RNA–Protein interactions for RNA: ENST00000533361.1

SIPA1-208, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 4

Gene SIPA1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-208ENST00000533361 NISCHQ9Y2I1 1504 aa53.88■■■■■ 6.22
SIPA1-208ENST00000533361 CCDC180Q9P1Z9 1646 aa47.88■■■■■ 5.25
SIPA1-208ENST00000533361 ABCC9O60706 1549 aa47.05■■■■■ 5.12
SIPA1-208ENST00000533361 DCAF8L2P0C7V8 631 aa45.33■■■■■ 4.85
SIPA1-208ENST00000533361 RB1CC1Q8TDY2 1594 aa45.16■■■■■ 4.82
SIPA1-208ENST00000533361 NACADO15069 1562 aa45.07■■■■■ 4.8
SIPA1-208ENST00000533361 ZCCHC6Q5VYS8 1495 aaKnown RBP44.85■■■■■ 4.77
SIPA1-208ENST00000533361 MYO15BQ96JP2 1530 aa44.7■■■■■ 4.75
SIPA1-208ENST00000533361 DCAF1Q9Y4B6 1507 aa44.51■■■■■ 4.72
SIPA1-208ENST00000533361 DNAJC5BQ9UF47 199 aa44.15■■■■■ 4.66
SIPA1-208ENST00000533361 UNC13AQ9UPW8 1703 aa44.07■■■■■ 4.65
SIPA1-208ENST00000533361 PABPN1Q86U42 306 aaKnown RBP eCLIP44.02■■■■■ 4.64
SIPA1-208ENST00000533361 SCRIBQ14160 1630 aa43.79■■■■■ 4.6
SIPA1-208ENST00000533361 BICRAQ9NZM4 1560 aa43.74■■■■■ 4.59
SIPA1-208ENST00000533361 SHROOM4Q9ULL8 1493 aa43.23■■■■■ 4.51
SIPA1-208ENST00000533361 EIF4G1Q04637 1599 aaKnown RBP42.62■■■■■ 4.41
SIPA1-208ENST00000533361 CC2D2AQ9P2K1 1620 aa42.49■■■■■ 4.39
SIPA1-208ENST00000533361 CECR2Q9BXF3 1484 aa42.24■■■■■ 4.35
SIPA1-208ENST00000533361 SMARCA4P51532 1647 aa41.82■■■■■ 4.29
SIPA1-208ENST00000533361 BAZ1AQ9NRL2 1556 aaPredicted RBP41.78■■■■■ 4.28
SIPA1-208ENST00000533361 ATAD2BQ9ULI0 1458 aa41.62■■■■■ 4.25
SIPA1-208ENST00000533361 NCAPD3P42695 1498 aa41.59■■■■■ 4.25
SIPA1-208ENST00000533361 SMARCA2P51531 1590 aa41.57■■■■■ 4.25
SIPA1-208ENST00000533361 MROH2BQ7Z745 1585 aa41.54■■■■■ 4.24
SIPA1-208ENST00000533361 HMGXB3Q12766 1538 aa41.34■■■■■ 4.21
SIPA1-208ENST00000533361 PEG3Q9GZU2 1588 aa41.34■■■■■ 4.21
SIPA1-208ENST00000533361 BAZ1BQ9UIG0 1483 aaKnown RBP41.32■■■■■ 4.2
SIPA1-208ENST00000533361 WIZO95785 1651 aa41.11■■■■■ 4.17
SIPA1-208ENST00000533361 RSF1Q96T23 1441 aaPredicted RBP41.06■■■■■ 4.16
SIPA1-208ENST00000533361 DNAJC5Q9H3Z4 198 aa40.81■■■■■ 4.12
SIPA1-208ENST00000533361 NESP48681 1621 aa40.67■■■■■ 4.1
SIPA1-208ENST00000533361 TOP2AP11388 1531 aaKnown RBP40.64■■■■■ 4.1
SIPA1-208ENST00000533361 ERCC6Q03468 1493 aa40.58■■■■■ 4.09
SIPA1-208ENST00000533361 LAMC3Q9Y6N6 1575 aa40.5■■■■■ 4.07
SIPA1-208ENST00000533361 CADPSQ9ULU8 1353 aa40.42■■■■■ 4.06
SIPA1-208ENST00000533361 CUX2O14529 1486 aa40.33■■■■■ 4.05
SIPA1-208ENST00000533361 PDS5BQ9NTI5 1447 aa40.3■■■■■ 4.04
SIPA1-208ENST00000533361 CCDC88BA6NC98 1476 aa40.21■■■■■ 4.03
SIPA1-208ENST00000533361 SUPT5HO00267 1087 aaKnown RBP40.19■■■■■ 4.02
SIPA1-208ENST00000533361 KIF21AQ7Z4S6 1674 aa40.15■■■■■ 4.02
SIPA1-208ENST00000533361 CFTRP13569 1480 aa40.13■■■■■ 4.01
SIPA1-208ENST00000533361 THOC2Q8NI27 1593 aaKnown RBP39.97■■■■□ 3.99
SIPA1-208ENST00000533361 FANCD2Q9BXW9 1451 aa39.96■■■■□ 3.99
SIPA1-208ENST00000533361 CEP164Q9UPV0 1460 aa39.92■■■■□ 3.98
SIPA1-208ENST00000533361 MRC2Q9UBG0 1479 aa39.86■■■■□ 3.97
SIPA1-208ENST00000533361 PRDM2Q13029 1718 aa39.78■■■■□ 3.96
SIPA1-208ENST00000533361 WDR62O43379 1518 aa39.67■■■■□ 3.94
SIPA1-208ENST00000533361 URB2Q14146 1524 aaKnown RBP39.54■■■■□ 3.92
SIPA1-208ENST00000533361 ABCC8Q09428 1581 aa39.3■■■■□ 3.88
SIPA1-208ENST00000533361 TOPBP1Q92547 1522 aa39.3■■■■□ 3.88
SIPA1-208ENST00000533361 DNMBPQ6XZF7 1577 aa39.24■■■■□ 3.87
SIPA1-208ENST00000533361 IFT140Q96RY7 1462 aa39.07■■■■□ 3.85
SIPA1-208ENST00000533361 CUX1P39880 1505 aa38.97■■■■□ 3.83
SIPA1-208ENST00000533361 POLA1P09884 1462 aaPredicted RBP38.95■■■■□ 3.83
SIPA1-208ENST00000533361 ZNF608Q9ULD9 1512 aaPredicted RBP38.91■■■■□ 3.82
SIPA1-208ENST00000533361 FGD5Q6ZNL6 1462 aa38.88■■■■□ 3.81
SIPA1-208ENST00000533361 SOGA1O94964 1423 aa38.87■■■■□ 3.81
SIPA1-208ENST00000533361 TRIM41Q8WV44 630 aa38.85■■■■□ 3.81
SIPA1-208ENST00000533361 RAD54L2Q9Y4B4 1467 aa38.85■■■■□ 3.81
SIPA1-208ENST00000533361 TARBP1Q13395 1621 aaKnown RBP38.82■■■■□ 3.81
SIPA1-208ENST00000533361 WRNQ14191 1432 aaPredicted RBP eCLIP38.75■■■■□ 3.79
SIPA1-208ENST00000533361 AQRO60306 1485 aaKnown RBP eCLIP38.73■■■■□ 3.796e-6■□□□□ 11.2
SIPA1-208ENST00000533361 EIF4G3O43432 1585 aaKnown RBP38.72■■■■□ 3.79
SIPA1-208ENST00000533361 TDRD9Q8NDG6 1382 aaKnown RBP38.67■■■■□ 3.78
SIPA1-208ENST00000533361 SYNJ1O43426 1573 aa38.61■■■■□ 3.77
SIPA1-208ENST00000533361 TOP2BQ02880 1626 aa38.61■■■■□ 3.77
SIPA1-208ENST00000533361 BIVM-ERCC5R4GMW8 1640 aa38.59■■■■□ 3.77
SIPA1-208ENST00000533361 OSCARQ8IYS5 282 aa38.53■■■■□ 3.76
SIPA1-208ENST00000533361 WDR97A6NE52 1622 aa38.49■■■■□ 3.75
SIPA1-208ENST00000533361 ABCA10Q8WWZ4 1543 aa38.46■■■■□ 3.75
SIPA1-208ENST00000533361 FBLN2P98095 1184 aa38.41■■■■□ 3.74
SIPA1-208ENST00000533361 GAPVD1Q14C86 1478 aa38.39■■■■□ 3.74
SIPA1-208ENST00000533361 GRIN2BQ13224 1484 aa38.38■■■■□ 3.73
SIPA1-208ENST00000533361 SNAPC4Q5SXM2 1469 aa38.34■■■■□ 3.73
SIPA1-208ENST00000533361 ABCA5Q8WWZ7 1642 aa38.28■■■■□ 3.72
SIPA1-208ENST00000533361 PBRM1Q86U86 1689 aa38.26■■■■□ 3.71
SIPA1-208ENST00000533361 CHD1O14646 1710 aa38.26■■■■□ 3.71
SIPA1-208ENST00000533361 MAGI1Q96QZ7 1491 aaPredicted RBP38.25■■■■□ 3.71
SIPA1-208ENST00000533361 CHMP7Q8WUX9 453 aaPredicted RBP38.24■■■■□ 3.71
SIPA1-208ENST00000533361 SYNJ2O15056 1496 aa38.12■■■■□ 3.69
SIPA1-208ENST00000533361 ERICH3Q5RHP9 1530 aa38■■■■□ 3.67
SIPA1-208ENST00000533361 RIMBP3CA6NJZ7 1639 aa38■■■■□ 3.67
SIPA1-208ENST00000533361 RIMBP3BA6NNM3 1639 aa38■■■■□ 3.67
SIPA1-208ENST00000533361 RIMBP3Q9UFD9 1639 aa38■■■■□ 3.67
SIPA1-208ENST00000533361 KIF27Q86VH2 1401 aa37.96■■■■□ 3.67
SIPA1-208ENST00000533361 ADAMTS12P58397 1594 aa37.94■■■■□ 3.66
SIPA1-208ENST00000533361 FHAD1B1AJZ9 1412 aa37.93■■■■□ 3.66
SIPA1-208ENST00000533361 GRIN2AQ12879 1464 aa37.86■■■■□ 3.65
SIPA1-208ENST00000533361 ARHGEF11O15085 1522 aa37.83■■■■□ 3.65
SIPA1-208ENST00000533361 CLASP1Q7Z460 1538 aa37.8■■■■□ 3.64
SIPA1-208ENST00000533361 IGF1RP08069 1367 aa37.8■■■■□ 3.64
SIPA1-208ENST00000533361 NUP160Q12769 1436 aa37.67■■■■□ 3.62
SIPA1-208ENST00000533361 CEP170Q5SW79 1584 aa37.66■■■■□ 3.62
SIPA1-208ENST00000533361 CUL7Q14999 1698 aa37.65■■■■□ 3.62
SIPA1-208ENST00000533361 CARMIL1Q5VZK9 1371 aa37.61■■■■□ 3.61
SIPA1-208ENST00000533361 RUSC2Q8N2Y8 1516 aa37.6■■■■□ 3.61
SIPA1-208ENST00000533361 CYB5RLQ6IPT4 315 aa37.59■■■■□ 3.61
SIPA1-208ENST00000533361 ARAP1Q96P48 1450 aa37.48■■■■□ 3.59
SIPA1-208ENST00000533361 JPH4Q96JJ6 628 aa37.4■■■■□ 3.58
SIPA1-208ENST00000533361 CHIC1Q5VXU3 224 aa37.39■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms