RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 RTCBQ9Y3I0 505 aaKnown RBP15.67■□□□□ 0.1
SSBP3-214ENST00000533209 LAS1LQ9Y4W2 734 aaKnown RBP15.67■□□□□ 0.1
SSBP3-214ENST00000533209 QSER1Q2KHR3 1735 aa15.67■□□□□ 0.1
SSBP3-214ENST00000533209 GIGYF1O75420 1035 aaPredicted RBP15.66■□□□□ 0.1
SSBP3-214ENST00000533209 ZBTB7AO95365 584 aa15.66■□□□□ 0.1
SSBP3-214ENST00000533209 CALD1Q05682 793 aaKnown RBP15.66■□□□□ 0.1
SSBP3-214ENST00000533209 USP16Q9Y5T5 823 aa15.66■□□□□ 0.1
SSBP3-214ENST00000533209 MYH14Q7Z406 1995 aaKnown RBP15.66■□□□□ 0.1
SSBP3-214ENST00000533209 UBR3Q6ZT12 1888 aa15.65■□□□□ 0.1
SSBP3-214ENST00000533209 SLC16A10Q8TF71 515 aa15.65■□□□□ 0.1
SSBP3-214ENST00000533209 IFT57Q9NWB7 429 aa15.65■□□□□ 0.1
SSBP3-214ENST00000533209 ZBTB1Q9Y2K1 713 aa15.65■□□□□ 0.1
SSBP3-214ENST00000533209 SALL2Q9Y467 1007 aaPredicted RBP15.65■□□□□ 0.1
SSBP3-214ENST00000533209 MSH5O43196 834 aa15.64■□□□□ 0.09
SSBP3-214ENST00000533209 ADRA2BP18089 450 aa15.64■□□□□ 0.09
SSBP3-214ENST00000533209 GNAI1P63096 354 aa15.64■□□□□ 0.09
SSBP3-214ENST00000533209 NGEFQ8N5V2 710 aa15.64■□□□□ 0.09
SSBP3-214ENST00000533209 MTFR1LQ9H019 292 aa15.64■□□□□ 0.09
SSBP3-214ENST00000533209 MBIPQ9NS73 344 aa15.64■□□□□ 0.09
SSBP3-214ENST00000533209 ATF5Q9Y2D1 282 aaPredicted RBP15.64■□□□□ 0.09
SSBP3-214ENST00000533209 SOS1Q07889 1333 aaPredicted RBP15.64■□□□□ 0.09
SSBP3-214ENST00000533209 A1BGP04217 495 aa15.63■□□□□ 0.09
SSBP3-214ENST00000533209 TRAPPC3LQ5T215 181 aa15.63■□□□□ 0.09
SSBP3-214ENST00000533209 ARHGEF1Q92888 912 aaKnown RBP15.63■□□□□ 0.09
SSBP3-214ENST00000533209 SPON1Q9HCB6 807 aa15.63■□□□□ 0.09
SSBP3-214ENST00000533209 CANXP27824 592 aaKnown RBP15.62■□□□□ 0.09
SSBP3-214ENST00000533209 KRT24Q2M2I5 525 aa15.62■□□□□ 0.09
SSBP3-214ENST00000533209 WDR63Q8IWG1 891 aa15.62■□□□□ 0.09
SSBP3-214ENST00000533209 IL16Q14005 1332 aa15.62■□□□□ 0.09
SSBP3-214ENST00000533209 PTGER2P43116 358 aa15.61■□□□□ 0.09
SSBP3-214ENST00000533209 EIF5P55010 431 aaKnown RBP15.61■□□□□ 0.09
SSBP3-214ENST00000533209 SGIP1Q9BQI5 828 aa15.61■□□□□ 0.09
SSBP3-214ENST00000533209 NBPF26B4DH59 902 aa15.6■□□□□ 0.09
SSBP3-214ENST00000533209 PIP4K2AP48426 406 aaPredicted RBP15.6■□□□□ 0.09
SSBP3-214ENST00000533209 NBPF10Q6P3W6 841 aaKnown RBP15.6■□□□□ 0.09
SSBP3-214ENST00000533209 NBPF15Q8N660 670 aa15.6■□□□□ 0.09
SSBP3-214ENST00000533209 ZNF521Q96K83 1311 aa15.6■□□□□ 0.09
SSBP3-214ENST00000533209 COL15A1P39059 1388 aa15.6■□□□□ 0.09
SSBP3-214ENST00000533209 LRP5O75197 1615 aa15.59■□□□□ 0.09
SSBP3-214ENST00000533209 RFC4P35249 363 aa15.59■□□□□ 0.09
SSBP3-214ENST00000533209 IL6STP40189 918 aaPredicted RBP15.59■□□□□ 0.09
SSBP3-214ENST00000533209 MSL1Q68DK7 614 aa15.59■□□□□ 0.09
SSBP3-214ENST00000533209 TSR2Q969E8 191 aaKnown RBP15.59■□□□□ 0.09
SSBP3-214ENST00000533209 SPINK5Q9NQ38 1064 aaPredicted RBP15.58■□□□□ 0.08
SSBP3-214ENST00000533209 SRP68Q9UHB9 627 aaKnown RBP15.58■□□□□ 0.08
SSBP3-214ENST00000533209 USP42Q9H9J4 1324 aaKnown RBP15.58■□□□□ 0.08
SSBP3-214ENST00000533209 HOXB7P09629 217 aa15.57■□□□□ 0.08
SSBP3-214ENST00000533209 GYS1P13807 737 aa15.57■□□□□ 0.08
SSBP3-214ENST00000533209 DUSP27Q5VZP5 1158 aa15.57■□□□□ 0.08
SSBP3-214ENST00000533209 C8orf58Q8NAV2 365 aa15.57■□□□□ 0.08
SSBP3-214ENST00000533209 LAMB4A4D0S4 1761 aa15.57■□□□□ 0.08
SSBP3-214ENST00000533209 A0A087WZG4 1122 aa15.56■□□□□ 0.08
SSBP3-214ENST00000533209 EIF2S2P20042 333 aaKnown RBP15.56■□□□□ 0.08
SSBP3-214ENST00000533209 NARFQ9UHQ1 456 aa15.56■□□□□ 0.08
SSBP3-214ENST00000533209 ZNF330Q9Y3S2 320 aaPredicted RBP15.56■□□□□ 0.08
SSBP3-214ENST00000533209 C4AP0C0L4 1744 aa15.55■□□□□ 0.08
SSBP3-214ENST00000533209 COL24A1Q17RW2 1714 aa15.55■□□□□ 0.08
SSBP3-214ENST00000533209 ERBB4Q15303 1308 aa15.55■□□□□ 0.08
SSBP3-214ENST00000533209 FANCIQ9NVI1 1328 aa15.55■□□□□ 0.08
SSBP3-214ENST00000533209 ZPR1O75312 459 aa15.55■□□□□ 0.08
SSBP3-214ENST00000533209 PDIA6Q15084 440 aa15.55■□□□□ 0.08
SSBP3-214ENST00000533209 USPL1Q5W0Q7 1092 aa15.55■□□□□ 0.08
SSBP3-214ENST00000533209 NECTIN2Q92692 538 aa15.55■□□□□ 0.08
SSBP3-214ENST00000533209 ELL2O00472 640 aaPredicted RBP15.54■□□□□ 0.08
SSBP3-214ENST00000533209 POLD1P28340 1107 aa15.54■□□□□ 0.08
SSBP3-214ENST00000533209 FKBP8Q14318 412 aa15.54■□□□□ 0.08
SSBP3-214ENST00000533209 NLGN1Q8N2Q7 840 aa15.54■□□□□ 0.08
SSBP3-214ENST00000533209 TSPYL6Q8N831 410 aa15.54■□□□□ 0.08
SSBP3-214ENST00000533209 BCL2L12Q9HB09 334 aa15.54■□□□□ 0.08
SSBP3-214ENST00000533209 TBC1D2BQ9UPU7 963 aa15.54■□□□□ 0.08
SSBP3-214ENST00000533209 CAMTA2O94983 1202 aa15.53■□□□□ 0.08
SSBP3-214ENST00000533209 MYL6BP14649 208 aa15.53■□□□□ 0.08
SSBP3-214ENST00000533209 PROSER3Q2NL68 480 aa15.53■□□□□ 0.08
SSBP3-214ENST00000533209 HDGFL1Q5TGJ6 251 aa15.53■□□□□ 0.08
SSBP3-214ENST00000533209 LRP10Q7Z4F1 713 aa15.53■□□□□ 0.08
SSBP3-214ENST00000533209 NPM2Q86SE8 214 aaKnown RBP15.53■□□□□ 0.08
SSBP3-214ENST00000533209 DZIP3Q86Y13 1208 aaKnown RBP15.53■□□□□ 0.08
SSBP3-214ENST00000533209 ARXQ96QS3 562 aa15.53■□□□□ 0.08
SSBP3-214ENST00000533209 ANXA1P04083 346 aa15.52■□□□□ 0.08
SSBP3-214ENST00000533209 GOLGA2Q08379 1002 aa15.52■□□□□ 0.08
SSBP3-214ENST00000533209 MYH16Q9H6N6 1097 aa15.52■□□□□ 0.08
SSBP3-214ENST00000533209 PPP1R1BQ9UD71 204 aaPredicted RBP15.52■□□□□ 0.08
SSBP3-214ENST00000533209 MMP10P09238 476 aa15.51■□□□□ 0.07
SSBP3-214ENST00000533209 DDX21Q9NR30 783 aaKnown RBP eCLIP15.51■□□□□ 0.07
SSBP3-214ENST00000533209 CHPF2Q9P2E5 772 aa15.51■□□□□ 0.07
SSBP3-214ENST00000533209 TM4SF1P30408 202 aa15.5■□□□□ 0.07
SSBP3-214ENST00000533209 EXOSC9Q06265 439 aaKnown RBP15.5■□□□□ 0.07
SSBP3-214ENST00000533209 TTLL7Q6ZT98 887 aa15.5■□□□□ 0.07
SSBP3-214ENST00000533209 E9PSI1 815 aa15.49■□□□□ 0.07
SSBP3-214ENST00000533209 DDR1Q08345 913 aa15.49■□□□□ 0.07
SSBP3-214ENST00000533209 SLFN5Q08AF3 891 aa15.49■□□□□ 0.07
SSBP3-214ENST00000533209 NFIXQ14938 502 aa15.49■□□□□ 0.07
SSBP3-214ENST00000533209 TWISTNBQ3B726 338 aaPredicted RBP15.49■□□□□ 0.07
SSBP3-214ENST00000533209 CDCA7LQ96GN5 454 aa15.49■□□□□ 0.07
SSBP3-214ENST00000533209 DBF4Q9UBU7 674 aaPredicted RBP15.49■□□□□ 0.07
SSBP3-214ENST00000533209 SCN7AQ01118 1682 aa15.48■□□□□ 0.07
SSBP3-214ENST00000533209 HNRNPUQ00839 825 aaKnown RBP eCLIP15.48■□□□□ 0.07
SSBP3-214ENST00000533209 TBC1D9BQ66K14 1250 aa15.48■□□□□ 0.07
SSBP3-214ENST00000533209 FHDC1Q9C0D6 1143 aaPredicted RBP15.48■□□□□ 0.07
SSBP3-214ENST00000533209 MAP3K15Q6ZN16 1313 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms