RNA–Protein interactions for RNA: ENST00000535561.5

SOD2-209, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-209ENST00000535561 SENP3-EIF4A1A0A087X0R7 540 aa18.82■□□□□ 0.6
SOD2-209ENST00000535561 HNRNPUQ00839 825 aaKnown RBP eCLIP18.82■□□□□ 0.6
SOD2-209ENST00000535561 COL5A3P25940 1745 aaPredicted RBP18.82■□□□□ 0.6
SOD2-209ENST00000535561 TAF1LQ8IZX4 1826 aa18.81■□□□□ 0.6
SOD2-209ENST00000535561 GNPATO15228 680 aa18.81■□□□□ 0.6
SOD2-209ENST00000535561 RPS6KA4O75676 772 aa18.81■□□□□ 0.6
SOD2-209ENST00000535561 INTS5Q6P9B9 1019 aaKnown RBP18.81■□□□□ 0.6
SOD2-209ENST00000535561 RTCBQ9Y3I0 505 aaKnown RBP18.81■□□□□ 0.6
SOD2-209ENST00000535561 FANCIQ9NVI1 1328 aa18.8■□□□□ 0.6
SOD2-209ENST00000535561 ZBED9Q6R2W3 1325 aa18.79■□□□□ 0.6
SOD2-209ENST00000535561 R3HDM1Q15032 1099 aaKnown RBP18.79■□□□□ 0.6
SOD2-209ENST00000535561 USP16Q9Y5T5 823 aa18.79■□□□□ 0.6
SOD2-209ENST00000535561 IL6STP40189 918 aaPredicted RBP18.78■□□□□ 0.6
SOD2-209ENST00000535561 SLFN5Q08AF3 891 aa18.78■□□□□ 0.6
SOD2-209ENST00000535561 DUSP27Q5VZP5 1158 aa18.78■□□□□ 0.6
SOD2-209ENST00000535561 SLC16A10Q8TF71 515 aa18.78■□□□□ 0.6
SOD2-209ENST00000535561 TSR2Q969E8 191 aaKnown RBP18.78■□□□□ 0.6
SOD2-209ENST00000535561 PNPLA7Q6ZV29 1317 aa18.77■□□□□ 0.6
SOD2-209ENST00000535561 A0A087WZG4 1122 aa18.77■□□□□ 0.6
SOD2-209ENST00000535561 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.77■□□□□ 0.6
SOD2-209ENST00000535561 QSER1Q2KHR3 1735 aa18.77■□□□□ 0.59
SOD2-209ENST00000535561 PRAMEF22A3QJZ6 481 aa18.76■□□□□ 0.59
SOD2-209ENST00000535561 TRAPPC3LQ5T215 181 aa18.76■□□□□ 0.59
SOD2-209ENST00000535561 TRMT2AQ8IZ69 625 aaKnown RBP18.76■□□□□ 0.59
SOD2-209ENST00000535561 SPINK5Q9NQ38 1064 aaPredicted RBP18.76■□□□□ 0.59
SOD2-209ENST00000535561 ZBTB1Q9Y2K1 713 aa18.76■□□□□ 0.59
SOD2-209ENST00000535561 EIF5P55010 431 aaKnown RBP18.75■□□□□ 0.59
SOD2-209ENST00000535561 NPM2Q86SE8 214 aaKnown RBP18.75■□□□□ 0.59
SOD2-209ENST00000535561 C8orf58Q8NAV2 365 aa18.75■□□□□ 0.59
SOD2-209ENST00000535561 LAMB4A4D0S4 1761 aa18.75■□□□□ 0.59
SOD2-209ENST00000535561 RGL2O15211 777 aa18.74■□□□□ 0.59
SOD2-209ENST00000535561 A1BGP04217 495 aa18.74■□□□□ 0.59
SOD2-209ENST00000535561 HDGFL1Q5TGJ6 251 aa18.74■□□□□ 0.59
SOD2-209ENST00000535561 COL15A1P39059 1388 aa18.73■□□□□ 0.59
SOD2-209ENST00000535561 CANXP27824 592 aaKnown RBP18.73■□□□□ 0.59
SOD2-209ENST00000535561 KRT24Q2M2I5 525 aa18.73■□□□□ 0.59
SOD2-209ENST00000535561 TWISTNBQ3B726 338 aaPredicted RBP18.73■□□□□ 0.59
SOD2-209ENST00000535561 COL23A1Q86Y22 540 aaPredicted RBP18.73■□□□□ 0.59
SOD2-209ENST00000535561 UBR3Q6ZT12 1888 aa18.72■□□□□ 0.59
SOD2-209ENST00000535561 PSDA5PKW4 1024 aaPredicted RBP18.72■□□□□ 0.59
SOD2-209ENST00000535561 NBPF26B4DH59 902 aa18.72■□□□□ 0.59
SOD2-209ENST00000535561 CT47B1P0C2W7 299 aaPredicted RBP18.72■□□□□ 0.59
SOD2-209ENST00000535561 RFC4P35249 363 aa18.72■□□□□ 0.59
SOD2-209ENST00000535561 CCDC30Q5VVM6 783 aa18.72■□□□□ 0.59
SOD2-209ENST00000535561 NBPF10Q6P3W6 841 aaKnown RBP18.72■□□□□ 0.59
SOD2-209ENST00000535561 NBPF15Q8N660 670 aa18.72■□□□□ 0.59
SOD2-209ENST00000535561 ARHGEF1Q92888 912 aaKnown RBP18.72■□□□□ 0.59
SOD2-209ENST00000535561 ZNF428Q96B54 188 aa18.72■□□□□ 0.59
SOD2-209ENST00000535561 DDX21Q9NR30 783 aaKnown RBP eCLIP18.72■□□□□ 0.59
SOD2-209ENST00000535561 DBF4Q9UBU7 674 aaPredicted RBP18.72■□□□□ 0.59
SOD2-209ENST00000535561 PHF14O94880 888 aa18.71■□□□□ 0.59
SOD2-209ENST00000535561 EIF2S2P20042 333 aaKnown RBP18.71■□□□□ 0.59
SOD2-209ENST00000535561 EXOSC9Q06265 439 aaKnown RBP18.71■□□□□ 0.59
SOD2-209ENST00000535561 AMIGO3Q86WK7 504 aa18.71■□□□□ 0.59
SOD2-209ENST00000535561 MYH14Q7Z406 1995 aaKnown RBP18.71■□□□□ 0.59
SOD2-209ENST00000535561 PDIA6Q15084 440 aa18.7■□□□□ 0.58
SOD2-209ENST00000535561 TSPYL6Q8N831 410 aa18.7■□□□□ 0.58
SOD2-209ENST00000535561 CDCA7LQ96GN5 454 aa18.7■□□□□ 0.58
SOD2-209ENST00000535561 MTFR1LQ9H019 292 aa18.7■□□□□ 0.58
SOD2-209ENST00000535561 HYPKQ9NX55 129 aa18.7■□□□□ 0.58
SOD2-209ENST00000535561 USP42Q9H9J4 1324 aaKnown RBP18.7■□□□□ 0.58
SOD2-209ENST00000535561 CASZ1Q86V15 1759 aa18.69■□□□□ 0.58
SOD2-209ENST00000535561 ELL2O00472 640 aaPredicted RBP18.69■□□□□ 0.58
SOD2-209ENST00000535561 MSH5O43196 834 aa18.69■□□□□ 0.58
SOD2-209ENST00000535561 ZPR1O75312 459 aa18.69■□□□□ 0.58
SOD2-209ENST00000535561 VAMP4O75379 141 aa18.69■□□□□ 0.58
SOD2-209ENST00000535561 NARFQ9UHQ1 456 aa18.69■□□□□ 0.58
SOD2-209ENST00000535561 STK31Q9BXU1 1019 aa18.68■□□□□ 0.58
SOD2-209ENST00000535561 LRP10Q7Z4F1 713 aa18.67■□□□□ 0.58
SOD2-209ENST00000535561 NLGN1Q8N2Q7 840 aa18.67■□□□□ 0.58
SOD2-209ENST00000535561 CHPF2Q9P2E5 772 aa18.67■□□□□ 0.58
SOD2-209ENST00000535561 TUBGCP6Q96RT7 1819 aa18.67■□□□□ 0.58
SOD2-209ENST00000535561 ERVV-1B6SEH8 477 aa18.66■□□□□ 0.58
SOD2-209ENST00000535561 CLEC4GQ6UXB4 293 aa18.66■□□□□ 0.58
SOD2-209ENST00000535561 DZIP3Q86Y13 1208 aaKnown RBP18.66■□□□□ 0.58
SOD2-209ENST00000535561 PDGFDQ9GZP0 370 aaPredicted RBP18.66■□□□□ 0.58
SOD2-209ENST00000535561 GYS1P13807 737 aa18.65■□□□□ 0.58
SOD2-209ENST00000535561 MYL6BP14649 208 aa18.65■□□□□ 0.58
SOD2-209ENST00000535561 KIF6Q6ZMV9 814 aa18.65■□□□□ 0.58
SOD2-209ENST00000535561 NECTIN2Q92692 538 aa18.65■□□□□ 0.58
SOD2-209ENST00000535561 SPON1Q9HCB6 807 aa18.65■□□□□ 0.58
SOD2-209ENST00000535561 ZNF652Q9Y2D9 606 aa18.65■□□□□ 0.58
SOD2-209ENST00000535561 ZNF330Q9Y3S2 320 aaPredicted RBP18.65■□□□□ 0.58
SOD2-209ENST00000535561 PIP4K2AP48426 406 aaPredicted RBP18.64■□□□□ 0.57
SOD2-209ENST00000535561 PROSER3Q2NL68 480 aa18.64■□□□□ 0.57
SOD2-209ENST00000535561 CAMTA2O94983 1202 aa18.63■□□□□ 0.57
SOD2-209ENST00000535561 SMIM5Q71RC9 77 aa18.63■□□□□ 0.57
SOD2-209ENST00000535561 ZBTB7AO95365 584 aa18.62■□□□□ 0.57
SOD2-209ENST00000535561 POLD1P28340 1107 aa18.62■□□□□ 0.57
SOD2-209ENST00000535561 USPL1Q5W0Q7 1092 aa18.62■□□□□ 0.57
SOD2-209ENST00000535561 SRP68Q9UHB9 627 aaKnown RBP18.62■□□□□ 0.57
SOD2-209ENST00000535561 TBC1D2BQ9UPU7 963 aa18.62■□□□□ 0.57
SOD2-209ENST00000535561 MAP3K15Q6ZN16 1313 aa18.62■□□□□ 0.57
SOD2-209ENST00000535561 C4AP0C0L4 1744 aa18.61■□□□□ 0.57
SOD2-209ENST00000535561 ALDH1L2Q3SY69 923 aa18.61■□□□□ 0.57
SOD2-209ENST00000535561 COPS6Q7L5N1 327 aa18.61■□□□□ 0.57
SOD2-209ENST00000535561 XAGE3Q8WTP9 111 aa18.61■□□□□ 0.57
SOD2-209ENST00000535561 DDX58O95786 925 aaKnown RBP18.6■□□□□ 0.57
SOD2-209ENST00000535561 SLC4A2P04920 1241 aa18.6■□□□□ 0.57
SOD2-209ENST00000535561 ARXQ96QS3 562 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms