RNA–Protein interactions for RNA: ENST00000533161.5

RPS2-213, Transcript of ribosomal protein S2, human

TSL 1 (best)

Gene RPS2, Length 1,186 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS2-213	ENST00000533161	USPL1	Q5W0Q7	1092 aa		32.39	■■■□□ 2.78
RPS2-213	ENST00000533161	COL15A1	P39059	1388 aa		32.39	■■■□□ 2.78
RPS2-213	ENST00000533161	TIAM2	Q8IVF5	1701 aa		32.39	■■■□□ 2.78
RPS2-213	ENST00000533161	RNF181	Q9P0P0	153 aa		32.38	■■■□□ 2.77
RPS2-213	ENST00000533161	SIPA1L3	O60292	1781 aa	Predicted RBP	32.37	■■■□□ 2.77
RPS2-213	ENST00000533161	RNMT	O43148	476 aa	Known RBP	32.37	■■■□□ 2.77
RPS2-213	ENST00000533161	CYP19A1	P11511	503 aa	Predicted RBP	32.37	■■■□□ 2.77
RPS2-213	ENST00000533161	RBM46	Q8TBY0	533 aa	Known RBP	32.37	■■■□□ 2.77
RPS2-213	ENST00000533161	HMOX1	P09601	288 aa		32.36	■■■□□ 2.77
RPS2-213	ENST00000533161	SLC39A6	Q13433	755 aa		32.36	■■■□□ 2.77
RPS2-213	ENST00000533161	DNAJC5G	Q8N7S2	189 aa		32.36	■■■□□ 2.77
RPS2-213	ENST00000533161	KDM2B	Q8NHM5	1336 aa		32.35	■■■□□ 2.77
RPS2-213	ENST00000533161	SCN7A	Q01118	1682 aa		32.35	■■■□□ 2.77
RPS2-213	ENST00000533161	C16orf71	Q8IYS4	520 aa	Predicted RBP	32.34	■■■□□ 2.77
RPS2-213	ENST00000533161	ZBTB1	Q9Y2K1	713 aa		32.34	■■■□□ 2.77
RPS2-213	ENST00000533161	ANKRD31	Q8N7Z5	1873 aa		32.33	■■■□□ 2.77
RPS2-213	ENST00000533161	NARF	Q9UHQ1	456 aa		32.33	■■■□□ 2.77
RPS2-213	ENST00000533161	NFIX	Q14938	502 aa		32.32	■■■□□ 2.76
RPS2-213	ENST00000533161	KIF7	Q2M1P5	1343 aa		32.31	■■■□□ 2.76
RPS2-213	ENST00000533161	MTHFSD	Q2M296	383 aa	Known RBP	32.3	■■■□□ 2.76
RPS2-213	ENST00000533161	VSIG10	Q8N0Z9	540 aa		32.29	■■■□□ 2.76
RPS2-213	ENST00000533161	FSTL1	Q12841	308 aa		32.28	■■■□□ 2.76
RPS2-213	ENST00000533161	BCL2L12	Q9HB09	334 aa		32.28	■■■□□ 2.76
RPS2-213	ENST00000533161	COL11A2	P13942	1736 aa	Predicted RBP	32.28	■■■□□ 2.76
RPS2-213	ENST00000533161	COL3A1	P02461	1466 aa	Predicted RBP	32.28	■■■□□ 2.76
RPS2-213	ENST00000533161	RASSF7	Q02833	373 aa		32.27	■■■□□ 2.76
RPS2-213	ENST00000533161	DIAPH1	O60610	1272 aa	Known RBP	32.26	■■■□□ 2.75
RPS2-213	ENST00000533161	ZC3H4	Q9UPT8	1303 aa	Known RBP	32.26	■■■□□ 2.75
RPS2-213	ENST00000533161	CARMIL3	Q8ND23	1372 aa		32.25	■■■□□ 2.75
RPS2-213	ENST00000533161	CCER1	Q8TC90	406 aa	Predicted RBP	32.25	■■■□□ 2.75
RPS2-213	ENST00000533161	RRAGC	Q9HB90	399 aa		32.25	■■■□□ 2.75
RPS2-213	ENST00000533161	DICER1	Q9UPY3	1922 aa	Known RBP	32.25	■■■□□ 2.75
RPS2-213	ENST00000533161	SERPINB2	P05120	415 aa		32.24	■■■□□ 2.75
RPS2-213	ENST00000533161	CACNA1S	Q13698	1873 aa		32.24	■■■□□ 2.75
RPS2-213	ENST00000533161	HTRA3	P83110	453 aa		32.22	■■■□□ 2.75
RPS2-213	ENST00000533161	FER1L6	Q2WGJ9	1857 aa		32.22	■■■□□ 2.75
RPS2-213	ENST00000533161	BCOR	Q6W2J9	1755 aa		32.22	■■■□□ 2.75
RPS2-213	ENST00000533161	PER1	O15534	1290 aa	Predicted RBP	32.21	■■■□□ 2.75
RPS2-213	ENST00000533161	CANX	P27824	592 aa	Known RBP	32.21	■■■□□ 2.75
RPS2-213	ENST00000533161	CC2D1B	Q5T0F9	858 aa	Known RBP	32.2	■■■□□ 2.75
RPS2-213	ENST00000533161	TTC5	Q8N0Z6	440 aa		32.2	■■■□□ 2.75
RPS2-213	ENST00000533161	LMNB1	P20700	586 aa		32.19	■■■□□ 2.74
RPS2-213	ENST00000533161	PRELP	P51888	382 aa		32.19	■■■□□ 2.74
RPS2-213	ENST00000533161	TTLL6	Q8N841	843 aa		32.19	■■■□□ 2.74
RPS2-213	ENST00000533161	KLRG1	Q96E93	195 aa		32.19	■■■□□ 2.74
RPS2-213	ENST00000533161	ARFGEF2	Q9Y6D5	1785 aa		32.18	■■■□□ 2.74
RPS2-213	ENST00000533161	EIF5	P55010	431 aa	Known RBP	32.18	■■■□□ 2.74
RPS2-213	ENST00000533161	C2CD5	Q86YS7	1000 aa		32.18	■■■□□ 2.74
RPS2-213	ENST00000533161	PCNT	O95613	3336 aa		32.18	■■■□□ 2.74
RPS2-213	ENST00000533161	STARD3NL	O95772	234 aa		32.17	■■■□□ 2.74
RPS2-213	ENST00000533161	SMC1B	Q8NDV3	1235 aa		32.16	■■■□□ 2.74
RPS2-213	ENST00000533161	HEG1	Q9ULI3	1381 aa		32.16	■■■□□ 2.74
RPS2-213	ENST00000533161	BICDL1	Q6ZP65	573 aa		32.15	■■■□□ 2.74
RPS2-213	ENST00000533161		A0A087WZG4	1122 aa		32.14	■■■□□ 2.74
RPS2-213	ENST00000533161		H0YIN7	160 aa		32.14	■■■□□ 2.74
RPS2-213	ENST00000533161	JMY	Q8N9B5	988 aa		32.14	■■■□□ 2.74
RPS2-213	ENST00000533161	ZNF496	Q96IT1	587 aa	Predicted RBP	32.14	■■■□□ 2.74
RPS2-213	ENST00000533161	NFKBIE	O00221	500 aa		32.13	■■■□□ 2.73
RPS2-213	ENST00000533161	NPC1L1	Q9UHC9	1359 aa		32.13	■■■□□ 2.73
RPS2-213	ENST00000533161	GLTPD2	A6NH11	291 aa		32.12	■■■□□ 2.73
RPS2-213	ENST00000533161	TEF	Q10587	303 aa		32.12	■■■□□ 2.73
RPS2-213	ENST00000533161	ZNF790	Q6PG37	636 aa		32.12	■■■□□ 2.73
RPS2-213	ENST00000533161	TBC1D9B	Q66K14	1250 aa		32.11	■■■□□ 2.73
RPS2-213	ENST00000533161	IL17RE	Q8NFR9	667 aa		32.11	■■■□□ 2.73
RPS2-213	ENST00000533161	GNAT3	A8MTJ3	354 aa		32.1	■■■□□ 2.73
RPS2-213	ENST00000533161	U2SURP	O15042	1029 aa	Known RBP	32.1	■■■□□ 2.73
RPS2-213	ENST00000533161	GAS2L2	Q8NHY3	880 aa		32.1	■■■□□ 2.73
RPS2-213	ENST00000533161	SLX4	Q8IY92	1834 aa		32.08	■■■□□ 2.73
RPS2-213	ENST00000533161	VEGFA	P15692	232 aa	Predicted RBP	32.08	■■■□□ 2.73
RPS2-213	ENST00000533161	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.08	■■■□□ 2.73
RPS2-213	ENST00000533161	CEMIP	Q8WUJ3	1361 aa		32.07	■■■□□ 2.73
RPS2-213	ENST00000533161	ZNF330	Q9Y3S2	320 aa	Predicted RBP	32.07	■■■□□ 2.72
RPS2-213	ENST00000533161	IL6ST	P40189	918 aa	Predicted RBP	32.06	■■■□□ 2.72
RPS2-213	ENST00000533161	PRR5L	Q6MZQ0	368 aa		32.06	■■■□□ 2.72
RPS2-213	ENST00000533161	TBC1D2B	Q9UPU7	963 aa		32.06	■■■□□ 2.72
RPS2-213	ENST00000533161	PDE6B	P35913	854 aa		32.05	■■■□□ 2.72
RPS2-213	ENST00000533161	BRIP1	Q9BX63	1249 aa		32.05	■■■□□ 2.72
RPS2-213	ENST00000533161	PDZRN3	Q9UPQ7	1066 aa		32.05	■■■□□ 2.72
RPS2-213	ENST00000533161	ZNF622	Q969S3	477 aa	Known RBP eCLIP	32.04	■■■□□ 2.72
RPS2-213	ENST00000533161	FMNL2	Q96PY5	1086 aa		32.04	■■■□□ 2.72
RPS2-213	ENST00000533161	CNGB1	Q14028	1251 aa	Predicted RBP	32.02	■■■□□ 2.72
RPS2-213	ENST00000533161	CCDC24	Q8N4L8	307 aa		32.02	■■■□□ 2.72
RPS2-213	ENST00000533161	C21orf2	O43822	256 aa		32	■■■□□ 2.71
RPS2-213	ENST00000533161	A1BG	P04217	495 aa		32	■■■□□ 2.71
RPS2-213	ENST00000533161	CAMTA2	O94983	1202 aa		31.99	■■■□□ 2.71
RPS2-213	ENST00000533161	CNBD1	Q8NA66	436 aa		31.99	■■■□□ 2.71
RPS2-213	ENST00000533161	ZNF219	Q9P2Y4	722 aa	Predicted RBP	31.99	■■■□□ 2.71
RPS2-213	ENST00000533161	POTEC	B2RU33	542 aa		31.98	■■■□□ 2.71
RPS2-213	ENST00000533161	COL13A1	Q5TAT6	717 aa	Predicted RBP	31.98	■■■□□ 2.71
RPS2-213	ENST00000533161	LTBP3	Q9NS15	1303 aa		31.98	■■■□□ 2.71
RPS2-213	ENST00000533161	DPY19L2	Q6NUT2	758 aa		31.97	■■■□□ 2.71
RPS2-213	ENST00000533161	NPM2	Q86SE8	214 aa	Known RBP	31.97	■■■□□ 2.71
RPS2-213	ENST00000533161	SETDB2	Q96T68	719 aa		31.97	■■■□□ 2.71
RPS2-213	ENST00000533161	LAMB4	A4D0S4	1761 aa		31.96	■■■□□ 2.71
RPS2-213	ENST00000533161	BTBD11	A6QL63	1104 aa		31.96	■■■□□ 2.71
RPS2-213	ENST00000533161	KCNQ3	O43525	872 aa		31.96	■■■□□ 2.71
RPS2-213	ENST00000533161	PRKAR2B	P31323	418 aa		31.96	■■■□□ 2.71
RPS2-213	ENST00000533161	ERFE	Q4G0M1	354 aa		31.96	■■■□□ 2.71
RPS2-213	ENST00000533161	PHACTR3	Q96KR7	559 aa		31.96	■■■□□ 2.71
RPS2-213	ENST00000533161	RSPH6A	Q9H0K4	717 aa		31.95	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms