RNA–Protein interactions for RNA: ENST00000535215.5

TSPAN11-202, Transcript of tetraspanin 11, humanhuman

TSL 2 BASIC

Gene TSPAN11, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN11-202ENST00000535215 RTCBQ9Y3I0 505 aaKnown RBP27.39■■□□□ 1.98
TSPAN11-202ENST00000535215 COL5A3P25940 1745 aaPredicted RBP27.38■■□□□ 1.97
TSPAN11-202ENST00000535215 TJP1Q07157 1748 aa27.38■■□□□ 1.97
TSPAN11-202ENST00000535215 PRAMEF22A3QJZ6 481 aa27.37■■□□□ 1.97
TSPAN11-202ENST00000535215 GNPATO15228 680 aa27.37■■□□□ 1.97
TSPAN11-202ENST00000535215 HOXB7P09629 217 aa27.37■■□□□ 1.97
TSPAN11-202ENST00000535215 E9PSI1 815 aa27.36■■□□□ 1.97
TSPAN11-202ENST00000535215 TSR2Q969E8 191 aaKnown RBP27.36■■□□□ 1.97
TSPAN11-202ENST00000535215 MYH14Q7Z406 1995 aaKnown RBP27.36■■□□□ 1.97
TSPAN11-202ENST00000535215 SOS1Q07889 1333 aaPredicted RBP27.36■■□□□ 1.97
TSPAN11-202ENST00000535215 SSFA2P28290 1259 aa27.35■■□□□ 1.97
TSPAN11-202ENST00000535215 TRAPPC3LQ5T215 181 aa27.35■■□□□ 1.97
TSPAN11-202ENST00000535215 DUSP27Q5VZP5 1158 aa27.35■■□□□ 1.97
TSPAN11-202ENST00000535215 SLFN5Q08AF3 891 aa27.34■■□□□ 1.97
TSPAN11-202ENST00000535215 SPINK5Q9NQ38 1064 aaPredicted RBP27.34■■□□□ 1.97
TSPAN11-202ENST00000535215 PSDA5PKW4 1024 aaPredicted RBP27.33■■□□□ 1.97
TSPAN11-202ENST00000535215 A1BGP04217 495 aa27.33■■□□□ 1.97
TSPAN11-202ENST00000535215 ADRA2BP18089 450 aa27.33■■□□□ 1.97
TSPAN11-202ENST00000535215 EIF2S2P20042 333 aaKnown RBP27.32■■□□□ 1.96
TSPAN11-202ENST00000535215 CANXP27824 592 aaKnown RBP27.32■■□□□ 1.96
TSPAN11-202ENST00000535215 KRT24Q2M2I5 525 aa27.32■■□□□ 1.96
TSPAN11-202ENST00000535215 NPM2Q86SE8 214 aaKnown RBP27.32■■□□□ 1.96
TSPAN11-202ENST00000535215 C8orf58Q8NAV2 365 aa27.32■■□□□ 1.96
TSPAN11-202ENST00000535215 FANCIQ9NVI1 1328 aa27.32■■□□□ 1.96
TSPAN11-202ENST00000535215 ZBTB1Q9Y2K1 713 aa27.31■■□□□ 1.96
TSPAN11-202ENST00000535215 UBR3Q6ZT12 1888 aa27.3■■□□□ 1.96
TSPAN11-202ENST00000535215 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.3■■□□□ 1.96
TSPAN11-202ENST00000535215 ELL2O00472 640 aaPredicted RBP27.3■■□□□ 1.96
TSPAN11-202ENST00000535215 IL6STP40189 918 aaPredicted RBP27.3■■□□□ 1.96
TSPAN11-202ENST00000535215 COL23A1Q86Y22 540 aaPredicted RBP27.3■■□□□ 1.96
TSPAN11-202ENST00000535215 SLC16A10Q8TF71 515 aa27.3■■□□□ 1.96
TSPAN11-202ENST00000535215 ERBB4Q15303 1308 aa27.3■■□□□ 1.96
TSPAN11-202ENST00000535215 PNPLA7Q6ZV29 1317 aa27.3■■□□□ 1.96
TSPAN11-202ENST00000535215 QSER1Q2KHR3 1735 aa27.3■■□□□ 1.96
TSPAN11-202ENST00000535215 MSH5O43196 834 aa27.29■■□□□ 1.96
TSPAN11-202ENST00000535215 TRMT2AQ8IZ69 625 aaKnown RBP27.29■■□□□ 1.96
TSPAN11-202ENST00000535215 A0A087WZG4 1122 aa27.28■■□□□ 1.96
TSPAN11-202ENST00000535215 RFC4P35249 363 aa27.28■■□□□ 1.96
TSPAN11-202ENST00000535215 EIF5P55010 431 aaKnown RBP27.28■■□□□ 1.96
TSPAN11-202ENST00000535215 ARHGEF1Q92888 912 aaKnown RBP27.28■■□□□ 1.96
TSPAN11-202ENST00000535215 CDCA7LQ96GN5 454 aa27.28■■□□□ 1.96
TSPAN11-202ENST00000535215 ZBED9Q6R2W3 1325 aa27.27■■□□□ 1.96
TSPAN11-202ENST00000535215 PHF14O94880 888 aa27.27■■□□□ 1.96
TSPAN11-202ENST00000535215 EXOSC9Q06265 439 aaKnown RBP27.27■■□□□ 1.96
TSPAN11-202ENST00000535215 TWISTNBQ3B726 338 aaPredicted RBP27.27■■□□□ 1.96
TSPAN11-202ENST00000535215 NBPF26B4DH59 902 aa27.26■■□□□ 1.95
TSPAN11-202ENST00000535215 HDGFL1Q5TGJ6 251 aa27.26■■□□□ 1.95
TSPAN11-202ENST00000535215 NBPF10Q6P3W6 841 aaKnown RBP27.26■■□□□ 1.95
TSPAN11-202ENST00000535215 NBPF15Q8N660 670 aa27.26■■□□□ 1.95
TSPAN11-202ENST00000535215 TSPYL6Q8N831 410 aa27.26■■□□□ 1.95
TSPAN11-202ENST00000535215 LAMB4A4D0S4 1761 aa27.25■■□□□ 1.95
TSPAN11-202ENST00000535215 CCDC30Q5VVM6 783 aa27.25■■□□□ 1.95
TSPAN11-202ENST00000535215 AMIGO3Q86WK7 504 aa27.25■■□□□ 1.95
TSPAN11-202ENST00000535215 SMIM5Q71RC9 77 aa27.24■■□□□ 1.95
TSPAN11-202ENST00000535215 DBF4Q9UBU7 674 aaPredicted RBP27.24■■□□□ 1.95
TSPAN11-202ENST00000535215 TUBGCP6Q96RT7 1819 aa27.24■■□□□ 1.95
TSPAN11-202ENST00000535215 VAMP4O75379 141 aa27.23■■□□□ 1.95
TSPAN11-202ENST00000535215 NECTIN2Q92692 538 aa27.23■■□□□ 1.95
TSPAN11-202ENST00000535215 DDX21Q9NR30 783 aaKnown RBP eCLIP27.23■■□□□ 1.95
TSPAN11-202ENST00000535215 ZPR1O75312 459 aa27.22■■□□□ 1.95
TSPAN11-202ENST00000535215 PDGFDQ9GZP0 370 aaPredicted RBP27.22■■□□□ 1.95
TSPAN11-202ENST00000535215 ZNF330Q9Y3S2 320 aaPredicted RBP27.22■■□□□ 1.95
TSPAN11-202ENST00000535215 PDIA6Q15084 440 aa27.21■■□□□ 1.95
TSPAN11-202ENST00000535215 MYL6BP14649 208 aa27.2■■□□□ 1.94
TSPAN11-202ENST00000535215 PIP4K2AP48426 406 aaPredicted RBP27.2■■□□□ 1.94
TSPAN11-202ENST00000535215 ARXQ96QS3 562 aa27.2■■□□□ 1.94
TSPAN11-202ENST00000535215 MTFR1LQ9H019 292 aa27.2■■□□□ 1.94
TSPAN11-202ENST00000535215 NARFQ9UHQ1 456 aa27.2■■□□□ 1.94
TSPAN11-202ENST00000535215 COL15A1P39059 1388 aa27.2■■□□□ 1.94
TSPAN11-202ENST00000535215 NLGN1Q8N2Q7 840 aa27.19■■□□□ 1.94
TSPAN11-202ENST00000535215 HYPKQ9NX55 129 aa27.19■■□□□ 1.94
TSPAN11-202ENST00000535215 CHPF2Q9P2E5 772 aa27.18■■□□□ 1.94
TSPAN11-202ENST00000535215 DZIP3Q86Y13 1208 aaKnown RBP27.17■■□□□ 1.94
TSPAN11-202ENST00000535215 STK31Q9BXU1 1019 aa27.17■■□□□ 1.94
TSPAN11-202ENST00000535215 TBC1D2BQ9UPU7 963 aa27.17■■□□□ 1.94
TSPAN11-202ENST00000535215 CT47B1P0C2W7 299 aaPredicted RBP27.16■■□□□ 1.94
TSPAN11-202ENST00000535215 ZNF428Q96B54 188 aa27.16■■□□□ 1.94
TSPAN11-202ENST00000535215 SPON1Q9HCB6 807 aa27.16■■□□□ 1.94
TSPAN11-202ENST00000535215 CASZ1Q86V15 1759 aa27.16■■□□□ 1.94
TSPAN11-202ENST00000535215 USP42Q9H9J4 1324 aaKnown RBP27.16■■□□□ 1.94
TSPAN11-202ENST00000535215 ZBTB7AO95365 584 aa27.15■■□□□ 1.94
TSPAN11-202ENST00000535215 CACNA1FO60840 1977 aa27.15■■□□□ 1.94
TSPAN11-202ENST00000535215 RGL2O15211 777 aa27.14■■□□□ 1.94
TSPAN11-202ENST00000535215 PROSER3Q2NL68 480 aa27.14■■□□□ 1.94
TSPAN11-202ENST00000535215 USPL1Q5W0Q7 1092 aa27.14■■□□□ 1.94
TSPAN11-202ENST00000535215 LRP10Q7Z4F1 713 aa27.14■■□□□ 1.94
TSPAN11-202ENST00000535215 ATF5Q9Y2D1 282 aaPredicted RBP27.14■■□□□ 1.94
TSPAN11-202ENST00000535215 ERVV-1B6SEH8 477 aa27.13■■□□□ 1.93
TSPAN11-202ENST00000535215 GYS1P13807 737 aa27.13■■□□□ 1.93
TSPAN11-202ENST00000535215 COPS6Q7L5N1 327 aa27.13■■□□□ 1.93
TSPAN11-202ENST00000535215 SRP68Q9UHB9 627 aaKnown RBP27.13■■□□□ 1.93
TSPAN11-202ENST00000535215 ANXA1P04083 346 aa27.12■■□□□ 1.93
TSPAN11-202ENST00000535215 SLC4A2P04920 1241 aa27.12■■□□□ 1.93
TSPAN11-202ENST00000535215 CLEC4GQ6UXB4 293 aa27.12■■□□□ 1.93
TSPAN11-202ENST00000535215 KIF6Q6ZMV9 814 aa27.12■■□□□ 1.93
TSPAN11-202ENST00000535215 CAMTA2O94983 1202 aa27.1■■□□□ 1.93
TSPAN11-202ENST00000535215 AIMP1Q12904 312 aaKnown RBP27.1■■□□□ 1.93
TSPAN11-202ENST00000535215 XAGE3Q8WTP9 111 aa27.1■■□□□ 1.93
TSPAN11-202ENST00000535215 ZNF652Q9Y2D9 606 aa27.1■■□□□ 1.93
TSPAN11-202ENST00000535215 C4AP0C0L4 1744 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms