RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 RTCBQ9Y3I0 505 aaKnown RBP23.43■■□□□ 1.34
DDX55-204ENST00000536079 A1BGP04217 495 aa23.42■■□□□ 1.34
DDX55-204ENST00000536079 SNRPA1P09661 255 aaKnown RBP23.42■■□□□ 1.34
DDX55-204ENST00000536079 HMGB2P26583 209 aaKnown RBP23.42■■□□□ 1.34
DDX55-204ENST00000536079 KRT24Q2M2I5 525 aa23.42■■□□□ 1.34
DDX55-204ENST00000536079 MSL1Q68DK7 614 aa23.42■■□□□ 1.34
DDX55-204ENST00000536079 ARHGEF1Q92888 912 aaKnown RBP23.42■■□□□ 1.34
DDX55-204ENST00000536079 SGIP1Q9BQI5 828 aa23.42■■□□□ 1.34
DDX55-204ENST00000536079 MTFR1LQ9H019 292 aa23.42■■□□□ 1.34
DDX55-204ENST00000536079 GIGYF1O75420 1035 aaPredicted RBP23.41■■□□□ 1.34
DDX55-204ENST00000536079 ZNF853P0CG23 659 aa23.41■■□□□ 1.34
DDX55-204ENST00000536079 PIP4K2AP48426 406 aaPredicted RBP23.41■■□□□ 1.34
DDX55-204ENST00000536079 WWC1Q8IX03 1113 aa23.41■■□□□ 1.34
DDX55-204ENST00000536079 SPON1Q9HCB6 807 aa23.41■■□□□ 1.34
DDX55-204ENST00000536079 SOS1Q07889 1333 aaPredicted RBP23.4■■□□□ 1.34
DDX55-204ENST00000536079 CANXP27824 592 aaKnown RBP23.4■■□□□ 1.34
DDX55-204ENST00000536079 TRAPPC3LQ5T215 181 aa23.4■■□□□ 1.34
DDX55-204ENST00000536079 FLAD1Q8NFF5 587 aa23.4■■□□□ 1.34
DDX55-204ENST00000536079 BABAM1Q9NWV8 329 aa23.4■■□□□ 1.34
DDX55-204ENST00000536079 STARD3NLO95772 234 aa23.39■■□□□ 1.33
DDX55-204ENST00000536079 CCDC27Q2M243 656 aa23.39■■□□□ 1.33
DDX55-204ENST00000536079 SLC16A10Q8TF71 515 aa23.39■■□□□ 1.33
DDX55-204ENST00000536079 CFAP44Q96MT7 982 aa23.39■■□□□ 1.33
DDX55-204ENST00000536079 TEX13AQ9BXU3 409 aaPredicted RBP23.39■■□□□ 1.33
DDX55-204ENST00000536079 MBIPQ9NS73 344 aa23.39■■□□□ 1.33
DDX55-204ENST00000536079 LRP5O75197 1615 aa23.39■■□□□ 1.33
DDX55-204ENST00000536079 SRP68Q9UHB9 627 aaKnown RBP23.38■■□□□ 1.33
DDX55-204ENST00000536079 NBPF26B4DH59 902 aa23.36■■□□□ 1.33
DDX55-204ENST00000536079 EIF5P55010 431 aaKnown RBP23.36■■□□□ 1.33
DDX55-204ENST00000536079 NBPF10Q6P3W6 841 aaKnown RBP23.36■■□□□ 1.33
DDX55-204ENST00000536079 NBPF15Q8N660 670 aa23.36■■□□□ 1.33
DDX55-204ENST00000536079 ADRA2BP18089 450 aa23.35■■□□□ 1.33
DDX55-204ENST00000536079 NCBP3Q53F19 620 aaKnown RBP23.35■■□□□ 1.33
DDX55-204ENST00000536079 IFT57Q9NWB7 429 aa23.35■■□□□ 1.33
DDX55-204ENST00000536079 COL15A1P39059 1388 aa23.33■■□□□ 1.33
DDX55-204ENST00000536079 GYS1P13807 737 aa23.33■■□□□ 1.33
DDX55-204ENST00000536079 RFC4P35249 363 aa23.33■■□□□ 1.33
DDX55-204ENST00000536079 SPINK5Q9NQ38 1064 aaPredicted RBP23.33■■□□□ 1.33
DDX55-204ENST00000536079 C4AP0C0L4 1744 aa23.33■■□□□ 1.32
DDX55-204ENST00000536079 GNAI1P63096 354 aa23.32■■□□□ 1.32
DDX55-204ENST00000536079 TSR2Q969E8 191 aaKnown RBP23.32■■□□□ 1.32
DDX55-204ENST00000536079 COL24A1Q17RW2 1714 aa23.32■■□□□ 1.32
DDX55-204ENST00000536079 USP42Q9H9J4 1324 aaKnown RBP23.32■■□□□ 1.32
DDX55-204ENST00000536079 CALD1Q05682 793 aaKnown RBP23.31■■□□□ 1.32
DDX55-204ENST00000536079 ZNF330Q9Y3S2 320 aaPredicted RBP23.31■■□□□ 1.32
DDX55-204ENST00000536079 EIF2S2P20042 333 aaKnown RBP23.3■■□□□ 1.32
DDX55-204ENST00000536079 IL6STP40189 918 aaPredicted RBP23.3■■□□□ 1.32
DDX55-204ENST00000536079 FKBP8Q14318 412 aa23.3■■□□□ 1.32
DDX55-204ENST00000536079 USPL1Q5W0Q7 1092 aa23.3■■□□□ 1.32
DDX55-204ENST00000536079 NECTIN2Q92692 538 aa23.3■■□□□ 1.32
DDX55-204ENST00000536079 BCL2L12Q9HB09 334 aa23.3■■□□□ 1.32
DDX55-204ENST00000536079 C8orf58Q8NAV2 365 aa23.29■■□□□ 1.32
DDX55-204ENST00000536079 TBC1D2BQ9UPU7 963 aa23.29■■□□□ 1.32
DDX55-204ENST00000536079 ZNF521Q96K83 1311 aa23.29■■□□□ 1.32
DDX55-204ENST00000536079 LAMB4A4D0S4 1761 aa23.28■■□□□ 1.32
DDX55-204ENST00000536079 PDIA6Q15084 440 aa23.28■■□□□ 1.32
DDX55-204ENST00000536079 NARFQ9UHQ1 456 aa23.28■■□□□ 1.32
DDX55-204ENST00000536079 ANXA1P04083 346 aa23.27■■□□□ 1.32
DDX55-204ENST00000536079 PROSER3Q2NL68 480 aa23.27■■□□□ 1.32
DDX55-204ENST00000536079 DUSP27Q5VZP5 1158 aa23.27■■□□□ 1.32
DDX55-204ENST00000536079 WDR63Q8IWG1 891 aa23.27■■□□□ 1.32
DDX55-204ENST00000536079 TSPYL6Q8N831 410 aa23.27■■□□□ 1.32
DDX55-204ENST00000536079 ARXQ96QS3 562 aa23.27■■□□□ 1.32
DDX55-204ENST00000536079 IL16Q14005 1332 aa23.27■■□□□ 1.32
DDX55-204ENST00000536079 ELL2O00472 640 aaPredicted RBP23.26■■□□□ 1.31
DDX55-204ENST00000536079 LRP10Q7Z4F1 713 aa23.26■■□□□ 1.31
DDX55-204ENST00000536079 PPP1R1BQ9UD71 204 aaPredicted RBP23.26■■□□□ 1.31
DDX55-204ENST00000536079 MMP10P09238 476 aa23.25■■□□□ 1.31
DDX55-204ENST00000536079 POLD1P28340 1107 aa23.25■■□□□ 1.31
DDX55-204ENST00000536079 NGEFQ8N5V2 710 aa23.25■■□□□ 1.31
DDX55-204ENST00000536079 ZPR1O75312 459 aa23.24■■□□□ 1.31
DDX55-204ENST00000536079 CAMTA2O94983 1202 aa23.24■■□□□ 1.31
DDX55-204ENST00000536079 MYL6BP14649 208 aa23.24■■□□□ 1.31
DDX55-204ENST00000536079 A0A087WZG4 1122 aa23.23■■□□□ 1.31
DDX55-204ENST00000536079 DDR1Q08345 913 aa23.23■■□□□ 1.31
DDX55-204ENST00000536079 DZIP3Q86Y13 1208 aaKnown RBP23.23■■□□□ 1.31
DDX55-204ENST00000536079 NLGN1Q8N2Q7 840 aa23.23■■□□□ 1.31
DDX55-204ENST00000536079 FHDC1Q9C0D6 1143 aaPredicted RBP23.23■■□□□ 1.31
DDX55-204ENST00000536079 FANCIQ9NVI1 1328 aa23.23■■□□□ 1.31
DDX55-204ENST00000536079 TM4SF1P30408 202 aa23.22■■□□□ 1.31
DDX55-204ENST00000536079 TTLL7Q6ZT98 887 aa23.22■■□□□ 1.31
DDX55-204ENST00000536079 HOXB7P09629 217 aa23.2■■□□□ 1.3
DDX55-204ENST00000536079 NFIXQ14938 502 aa23.2■■□□□ 1.3
DDX55-204ENST00000536079 HDGFL1Q5TGJ6 251 aa23.2■■□□□ 1.3
DDX55-204ENST00000536079 CHPF2Q9P2E5 772 aa23.2■■□□□ 1.3
DDX55-204ENST00000536079 ERBB4Q15303 1308 aa23.19■■□□□ 1.3
DDX55-204ENST00000536079 TBC1D9BQ66K14 1250 aa23.19■■□□□ 1.3
DDX55-204ENST00000536079 HLFQ16534 295 aa23.18■■□□□ 1.3
DDX55-204ENST00000536079 BICDL1Q6ZP65 573 aa23.18■■□□□ 1.3
DDX55-204ENST00000536079 KLHL34Q8N239 644 aa23.18■■□□□ 1.3
DDX55-204ENST00000536079 SYT17Q9BSW7 474 aa23.18■■□□□ 1.3
DDX55-204ENST00000536079 SCN7AQ01118 1682 aa23.17■■□□□ 1.3
DDX55-204ENST00000536079 POLRMTO00411 1230 aaKnown RBP23.17■■□□□ 1.3
DDX55-204ENST00000536079 EXOSC9Q06265 439 aaKnown RBP23.17■■□□□ 1.3
DDX55-204ENST00000536079 CDCA7LQ96GN5 454 aa23.17■■□□□ 1.3
DDX55-204ENST00000536079 NLGN2Q8NFZ4 835 aa23.16■■□□□ 1.3
DDX55-204ENST00000536079 DDX21Q9NR30 783 aaKnown RBP eCLIP23.16■■□□□ 1.3
DDX55-204ENST00000536079 TCERG1O14776 1098 aaKnown RBP23.15■■□□□ 1.3
DDX55-204ENST00000536079 NPM2Q86SE8 214 aaKnown RBP23.15■■□□□ 1.3
DDX55-204ENST00000536079 GOLGA2Q08379 1002 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms