RNA–Protein interactions for RNA: ENST00000533361.1

SIPA1-208, Transcript of signal-induced proliferation-associated 1, human

TSL 4

Gene SIPA1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1-208	ENST00000533361	ARHGEF1	Q92888	912 aa	Known RBP	29.28	■■■□□ 2.28
SIPA1-208	ENST00000533361	MYH14	Q7Z406	1995 aa	Known RBP	29.26	■■■□□ 2.28
SIPA1-208	ENST00000533361	KLHL34	Q8N239	644 aa		29.26	■■■□□ 2.27
SIPA1-208	ENST00000533361	CIC	Q96RK0	1608 aa	Predicted RBP	29.26	■■■□□ 2.27
SIPA1-208	ENST00000533361	CANX	P27824	592 aa	Known RBP	29.24	■■■□□ 2.27
SIPA1-208	ENST00000533361	FHDC1	Q9C0D6	1143 aa	Predicted RBP	29.23	■■■□□ 2.27
SIPA1-208	ENST00000533361	ZBTB1	Q9Y2K1	713 aa		29.23	■■■□□ 2.27
SIPA1-208	ENST00000533361	SNRPA1	P09661	255 aa	Known RBP	29.22	■■■□□ 2.27
SIPA1-208	ENST00000533361	APAF1	O14727	1248 aa		29.21	■■■□□ 2.27
SIPA1-208	ENST00000533361	TSPYL4	Q9UJ04	414 aa		29.2	■■■□□ 2.26
SIPA1-208	ENST00000533361	SOS1	Q07889	1333 aa	Predicted RBP	29.2	■■■□□ 2.26
SIPA1-208	ENST00000533361	TRIM35	Q9UPQ4	493 aa		29.19	■■■□□ 2.26
SIPA1-208	ENST00000533361	ZNF330	Q9Y3S2	320 aa	Predicted RBP	29.19	■■■□□ 2.26
SIPA1-208	ENST00000533361	USP16	Q9Y5T5	823 aa		29.19	■■■□□ 2.26
SIPA1-208	ENST00000533361	PRAMEF22	A3QJZ6	481 aa		29.18	■■■□□ 2.26
SIPA1-208	ENST00000533361	ZPR1	O75312	459 aa		29.18	■■■□□ 2.26
SIPA1-208	ENST00000533361	NPM2	Q86SE8	214 aa	Known RBP	29.18	■■■□□ 2.26
SIPA1-208	ENST00000533361	NLGN1	Q8N2Q7	840 aa		29.18	■■■□□ 2.26
SIPA1-208	ENST00000533361	SRP68	Q9UHB9	627 aa	Known RBP	29.18	■■■□□ 2.26
SIPA1-208	ENST00000533361	LAS1L	Q9Y4W2	734 aa	Known RBP	29.18	■■■□□ 2.26
SIPA1-208	ENST00000533361	COL24A1	Q17RW2	1714 aa		29.17	■■■□□ 2.26
SIPA1-208	ENST00000533361	A1BG	P04217	495 aa		29.17	■■■□□ 2.26
SIPA1-208	ENST00000533361	SYT17	Q9BSW7	474 aa		29.17	■■■□□ 2.26
SIPA1-208	ENST00000533361	DCAF8L1	A6NGE4	600 aa		29.16	■■■□□ 2.26
SIPA1-208	ENST00000533361	COL15A1	P39059	1388 aa		29.15	■■■□□ 2.26
SIPA1-208	ENST00000533361	GYS1	P13807	737 aa		29.15	■■■□□ 2.26
SIPA1-208	ENST00000533361	EIF4A1	P60842	406 aa	Known RBP	29.15	■■■□□ 2.26
SIPA1-208	ENST00000533361	USP42	Q9H9J4	1324 aa	Known RBP	29.14	■■■□□ 2.25
SIPA1-208	ENST00000533361		A0A087WZG4	1122 aa		29.13	■■■□□ 2.25
SIPA1-208	ENST00000533361	MMP10	P09238	476 aa		29.13	■■■□□ 2.25
SIPA1-208	ENST00000533361	USPL1	Q5W0Q7	1092 aa		29.13	■■■□□ 2.25
SIPA1-208	ENST00000533361	BABAM1	Q9NWV8	329 aa		29.13	■■■□□ 2.25
SIPA1-208	ENST00000533361	KDM3B	Q7LBC6	1761 aa		29.12	■■■□□ 2.25
SIPA1-208	ENST00000533361	SENP3-EIF4A1	A0A087X0R7	540 aa		29.12	■■■□□ 2.25
SIPA1-208	ENST00000533361	C4A	P0C0L4	1744 aa		29.11	■■■□□ 2.25
SIPA1-208	ENST00000533361	IL6ST	P40189	918 aa	Predicted RBP	29.11	■■■□□ 2.25
SIPA1-208	ENST00000533361	PIP4K2A	P48426	406 aa	Predicted RBP	29.11	■■■□□ 2.25
SIPA1-208	ENST00000533361	EIF5	P55010	431 aa	Known RBP	29.11	■■■□□ 2.25
SIPA1-208	ENST00000533361	FAM9B	Q8IZU0	186 aa		29.11	■■■□□ 2.25
SIPA1-208	ENST00000533361	NARF	Q9UHQ1	456 aa		29.11	■■■□□ 2.25
SIPA1-208	ENST00000533361	GIGYF1	O75420	1035 aa	Predicted RBP	29.09	■■■□□ 2.25
SIPA1-208	ENST00000533361	FKBP8	Q14318	412 aa		29.09	■■■□□ 2.25
SIPA1-208	ENST00000533361	PARP3	Q9Y6F1	533 aa		29.08	■■■□□ 2.25
SIPA1-208	ENST00000533361	TBC1D2B	Q9UPU7	963 aa		29.07	■■■□□ 2.24
SIPA1-208	ENST00000533361	CHL1	O00533	1208 aa		29.06	■■■□□ 2.24
SIPA1-208	ENST00000533361	CALD1	Q05682	793 aa	Known RBP	29.06	■■■□□ 2.24
SIPA1-208	ENST00000533361	CD2AP	Q9Y5K6	639 aa		29.04	■■■□□ 2.24
SIPA1-208	ENST00000533361	NLGN2	Q8NFZ4	835 aa		29.03	■■■□□ 2.24
SIPA1-208	ENST00000533361	CFAP44	Q96MT7	982 aa		29.03	■■■□□ 2.24
SIPA1-208	ENST00000533361	UTRN	P46939	3433 aa		29.03	■■■□□ 2.24
SIPA1-208	ENST00000533361	NBPF26	B4DH59	902 aa		29.02	■■■□□ 2.24
SIPA1-208	ENST00000533361	EIF2S2	P20042	333 aa	Known RBP	29.02	■■■□□ 2.24
SIPA1-208	ENST00000533361	NBPF10	Q6P3W6	841 aa	Known RBP	29.02	■■■□□ 2.24
SIPA1-208	ENST00000533361	DZIP3	Q86Y13	1208 aa	Known RBP	29.02	■■■□□ 2.24
SIPA1-208	ENST00000533361	NBPF15	Q8N660	670 aa		29.02	■■■□□ 2.24
SIPA1-208	ENST00000533361	NGEF	Q8N5V2	710 aa		29.01	■■■□□ 2.23
SIPA1-208	ENST00000533361	SALL2	Q9Y467	1007 aa	Predicted RBP	29.01	■■■□□ 2.23
SIPA1-208	ENST00000533361	GNAI1	P63096	354 aa		29	■■■□□ 2.23
SIPA1-208	ENST00000533361	BICDL1	Q6ZP65	573 aa		29	■■■□□ 2.23
SIPA1-208	ENST00000533361	PELP1	Q8IZL8	1130 aa	Known RBP	29	■■■□□ 2.23
SIPA1-208	ENST00000533361	BCL2L12	Q9HB09	334 aa		29	■■■□□ 2.23
SIPA1-208	ENST00000533361	LAMB4	A4D0S4	1761 aa		28.99	■■■□□ 2.23
SIPA1-208	ENST00000533361	TM4SF1	P30408	202 aa		28.99	■■■□□ 2.23
SIPA1-208	ENST00000533361	IFT57	Q9NWB7	429 aa		28.99	■■■□□ 2.23
SIPA1-208	ENST00000533361	MYL6B	P14649	208 aa		28.98	■■■□□ 2.23
SIPA1-208	ENST00000533361	DDR1	Q08345	913 aa		28.98	■■■□□ 2.23
SIPA1-208	ENST00000533361	NFIX	Q14938	502 aa		28.98	■■■□□ 2.23
SIPA1-208	ENST00000533361	MBIP	Q9NS73	344 aa		28.98	■■■□□ 2.23
SIPA1-208	ENST00000533361	KRT24	Q2M2I5	525 aa		28.97	■■■□□ 2.23
SIPA1-208	ENST00000533361	CAMTA2	O94983	1202 aa		28.96	■■■□□ 2.23
SIPA1-208	ENST00000533361	GPR162	Q16538	588 aa		28.96	■■■□□ 2.23
SIPA1-208	ENST00000533361	CCDC27	Q2M243	656 aa		28.96	■■■□□ 2.23
SIPA1-208	ENST00000533361	NECTIN2	Q92692	538 aa		28.96	■■■□□ 2.23
SIPA1-208	ENST00000533361	POLRMT	O00411	1230 aa	Known RBP	28.95	■■■□□ 2.22
SIPA1-208	ENST00000533361	ZNF853	P0CG23	659 aa		28.95	■■■□□ 2.22
SIPA1-208	ENST00000533361	DIEXF	Q68CQ4	756 aa	Known RBP	28.95	■■■□□ 2.22
SIPA1-208	ENST00000533361	WWC1	Q8IX03	1113 aa		28.95	■■■□□ 2.22
SIPA1-208	ENST00000533361	TBC1D9B	Q66K14	1250 aa		28.93	■■■□□ 2.22
SIPA1-208	ENST00000533361	ERBB4	Q15303	1308 aa		28.93	■■■□□ 2.22
SIPA1-208	ENST00000533361	SERPINB2	P05120	415 aa		28.92	■■■□□ 2.22
SIPA1-208	ENST00000533361	ZNF652	Q9Y2D9	606 aa		28.92	■■■□□ 2.22
SIPA1-208	ENST00000533361	NCBP3	Q53F19	620 aa	Known RBP	28.91	■■■□□ 2.22
SIPA1-208	ENST00000533361	CCER2	I3L3R5	266 aa		28.9	■■■□□ 2.22
SIPA1-208	ENST00000533361	DUSP27	Q5VZP5	1158 aa		28.9	■■■□□ 2.22
SIPA1-208	ENST00000533361	KIF6	Q6ZMV9	814 aa		28.9	■■■□□ 2.22
SIPA1-208	ENST00000533361	SETDB2	Q96T68	719 aa		28.9	■■■□□ 2.22
SIPA1-208	ENST00000533361	HDGFL1	Q5TGJ6	251 aa		28.89	■■■□□ 2.22
SIPA1-208	ENST00000533361	WWC3	Q9ULE0	1092 aa		28.89	■■■□□ 2.22
SIPA1-208	ENST00000533361	SCN7A	Q01118	1682 aa		28.89	■■■□□ 2.21
SIPA1-208	ENST00000533361	C10orf71	Q711Q0	1435 aa		28.88	■■■□□ 2.21
SIPA1-208	ENST00000533361	ELL2	O00472	640 aa	Predicted RBP	28.88	■■■□□ 2.21
SIPA1-208	ENST00000533361	ANXA1	P04083	346 aa		28.88	■■■□□ 2.21
SIPA1-208	ENST00000533361	TGFB2	P61812	414 aa		28.88	■■■□□ 2.21
SIPA1-208	ENST00000533361	CLEC4G	Q6UXB4	293 aa		28.88	■■■□□ 2.21
SIPA1-208	ENST00000533361	ZNF784	Q8NCA9	323 aa	Predicted RBP	28.88	■■■□□ 2.21
SIPA1-208	ENST00000533361	NPHP1	O15259	732 aa		28.87	■■■□□ 2.21
SIPA1-208	ENST00000533361	HOXB7	P09629	217 aa		28.87	■■■□□ 2.21
SIPA1-208	ENST00000533361	TTLL7	Q6ZT98	887 aa		28.87	■■■□□ 2.21
SIPA1-208	ENST00000533361		A0A0G2JLW4	131 aa		28.86	■■■□□ 2.21
SIPA1-208	ENST00000533361	PDIA6	Q15084	440 aa		28.86	■■■□□ 2.21

Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms