□ 1.22
SFSWAP-205ENST00000537164 BRCA1P38398 1863 aaKnown RBP22.64■■□□□ 1.22
SFSWAP-205ENST00000537164 YY1P25490 414 aa22.64■■□□□ 1.21
SFSWAP-205ENST00000537164 EIF4A1P60842 406 aaKnown RBP22.64■■□□□ 1.21
SFSWAP-205ENST00000537164 CCDC146Q8IYE0 955 aa22.64■■□□□ 1.21
SFSWAP-205ENST00000537164 GRIN3BO60391 1043 aa22.63■■□□□ 1.21
SFSWAP-205ENST00000537164 GIGYF1O75420 1035 aaPredicted RBP22.62■■□□□ 1.21
SFSWAP-205ENST00000537164 NFIXQ14938 502 aa22.62■■□□□ 1.21
SFSWAP-205ENST00000537164 TRIM35Q9UPQ4 493 aa22.61■■□□□ 1.21
SFSWAP-205ENST00000537164 NBPF26B4DH59 902 aa22.6■■□□□ 1.21
SFSWAP-205ENST00000537164 NBPF10Q6P3W6 841 aaKnown RBP22.6■■□□□ 1.21
SFSWAP-205ENST00000537164 PELP1Q8IZL8 1130 aaKnown RBP22.6■■□□□ 1.21
SFSWAP-205ENST00000537164 NBPF15Q8N660 670 aa22.6■■□□□ 1.21
SFSWAP-205ENST00000537164 RRP7AQ9Y3A4 280 aaKnown RBP22.6■■□□□ 1.21
SFSWAP-205ENST00000537164 TBC1D2BQ9UPU7 963 aa22.59■■□□□ 1.21
SFSWAP-205ENST00000537164 RGL2O15211 777 aa22.58■■□□□ 1.21
SFSWAP-205ENST00000537164 CAMTA2O94983 1202 aa22.58■■□□□ 1.21
SFSWAP-205ENST00000537164 NPM2Q86SE8 214 aaKnown RBP22.58■■□□□ 1.21
SFSWAP-205ENST00000537164 TSPYL4Q9UJ04 414 aa22.58■■□□□ 1.21
SFSWAP-205ENST00000537164 NEUROD2Q15784 382 aa22.57■■□□□ 1.2
SFSWAP-205ENST00000537164 CCDC184Q52MB2 194 aa22.57■■□□□ 1.2
SFSWAP-205ENST00000537164 DZIP3Q86Y13 1208 aaKnown RBP22.57■■□□□ 1.2
SFSWAP-205ENST00000537164 KCNA3P22001 575 aa22.56■■□□□ 1.2
SFSWAP-205ENST00000537164 PIP4K2AP48426 406 aaPredicted RBP22.56■■□□□ 1.2
SFSWAP-205ENST00000537164 CLEC4GQ6UXB4 293 aa22.56■■□□□ 1.2
SFSWAP-205ENST00000537164 ZNF330Q9Y3S2 320 aaPredicted RBP22.56■■□□□ 1.2
SFSWAP-205ENST00000537164 ARFGEF1Q9Y6D6 1849 aa22.55■■□□□ 1.2
SFSWAP-205ENST00000537164 A0A0G2JLW4 131 aa22.55■■□□□ 1.2
SFSWAP-205ENST00000537164 CHL1O00533 1208 aa22.55■■□□□ 1.2
SFSWAP-205ENST00000537164 ANP32CO43423 234 aa22.55■■□□□ 1.2
SFSWAP-205ENST00000537164 SERPINB2P05120 415 aa22.55■■□□□ 1.2
SFSWAP-205ENST00000537164 TBC1D9BQ66K14 1250 aa22.55■■□□□ 1.2
SFSWAP-205ENST00000537164 DLEC1Q9Y238 1755 aa22.54■■□□□ 1.2
SFSWAP-205ENST00000537164 DPEP1P16444 411 aa22.54■■□□□ 1.2
SFSWAP-205ENST00000537164 ERBB4Q15303 1308 aa22.54■■□□□ 1.2
SFSWAP-205ENST00000537164 CARMIL3Q8ND23 1372 aa22.53■■□□□ 1.2
SFSWAP-205ENST00000537164 APAF1O14727 1248 aa22.52■■□□□ 1.2
SFSWAP-205ENST00000537164 ANKRD31Q8N7Z5 1873 aa22.51■■□□□ 1.19
SFSWAP-205ENST00000537164 BICDL1Q6ZP65 573 aa22.5■■□□□ 1.19
SFSWAP-205ENST00000537164 CFAP44Q96MT7 982 aa22.5■■□□□ 1.19
SFSWAP-205ENST00000537164 SETDB2Q96T68 719 aa22.5■■□□□ 1.19
SFSWAP-205ENST00000537164 NUP98P52948 1817 aa22.5■■□□□ 1.19
SFSWAP-205ENST00000537164 PIM2Q9P1W9 311 aa22.49■■□□□ 1.19
SFSWAP-205ENST00000537164 ZNF652Q9Y2D9 606 aa22.49■■□□□ 1.19
SFSWAP-205ENST00000537164 ZNF853P0CG23 659 aa22.48■■□□□ 1.19
SFSWAP-205ENST00000537164 WWC3Q9ULE0 1092 aa22.48■■□□□ 1.19
SFSWAP-205ENST00000537164 ERVV-1B6SEH8 477 aa22.47■■□□□ 1.19
SFSWAP-205ENST00000537164 PRR5LQ6MZQ0 368 aa22.47■■□□□ 1.19
SFSWAP-205ENST00000537164 LRP10Q7Z4F1 713 aa22.47■■□□□ 1.19
SFSWAP-205ENST00000537164 ZNF784Q8NCA9 323 aaPredicted RBP22.47■■□□□ 1.19
SFSWAP-205ENST00000537164 BCS1LQ9Y276 419 aa22.47■■□□□ 1.19
SFSWAP-205ENST00000537164 CHRNA5P30532 468 aa22.46■■□□□ 1.19
SFSWAP-205ENST00000537164 PDIA6Q15084 440 aa22.46■■□□□ 1.19
SFSWAP-205ENST00000537164 NCBP3Q53F19 620 aaKnown RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms