RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 RHPN1Q8TCX5 695 aa19.47■□□□□ 0.71
ATP2C1-224ENST00000533801 VIRMAQ69YN4 1812 aaKnown RBP19.47■□□□□ 0.71
ATP2C1-224ENST00000533801 RABEP1Q15276 862 aa19.46■□□□□ 0.71
ATP2C1-224ENST00000533801 MCTP1Q6DN14 999 aa19.46■□□□□ 0.71
ATP2C1-224ENST00000533801 GBP4Q96PP9 640 aa19.46■□□□□ 0.71
ATP2C1-224ENST00000533801 SPG7Q9UQ90 795 aa19.46■□□□□ 0.71
ATP2C1-224ENST00000533801 CCDC8Q9H0W5 538 aaPredicted RBP19.45■□□□□ 0.7
ATP2C1-224ENST00000533801 PRDM11Q9NQV5 511 aa19.45■□□□□ 0.7
ATP2C1-224ENST00000533801 GIGYF1O75420 1035 aaPredicted RBP19.45■□□□□ 0.7
ATP2C1-224ENST00000533801 TOM1L2Q6ZVM7 507 aa19.45■□□□□ 0.7
ATP2C1-224ENST00000533801 PALD1Q9ULE6 856 aa19.45■□□□□ 0.7
ATP2C1-224ENST00000533801 MYD88Q99836 296 aa19.44■□□□□ 0.7
ATP2C1-224ENST00000533801 KIF24Q5T7B8 1368 aa19.44■□□□□ 0.7
ATP2C1-224ENST00000533801 GOLGA6L3A6NEY3 463 aa19.44■□□□□ 0.7
ATP2C1-224ENST00000533801 IFIT2P09913 472 aaKnown RBP19.44■□□□□ 0.7
ATP2C1-224ENST00000533801 KCNJ4P48050 445 aa19.44■□□□□ 0.7
ATP2C1-224ENST00000533801 BEND3Q5T5X7 828 aa19.44■□□□□ 0.7
ATP2C1-224ENST00000533801 COPS6Q7L5N1 327 aa19.43■□□□□ 0.7
ATP2C1-224ENST00000533801 XAGE3Q8WTP9 111 aa19.43■□□□□ 0.7
ATP2C1-224ENST00000533801 PXDNQ92626 1479 aa19.43■□□□□ 0.7
ATP2C1-224ENST00000533801 MCCP23508 829 aa19.43■□□□□ 0.7
ATP2C1-224ENST00000533801 SNX21Q969T3 373 aa19.43■□□□□ 0.7
ATP2C1-224ENST00000533801 AACSQ86V21 672 aa19.43■□□□□ 0.7
ATP2C1-224ENST00000533801 ZNF496Q96IT1 587 aaPredicted RBP19.43■□□□□ 0.7
ATP2C1-224ENST00000533801 ERBB3P21860 1342 aa19.42■□□□□ 0.7
ATP2C1-224ENST00000533801 PANK2Q9BZ23 570 aa19.42■□□□□ 0.7
ATP2C1-224ENST00000533801 USP16Q9Y5T5 823 aa19.42■□□□□ 0.7
ATP2C1-224ENST00000533801 CABP4P57796 275 aa19.41■□□□□ 0.7
ATP2C1-224ENST00000533801 ESYT1Q9BSJ8 1104 aa19.41■□□□□ 0.7
ATP2C1-224ENST00000533801 CLASRPQ8N2M8 674 aaKnown RBP19.41■□□□□ 0.7
ATP2C1-224ENST00000533801 IL25Q9H293 177 aa19.41■□□□□ 0.7
ATP2C1-224ENST00000533801 GOLGA6L22H0YM25 854 aa19.41■□□□□ 0.7
ATP2C1-224ENST00000533801 ZNF790Q6PG37 636 aa19.41■□□□□ 0.7
ATP2C1-224ENST00000533801 KIAA1211Q6ZU35 1233 aa19.41■□□□□ 0.7
ATP2C1-224ENST00000533801 DDX49Q9Y6V7 483 aaKnown RBP19.41■□□□□ 0.7
ATP2C1-224ENST00000533801 NEXNQ0ZGT2 675 aa19.4■□□□□ 0.7
ATP2C1-224ENST00000533801 FMN2Q9NZ56 1722 aa19.4■□□□□ 0.7
ATP2C1-224ENST00000533801 CPA1P15085 419 aa19.4■□□□□ 0.7
ATP2C1-224ENST00000533801 CHMLP26374 656 aa19.4■□□□□ 0.7
ATP2C1-224ENST00000533801 CCDC85AQ96PX6 553 aaPredicted RBP19.4■□□□□ 0.7
ATP2C1-224ENST00000533801 NALCNQ8IZF0 1738 aa19.4■□□□□ 0.7
ATP2C1-224ENST00000533801 DDX11L8A8MPP1 907 aa19.4■□□□□ 0.7
ATP2C1-224ENST00000533801 DDX58O95786 925 aaKnown RBP19.4■□□□□ 0.7
ATP2C1-224ENST00000533801 KIF1BPQ96EK5 621 aa19.4■□□□□ 0.7
ATP2C1-224ENST00000533801 DIAPH3Q9NSV4 1193 aa19.4■□□□□ 0.7
ATP2C1-224ENST00000533801 NDUFB9Q9Y6M9 179 aa19.4■□□□□ 0.7
ATP2C1-224ENST00000533801 XRN1Q8IZH2 1706 aaKnown RBP19.39■□□□□ 0.69
ATP2C1-224ENST00000533801 G3BP1Q13283 466 aaKnown RBP eCLIP19.39■□□□□ 0.69
ATP2C1-224ENST00000533801 KSR2Q6VAB6 950 aa19.39■□□□□ 0.69
ATP2C1-224ENST00000533801 EVA1CP58658 441 aa19.39■□□□□ 0.69
ATP2C1-224ENST00000533801 BICC1Q9H694 974 aaKnown RBP19.39■□□□□ 0.69
ATP2C1-224ENST00000533801 IBTKQ9P2D0 1353 aaPredicted RBP19.39■□□□□ 0.69
ATP2C1-224ENST00000533801 SUCLG2Q96I99 432 aa19.38■□□□□ 0.69
ATP2C1-224ENST00000533801 AK9Q5TCS8 1911 aa19.38■□□□□ 0.69
ATP2C1-224ENST00000533801 BOLA2Q9H3K6 86 aa19.38■□□□□ 0.69
ATP2C1-224ENST00000533801 SSH3Q8TE77 659 aa19.38■□□□□ 0.69
ATP2C1-224ENST00000533801 UBE3BQ7Z3V4 1068 aa19.37■□□□□ 0.69
ATP2C1-224ENST00000533801 ADCY9O60503 1353 aa19.36■□□□□ 0.69
ATP2C1-224ENST00000533801 IFNL2Q8IZJ0 200 aa19.36■□□□□ 0.69
ATP2C1-224ENST00000533801 RGPD1P0DJD0 1748 aa19.36■□□□□ 0.69
ATP2C1-224ENST00000533801 CEMIPQ8WUJ3 1361 aa19.36■□□□□ 0.69
ATP2C1-224ENST00000533801 SYTL4Q96C24 671 aaPredicted RBP19.36■□□□□ 0.69
ATP2C1-224ENST00000533801 CADPS2Q86UW7 1296 aa19.36■□□□□ 0.69
ATP2C1-224ENST00000533801 NWD1Q149M9 1564 aa19.35■□□□□ 0.69
ATP2C1-224ENST00000533801 NPHP3Q7Z494 1330 aa19.35■□□□□ 0.69
ATP2C1-224ENST00000533801 C1orf167Q5SNV9 1468 aa19.35■□□□□ 0.69
ATP2C1-224ENST00000533801 GRM8O00222 908 aa19.35■□□□□ 0.69
ATP2C1-224ENST00000533801 CNTROBQ8N137 903 aa19.35■□□□□ 0.69
ATP2C1-224ENST00000533801 SLC52A2Q9HAB3 445 aa19.35■□□□□ 0.69
ATP2C1-224ENST00000533801 TAOK2Q9UL54 1235 aa19.35■□□□□ 0.69
ATP2C1-224ENST00000533801 LTN1O94822 1766 aa19.35■□□□□ 0.69
ATP2C1-224ENST00000533801 PRPF40AO75400 957 aaKnown RBP19.35■□□□□ 0.69
ATP2C1-224ENST00000533801 PHKG2P15735 406 aa19.35■□□□□ 0.69
ATP2C1-224ENST00000533801 RAB3GAP1Q15042 981 aa19.35■□□□□ 0.69
ATP2C1-224ENST00000533801 ZBTB3Q9H5J0 574 aa19.35■□□□□ 0.69
ATP2C1-224ENST00000533801 HYPKQ9NX55 129 aa19.35■□□□□ 0.69
ATP2C1-224ENST00000533801 EDC3Q96F86 508 aaKnown RBP19.34■□□□□ 0.69
ATP2C1-224ENST00000533801 RGPD2P0DJD1 1756 aa19.34■□□□□ 0.69
ATP2C1-224ENST00000533801 CYP27B1O15528 508 aa19.34■□□□□ 0.69
ATP2C1-224ENST00000533801 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.34■□□□□ 0.69
ATP2C1-224ENST00000533801 TMX3Q96JJ7 454 aa19.33■□□□□ 0.69
ATP2C1-224ENST00000533801 DDX21Q9NR30 783 aaKnown RBP eCLIP19.33■□□□□ 0.68
ATP2C1-224ENST00000533801 TLR7Q9NYK1 1049 aaKnown RBP19.33■□□□□ 0.68
ATP2C1-224ENST00000533801 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.33■□□□□ 0.68
ATP2C1-224ENST00000533801 CAVIN1Q6NZI2 390 aaKnown RBP19.32■□□□□ 0.68
ATP2C1-224ENST00000533801 TCEANC2Q96MN5 208 aa19.32■□□□□ 0.68
ATP2C1-224ENST00000533801 GDPD2Q9HCC8 539 aa19.32■□□□□ 0.68
ATP2C1-224ENST00000533801 BABAM1Q9NWV8 329 aa19.32■□□□□ 0.68
ATP2C1-224ENST00000533801 CHMP4AQ9BY43 222 aa19.32■□□□□ 0.68
ATP2C1-224ENST00000533801 BAG4O95429 457 aaKnown RBP19.32■□□□□ 0.68
ATP2C1-224ENST00000533801 ANKRD13DQ6ZTN6 518 aa19.32■□□□□ 0.68
ATP2C1-224ENST00000533801 DNAJC2Q99543 621 aaKnown RBP19.32■□□□□ 0.68
ATP2C1-224ENST00000533801 RAB11FIP3O75154 756 aa19.31■□□□□ 0.68
ATP2C1-224ENST00000533801 L1TD1Q5T7N2 865 aaKnown RBP19.31■□□□□ 0.68
ATP2C1-224ENST00000533801 NEUROD6Q96NK8 337 aa19.31■□□□□ 0.68
ATP2C1-224ENST00000533801 XRCC6P12956 609 aaKnown RBP eCLIP19.31■□□□□ 0.68
ATP2C1-224ENST00000533801 LINS1Q8NG48 757 aa19.31■□□□□ 0.68
ATP2C1-224ENST00000533801 GPATCH3Q96I76 525 aa19.31■□□□□ 0.68
ATP2C1-224ENST00000533801 FSD1Q9BTV5 496 aa19.31■□□□□ 0.68
ATP2C1-224ENST00000533801 A0A087WZG4 1122 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms