RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 KIF7Q2M1P5 1343 aa28.92■■■□□ 2.22
SSH3-211ENST00000534112 C16orf71Q8IYS4 520 aaPredicted RBP28.91■■■□□ 2.22
SSH3-211ENST00000534112 ADAMTS7Q9UKP4 1686 aa28.9■■■□□ 2.22
SSH3-211ENST00000534112 ARFGEF1Q9Y6D6 1849 aa28.9■■■□□ 2.22
SSH3-211ENST00000534112 DIAPH1O60610 1272 aaKnown RBP28.9■■■□□ 2.22
SSH3-211ENST00000534112 VSIG10Q8N0Z9 540 aa28.9■■■□□ 2.22
SSH3-211ENST00000534112 MRC1P22897 1456 aa28.9■■■□□ 2.22
SSH3-211ENST00000534112 KDM2BQ8NHM5 1336 aa28.9■■■□□ 2.22
SSH3-211ENST00000534112 PER1O15534 1290 aaPredicted RBP28.89■■■□□ 2.22
SSH3-211ENST00000534112 BCL2L12Q9HB09 334 aa28.89■■■□□ 2.22
SSH3-211ENST00000534112 COL15A1P39059 1388 aa28.88■■■□□ 2.21
SSH3-211ENST00000534112 KCPQ6ZWJ8 1503 aa28.87■■■□□ 2.21
SSH3-211ENST00000534112 CC2D1BQ5T0F9 858 aaKnown RBP28.86■■■□□ 2.21
SSH3-211ENST00000534112 RRAGCQ9HB90 399 aa28.86■■■□□ 2.21
SSH3-211ENST00000534112 SERPINB2P05120 415 aa28.85■■■□□ 2.21
SSH3-211ENST00000534112 CANXP27824 592 aaKnown RBP28.85■■■□□ 2.21
SSH3-211ENST00000534112 FSTL1Q12841 308 aa28.85■■■□□ 2.21
SSH3-211ENST00000534112 STARD3NLO95772 234 aa28.82■■■□□ 2.2
SSH3-211ENST00000534112 RASSF7Q02833 373 aa28.82■■■□□ 2.2
SSH3-211ENST00000534112 HTRA3P83110 453 aa28.81■■■□□ 2.2
SSH3-211ENST00000534112 TTC5Q8N0Z6 440 aa28.81■■■□□ 2.2
SSH3-211ENST00000534112 TTLL6Q8N841 843 aa28.81■■■□□ 2.2
SSH3-211ENST00000534112 EIF5P55010 431 aaKnown RBP28.8■■■□□ 2.2
SSH3-211ENST00000534112 C2CD5Q86YS7 1000 aa28.8■■■□□ 2.2
SSH3-211ENST00000534112 ZC3H4Q9UPT8 1303 aaKnown RBP28.79■■■□□ 2.2
SSH3-211ENST00000534112 LMNB1P20700 586 aa28.79■■■□□ 2.2
SSH3-211ENST00000534112 A0A087WZG4 1122 aa28.78■■■□□ 2.2
SSH3-211ENST00000534112 PRELPP51888 382 aa28.78■■■□□ 2.2
SSH3-211ENST00000534112 BICDL1Q6ZP65 573 aa28.78■■■□□ 2.2
SSH3-211ENST00000534112 IL17REQ8NFR9 667 aa28.78■■■□□ 2.2
SSH3-211ENST00000534112 H0YIN7 160 aa28.77■■■□□ 2.2
SSH3-211ENST00000534112 ZNF496Q96IT1 587 aaPredicted RBP28.77■■■□□ 2.2
SSH3-211ENST00000534112 U2SURPO15042 1029 aaKnown RBP28.76■■■□□ 2.19
SSH3-211ENST00000534112 TEFQ10587 303 aa28.76■■■□□ 2.19
SSH3-211ENST00000534112 ZNF790Q6PG37 636 aa28.76■■■□□ 2.19
SSH3-211ENST00000534112 KLRG1Q96E93 195 aa28.76■■■□□ 2.19
SSH3-211ENST00000534112 CARMIL3Q8ND23 1372 aa28.75■■■□□ 2.19
SSH3-211ENST00000534112 NRXN2Q9P2S2 1712 aa28.74■■■□□ 2.19
SSH3-211ENST00000534112 GLTPD2A6NH11 291 aa28.74■■■□□ 2.19
SSH3-211ENST00000534112 GNAT3A8MTJ3 354 aa28.74■■■□□ 2.19
SSH3-211ENST00000534112 SMC1BQ8NDV3 1235 aa28.74■■■□□ 2.19
SSH3-211ENST00000534112 GAS2L2Q8NHY3 880 aa28.74■■■□□ 2.19
SSH3-211ENST00000534112 TEX13AQ9BXU3 409 aaPredicted RBP28.74■■■□□ 2.19
SSH3-211ENST00000534112 SBF1O95248 1867 aa28.74■■■□□ 2.19
SSH3-211ENST00000534112 AFDNP55196 1824 aaKnown RBP28.73■■■□□ 2.19
SSH3-211ENST00000534112 CNGB1Q14028 1251 aaPredicted RBP28.73■■■□□ 2.19
SSH3-211ENST00000534112 TBC1D9BQ66K14 1250 aa28.73■■■□□ 2.19
SSH3-211ENST00000534112 HEG1Q9ULI3 1381 aa28.73■■■□□ 2.19
SSH3-211ENST00000534112 JMYQ8N9B5 988 aa28.72■■■□□ 2.19
SSH3-211ENST00000534112 NFKBIEO00221 500 aa28.71■■■□□ 2.19
SSH3-211ENST00000534112 VEGFAP15692 232 aaPredicted RBP28.71■■■□□ 2.19
SSH3-211ENST00000534112 TBC1D2BQ9UPU7 963 aa28.71■■■□□ 2.19
SSH3-211ENST00000534112 ZNF330Q9Y3S2 320 aaPredicted RBP28.71■■■□□ 2.19
SSH3-211ENST00000534112 NPC1L1Q9UHC9 1359 aa28.71■■■□□ 2.19
SSH3-211ENST00000534112 WDR90Q96KV7 1748 aa28.7■■■□□ 2.19
SSH3-211ENST00000534112 BRIP1Q9BX63 1249 aa28.7■■■□□ 2.18
SSH3-211ENST00000534112 COL3A1P02461 1466 aaPredicted RBP28.7■■■□□ 2.18
SSH3-211ENST00000534112 IL6STP40189 918 aaPredicted RBP28.69■■■□□ 2.18
SSH3-211ENST00000534112 ZNF622Q969S3 477 aaKnown RBP eCLIP28.69■■■□□ 2.18
SSH3-211ENST00000534112 PDZRN3Q9UPQ7 1066 aa28.69■■■□□ 2.18
SSH3-211ENST00000534112 UBR2Q8IWV8 1755 aa28.69■■■□□ 2.18
SSH3-211ENST00000534112 PDE6BP35913 854 aa28.68■■■□□ 2.18
SSH3-211ENST00000534112 FMNL2Q96PY5 1086 aa28.68■■■□□ 2.18
SSH3-211ENST00000534112 VIRMAQ69YN4 1812 aaKnown RBP28.67■■■□□ 2.18
SSH3-211ENST00000534112 A1BGP04217 495 aa28.67■■■□□ 2.18
SSH3-211ENST00000534112 PRR5LQ6MZQ0 368 aa28.67■■■□□ 2.18
SSH3-211ENST00000534112 CCDC24Q8N4L8 307 aa28.67■■■□□ 2.18
SSH3-211ENST00000534112 TNRC6CQ9HCJ0 1690 aaKnown RBP28.67■■■□□ 2.18
SSH3-211ENST00000534112 PCNTO95613 3336 aa28.65■■■□□ 2.18
SSH3-211ENST00000534112 PHACTR3Q96KR7 559 aa28.65■■■□□ 2.18
SSH3-211ENST00000534112 CEMIPQ8WUJ3 1361 aa28.64■■■□□ 2.18
SSH3-211ENST00000534112 C21orf2O43822 256 aa28.64■■■□□ 2.18
SSH3-211ENST00000534112 NPM2Q86SE8 214 aaKnown RBP28.64■■■□□ 2.18
SSH3-211ENST00000534112 SETDB2Q96T68 719 aa28.64■■■□□ 2.18
SSH3-211ENST00000534112 ZNF219Q9P2Y4 722 aaPredicted RBP28.64■■■□□ 2.18
SSH3-211ENST00000534112 DLEC1Q9Y238 1755 aa28.64■■■□□ 2.18
SSH3-211ENST00000534112 KCNQ3O43525 872 aa28.63■■■□□ 2.17
SSH3-211ENST00000534112 CAMTA2O94983 1202 aa28.63■■■□□ 2.17
SSH3-211ENST00000534112 BTBD11A6QL63 1104 aa28.62■■■□□ 2.17
SSH3-211ENST00000534112 POTECB2RU33 542 aa28.62■■■□□ 2.17
SSH3-211ENST00000534112 DPY19L2Q6NUT2 758 aa28.62■■■□□ 2.17
SSH3-211ENST00000534112 PRKAR2BP31323 418 aa28.61■■■□□ 2.17
SSH3-211ENST00000534112 ERFEQ4G0M1 354 aa28.6■■■□□ 2.17
SSH3-211ENST00000534112 CNBD1Q8NA66 436 aa28.6■■■□□ 2.17
SSH3-211ENST00000534112 RSPH6AQ9H0K4 717 aa28.59■■■□□ 2.17
SSH3-211ENST00000534112 USP16Q9Y5T5 823 aa28.59■■■□□ 2.17
SSH3-211ENST00000534112 NPHP1O15259 732 aa28.58■■■□□ 2.17
SSH3-211ENST00000534112 COL13A1Q5TAT6 717 aaPredicted RBP28.58■■■□□ 2.17
SSH3-211ENST00000534112 DZIP3Q86Y13 1208 aaKnown RBP28.58■■■□□ 2.17
SSH3-211ENST00000534112 CNKSR1Q969H4 720 aa28.58■■■□□ 2.17
SSH3-211ENST00000534112 CFAP53Q96M91 514 aa28.58■■■□□ 2.17
SSH3-211ENST00000534112 SRGNP10124 158 aa28.56■■■□□ 2.16
SSH3-211ENST00000534112 ST5P78524 1137 aa28.56■■■□□ 2.16
SSH3-211ENST00000534112 STYK1Q6J9G0 422 aa28.56■■■□□ 2.16
SSH3-211ENST00000534112 TAOK3Q9H2K8 898 aa28.56■■■□□ 2.16
SSH3-211ENST00000534112 ANKRD31Q8N7Z5 1873 aa28.55■■■□□ 2.16
SSH3-211ENST00000534112 SCN7AQ01118 1682 aa28.55■■■□□ 2.16
SSH3-211ENST00000534112 LTBP3Q9NS15 1303 aa28.55■■■□□ 2.16
SSH3-211ENST00000534112 PIP4K2AP48426 406 aaPredicted RBP28.55■■■□□ 2.16
SSH3-211ENST00000534112 SIPA1L3O60292 1781 aaPredicted RBP28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms