RNA–Protein interactions for RNA: ENST00000533943.1

MRPL49-208, Transcript of mitochondrial ribosomal protein L49, humanhuman

TSL 3

Gene MRPL49, Length 688 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-208ENST00000533943 GPR162Q16538 588 aa21.32■■□□□ 1
MRPL49-208ENST00000533943 GOLGB1Q14789 3259 aaKnown RBP21.3■■□□□ 1
MRPL49-208ENST00000533943 ZPR1O75312 459 aa21.3■■□□□ 1
MRPL49-208ENST00000533943 CANXP27824 592 aaKnown RBP21.3■■□□□ 1
MRPL49-208ENST00000533943 FKBP8Q14318 412 aa21.3■■□□□ 1
MRPL49-208ENST00000533943 COL15A1P39059 1388 aa21.29■■□□□ 1
MRPL49-208ENST00000533943 ZNF316A6NFI3 1004 aaPredicted RBP21.29■■□□□ 1
MRPL49-208ENST00000533943 EIF5P55010 431 aaKnown RBP21.29■■□□□ 1
MRPL49-208ENST00000533943 PNISRQ8TF01 805 aaKnown RBP21.29■■□□□ 1
MRPL49-208ENST00000533943 NARFQ9UHQ1 456 aa21.29■■□□□ 1
MRPL49-208ENST00000533943 PARP3Q9Y6F1 533 aa21.29■■□□□ 1
MRPL49-208ENST00000533943 SNRPA1P09661 255 aaKnown RBP21.28■■□□□ 1
MRPL49-208ENST00000533943 YY1P25490 414 aa21.28■■□□□ 1
MRPL49-208ENST00000533943 WDR43Q15061 677 aaKnown RBP eCLIP21.28■■□□□ 1
MRPL49-208ENST00000533943 C4AP0C0L4 1744 aa21.28■■□□□ 1
MRPL49-208ENST00000533943 A0A087WZG4 1122 aa21.27■■□□□ 1
MRPL49-208ENST00000533943 USPL1Q5W0Q7 1092 aa21.27■■□□□ 1
MRPL49-208ENST00000533943 PELP1Q8IZL8 1130 aaKnown RBP21.27■■□□□ 1
MRPL49-208ENST00000533943 TM4SF1P30408 202 aa21.26■□□□□ 0.99
MRPL49-208ENST00000533943 IL6STP40189 918 aaPredicted RBP21.26■□□□□ 0.99
MRPL49-208ENST00000533943 RIPK4P57078 832 aa21.26■□□□□ 0.99
MRPL49-208ENST00000533943 MIS18AQ9NYP9 233 aa21.26■□□□□ 0.99
MRPL49-208ENST00000533943 A1BGP04217 495 aa21.25■□□□□ 0.99
MRPL49-208ENST00000533943 TMPOP42166 694 aaKnown RBP21.25■□□□□ 0.99
MRPL49-208ENST00000533943 THUMPD2Q9BTF0 503 aaKnown RBP21.25■□□□□ 0.99
MRPL49-208ENST00000533943 ADAMTS8Q9UP79 889 aa21.25■□□□□ 0.99
MRPL49-208ENST00000533943 USP16Q9Y5T5 823 aa21.25■□□□□ 0.99
MRPL49-208ENST00000533943 GRIN3BO60391 1043 aa21.24■□□□□ 0.99
MRPL49-208ENST00000533943 YBX3P16989 372 aaKnown RBP eCLIP21.24■□□□□ 0.99
MRPL49-208ENST00000533943 TGFB2P61812 414 aa21.24■□□□□ 0.99
MRPL49-208ENST00000533943 DDR1Q08345 913 aa21.24■□□□□ 0.99
MRPL49-208ENST00000533943 LMOD3Q0VAK6 560 aa21.24■□□□□ 0.99
MRPL49-208ENST00000533943 RUNDC1Q96C34 613 aa21.24■□□□□ 0.99
MRPL49-208ENST00000533943 C10orf71Q711Q0 1435 aa21.23■□□□□ 0.99
MRPL49-208ENST00000533943 PRAMEF22A3QJZ6 481 aa21.23■□□□□ 0.99
MRPL49-208ENST00000533943 CCDC146Q8IYE0 955 aa21.23■□□□□ 0.99
MRPL49-208ENST00000533943 BCL2L12Q9HB09 334 aa21.23■□□□□ 0.99
MRPL49-208ENST00000533943 POLRMTO00411 1230 aaKnown RBP21.22■□□□□ 0.99
MRPL49-208ENST00000533943 NFIXQ14938 502 aa21.21■□□□□ 0.99
MRPL49-208ENST00000533943 NPM2Q86SE8 214 aaKnown RBP21.21■□□□□ 0.99
MRPL49-208ENST00000533943 DLG5Q8TDM6 1919 aa21.21■□□□□ 0.99
MRPL49-208ENST00000533943 EIF4A1P60842 406 aaKnown RBP21.2■□□□□ 0.98
MRPL49-208ENST00000533943 BABAM1Q9NWV8 329 aa21.2■□□□□ 0.98
MRPL49-208ENST00000533943 ZNF330Q9Y3S2 320 aaPredicted RBP21.2■□□□□ 0.98
MRPL49-208ENST00000533943 GIGYF1O75420 1035 aaPredicted RBP21.19■□□□□ 0.98
MRPL49-208ENST00000533943 TBC1D2BQ9UPU7 963 aa21.19■□□□□ 0.98
MRPL49-208ENST00000533943 RRP7AQ9Y3A4 280 aaKnown RBP21.19■□□□□ 0.98
MRPL49-208ENST00000533943 PXDNLA1KZ92 1463 aa21.19■□□□□ 0.98
MRPL49-208ENST00000533943 A0A0G2JLW4 131 aa21.17■□□□□ 0.98
MRPL49-208ENST00000533943 NEUROD2Q15784 382 aa21.17■□□□□ 0.98
MRPL49-208ENST00000533943 TSPYL4Q9UJ04 414 aa21.17■□□□□ 0.98
MRPL49-208ENST00000533943 KIF13BQ9NQT8 1826 aa21.16■□□□□ 0.98
MRPL49-208ENST00000533943 NBPF26B4DH59 902 aa21.16■□□□□ 0.98
MRPL49-208ENST00000533943 CAMTA2O94983 1202 aa21.16■□□□□ 0.98
MRPL49-208ENST00000533943 DPEP1P16444 411 aa21.16■□□□□ 0.98
MRPL49-208ENST00000533943 PIP4K2AP48426 406 aaPredicted RBP21.16■□□□□ 0.98
MRPL49-208ENST00000533943 NBPF10Q6P3W6 841 aaKnown RBP21.16■□□□□ 0.98
MRPL49-208ENST00000533943 NBPF15Q8N660 670 aa21.16■□□□□ 0.98
MRPL49-208ENST00000533943 TRIM35Q9UPQ4 493 aa21.16■□□□□ 0.98
MRPL49-208ENST00000533943 SERPINB2P05120 415 aa21.15■□□□□ 0.98
MRPL49-208ENST00000533943 DZIP3Q86Y13 1208 aaKnown RBP21.15■□□□□ 0.98
MRPL49-208ENST00000533943 KDM3BQ7LBC6 1761 aa21.15■□□□□ 0.98
MRPL49-208ENST00000533943 TBC1D9BQ66K14 1250 aa21.14■□□□□ 0.97
MRPL49-208ENST00000533943 WWC3Q9ULE0 1092 aa21.14■□□□□ 0.97
MRPL49-208ENST00000533943 KCNA3P22001 575 aa21.13■□□□□ 0.97
MRPL49-208ENST00000533943 BICDL1Q6ZP65 573 aa21.13■□□□□ 0.97
MRPL49-208ENST00000533943 RGL2O15211 777 aa21.12■□□□□ 0.97
MRPL49-208ENST00000533943 ANP32CO43423 234 aa21.12■□□□□ 0.97
MRPL49-208ENST00000533943 CCDC184Q52MB2 194 aa21.12■□□□□ 0.97
MRPL49-208ENST00000533943 CLEC4GQ6UXB4 293 aa21.12■□□□□ 0.97
MRPL49-208ENST00000533943 CHL1O00533 1208 aa21.11■□□□□ 0.97
MRPL49-208ENST00000533943 KIAA1551Q9HCM1 1747 aa21.11■□□□□ 0.97
MRPL49-208ENST00000533943 SCN7AQ01118 1682 aa21.1■□□□□ 0.97
MRPL49-208ENST00000533943 APAF1O14727 1248 aa21.1■□□□□ 0.97
MRPL49-208ENST00000533943 SETDB2Q96T68 719 aa21.1■□□□□ 0.97
MRPL49-208ENST00000533943 PIM2Q9P1W9 311 aa21.1■□□□□ 0.97
MRPL49-208ENST00000533943 BCS1LQ9Y276 419 aa21.1■□□□□ 0.97
MRPL49-208ENST00000533943 ZNF652Q9Y2D9 606 aa21.1■□□□□ 0.97
MRPL49-208ENST00000533943 CHD4Q14839 1912 aa21.1■□□□□ 0.97
MRPL49-208ENST00000533943 CARMIL3Q8ND23 1372 aa21.1■□□□□ 0.97
MRPL49-208ENST00000533943 ZNF784Q8NCA9 323 aaPredicted RBP21.09■□□□□ 0.97
MRPL49-208ENST00000533943 ERBB4Q15303 1308 aa21.08■□□□□ 0.97
MRPL49-208ENST00000533943 CHRNA5P30532 468 aa21.08■□□□□ 0.97
MRPL49-208ENST00000533943 NRXN2Q9P2S2 1712 aa21.08■□□□□ 0.97
MRPL49-208ENST00000533943 DALRD3Q5D0E6 543 aaKnown RBP21.07■□□□□ 0.96
MRPL49-208ENST00000533943 LAMB4A4D0S4 1761 aa21.07■□□□□ 0.96
MRPL49-208ENST00000533943 N4BP2Q86UW6 1770 aaPredicted RBP21.06■□□□□ 0.96
MRPL49-208ENST00000533943 CFAP44Q96MT7 982 aa21.06■□□□□ 0.96
MRPL49-208ENST00000533943 ERVV-1B6SEH8 477 aa21.05■□□□□ 0.96
MRPL49-208ENST00000533943 PRR5LQ6MZQ0 368 aa21.05■□□□□ 0.96
MRPL49-208ENST00000533943 BRIP1Q9BX63 1249 aa21.05■□□□□ 0.96
MRPL49-208ENST00000533943 MRS2Q9HD23 443 aa21.05■□□□□ 0.96
MRPL49-208ENST00000533943 LAS1LQ9Y4W2 734 aaKnown RBP21.05■□□□□ 0.96
MRPL49-208ENST00000533943 CNBD1Q8NA66 436 aa21.04■□□□□ 0.96
MRPL49-208ENST00000533943 PDZRN3Q9UPQ7 1066 aa21.04■□□□□ 0.96
MRPL49-208ENST00000533943 AFDNP55196 1824 aaKnown RBP21.04■□□□□ 0.96
MRPL49-208ENST00000533943 BCORQ6W2J9 1755 aa21.03■□□□□ 0.96
MRPL49-208ENST00000533943 MYL6BP14649 208 aa21.03■□□□□ 0.96
MRPL49-208ENST00000533943 EIF2S2P20042 333 aaKnown RBP21.03■□□□□ 0.96
MRPL49-208ENST00000533943 CALD1Q05682 793 aaKnown RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms