RNA–Protein interactions for RNA: ENST00000533105.1

NDUFS3-210, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4

Gene NDUFS3, Length 567 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-210ENST00000533105 ZPR1O75312 459 aa29.07■■■□□ 2.24
NDUFS3-210ENST00000533105 MAPK8IP3Q9UPT6 1336 aa29.07■■■□□ 2.24
NDUFS3-210ENST00000533105 FKBP8Q14318 412 aa29.06■■■□□ 2.24
NDUFS3-210ENST00000533105 TEX13AQ9BXU3 409 aaPredicted RBP29.06■■■□□ 2.24
NDUFS3-210ENST00000533105 PARP3Q9Y6F1 533 aa29.06■■■□□ 2.24
NDUFS3-210ENST00000533105 YBX3P16989 372 aaKnown RBP eCLIP29.05■■■□□ 2.24
NDUFS3-210ENST00000533105 COL15A1P39059 1388 aa29.04■■■□□ 2.24
NDUFS3-210ENST00000533105 NFE2L2Q16236 605 aa29.04■■■□□ 2.24
NDUFS3-210ENST00000533105 USPL1Q5W0Q7 1092 aa29.04■■■□□ 2.24
NDUFS3-210ENST00000533105 WWC3Q9ULE0 1092 aa29.04■■■□□ 2.24
NDUFS3-210ENST00000533105 TAF7Q15545 349 aaPredicted RBP29.01■■■□□ 2.23
NDUFS3-210ENST00000533105 NARFQ9UHQ1 456 aa29.01■■■□□ 2.23
NDUFS3-210ENST00000533105 ZNF330Q9Y3S2 320 aaPredicted RBP29.01■■■□□ 2.23
NDUFS3-210ENST00000533105 GRIN3BO60391 1043 aa29■■■□□ 2.23
NDUFS3-210ENST00000533105 MIS18AQ9NYP9 233 aa28.99■■■□□ 2.23
NDUFS3-210ENST00000533105 GOLGB1Q14789 3259 aaKnown RBP28.98■■■□□ 2.23
NDUFS3-210ENST00000533105 DDR1Q08345 913 aa28.98■■■□□ 2.23
NDUFS3-210ENST00000533105 PRKRIP1Q9H875 184 aaPredicted RBP28.98■■■□□ 2.23
NDUFS3-210ENST00000533105 A1BGP04217 495 aa28.97■■■□□ 2.23
NDUFS3-210ENST00000533105 EIF5P55010 431 aaKnown RBP28.97■■■□□ 2.23
NDUFS3-210ENST00000533105 THUMPD2Q9BTF0 503 aaKnown RBP28.97■■■□□ 2.23
NDUFS3-210ENST00000533105 USP16Q9Y5T5 823 aa28.97■■■□□ 2.23
NDUFS3-210ENST00000533105 A0A087WZG4 1122 aa28.96■■■□□ 2.23
NDUFS3-210ENST00000533105 PRAMEF22A3QJZ6 481 aa28.96■■■□□ 2.23
NDUFS3-210ENST00000533105 C10orf71Q711Q0 1435 aa28.95■■■□□ 2.23
NDUFS3-210ENST00000533105 SNRPA1P09661 255 aaKnown RBP28.95■■■□□ 2.22
NDUFS3-210ENST00000533105 TGFB2P61812 414 aa28.95■■■□□ 2.22
NDUFS3-210ENST00000533105 WDR43Q15061 677 aaKnown RBP eCLIP28.95■■■□□ 2.22
NDUFS3-210ENST00000533105 A0A0G2JLW4 131 aa28.94■■■□□ 2.22
NDUFS3-210ENST00000533105 TM4SF1P30408 202 aa28.94■■■□□ 2.22
NDUFS3-210ENST00000533105 NPM2Q86SE8 214 aaKnown RBP28.94■■■□□ 2.22
NDUFS3-210ENST00000533105 DLG5Q8TDM6 1919 aa28.94■■■□□ 2.22
NDUFS3-210ENST00000533105 POLRMTO00411 1230 aaKnown RBP28.93■■■□□ 2.22
NDUFS3-210ENST00000533105 IL6STP40189 918 aaPredicted RBP28.93■■■□□ 2.22
NDUFS3-210ENST00000533105 RIPK4P57078 832 aa28.93■■■□□ 2.22
NDUFS3-210ENST00000533105 CCDC146Q8IYE0 955 aa28.93■■■□□ 2.22
NDUFS3-210ENST00000533105 PNISRQ8TF01 805 aaKnown RBP28.93■■■□□ 2.22
NDUFS3-210ENST00000533105 BCL2L12Q9HB09 334 aa28.93■■■□□ 2.22
NDUFS3-210ENST00000533105 PXDNLA1KZ92 1463 aa28.92■■■□□ 2.22
NDUFS3-210ENST00000533105 NFIXQ14938 502 aa28.92■■■□□ 2.22
NDUFS3-210ENST00000533105 TBC1D2BQ9UPU7 963 aa28.92■■■□□ 2.22
NDUFS3-210ENST00000533105 CHD4Q14839 1912 aa28.92■■■□□ 2.22
NDUFS3-210ENST00000533105 PIP4K2AP48426 406 aaPredicted RBP28.91■■■□□ 2.22
NDUFS3-210ENST00000533105 DPEP1P16444 411 aa28.9■■■□□ 2.22
NDUFS3-210ENST00000533105 TMPOP42166 694 aaKnown RBP28.89■■■□□ 2.22
NDUFS3-210ENST00000533105 BICDL1Q6ZP65 573 aa28.89■■■□□ 2.22
NDUFS3-210ENST00000533105 RRP7AQ9Y3A4 280 aaKnown RBP28.89■■■□□ 2.22
NDUFS3-210ENST00000533105 KIF13BQ9NQT8 1826 aa28.89■■■□□ 2.22
NDUFS3-210ENST00000533105 ZNF784Q8NCA9 323 aaPredicted RBP28.88■■■□□ 2.21
NDUFS3-210ENST00000533105 NEUROD2Q15784 382 aa28.87■■■□□ 2.21
NDUFS3-210ENST00000533105 ADAMTS8Q9UP79 889 aa28.87■■■□□ 2.21
NDUFS3-210ENST00000533105 N4BP2Q86UW6 1770 aaPredicted RBP28.86■■■□□ 2.21
NDUFS3-210ENST00000533105 BCS1LQ9Y276 419 aa28.86■■■□□ 2.21
NDUFS3-210ENST00000533105 ZNF316A6NFI3 1004 aaPredicted RBP28.85■■■□□ 2.21
NDUFS3-210ENST00000533105 SERPINB2P05120 415 aa28.85■■■□□ 2.21
NDUFS3-210ENST00000533105 LMOD3Q0VAK6 560 aa28.85■■■□□ 2.21
NDUFS3-210ENST00000533105 RUNDC1Q96C34 613 aa28.85■■■□□ 2.21
NDUFS3-210ENST00000533105 TBC1D9BQ66K14 1250 aa28.84■■■□□ 2.21
NDUFS3-210ENST00000533105 DZIP3Q86Y13 1208 aaKnown RBP28.84■■■□□ 2.21
NDUFS3-210ENST00000533105 KIAA1551Q9HCM1 1747 aa28.83■■■□□ 2.21
NDUFS3-210ENST00000533105 EIF4A1P60842 406 aaKnown RBP28.83■■■□□ 2.21
NDUFS3-210ENST00000533105 TSPYL4Q9UJ04 414 aa28.83■■■□□ 2.21
NDUFS3-210ENST00000533105 CAMTA2O94983 1202 aa28.82■■■□□ 2.2
NDUFS3-210ENST00000533105 NBPF26B4DH59 902 aa28.81■■■□□ 2.2
NDUFS3-210ENST00000533105 GIGYF1O75420 1035 aaPredicted RBP28.81■■■□□ 2.2
NDUFS3-210ENST00000533105 KCNA3P22001 575 aa28.81■■■□□ 2.2
NDUFS3-210ENST00000533105 CHRNA5P30532 468 aa28.81■■■□□ 2.2
NDUFS3-210ENST00000533105 NBPF10Q6P3W6 841 aaKnown RBP28.81■■■□□ 2.2
NDUFS3-210ENST00000533105 NBPF15Q8N660 670 aa28.81■■■□□ 2.2
NDUFS3-210ENST00000533105 KDM3BQ7LBC6 1761 aa28.8■■■□□ 2.2
NDUFS3-210ENST00000533105 PIM2Q9P1W9 311 aa28.8■■■□□ 2.2
NDUFS3-210ENST00000533105 SCN7AQ01118 1682 aa28.78■■■□□ 2.2
NDUFS3-210ENST00000533105 SETDB2Q96T68 719 aa28.77■■■□□ 2.2
NDUFS3-210ENST00000533105 AFDNP55196 1824 aaKnown RBP28.76■■■□□ 2.19
NDUFS3-210ENST00000533105 NGEFQ8N5V2 710 aa28.76■■■□□ 2.19
NDUFS3-210ENST00000533105 DALRD3Q5D0E6 543 aaKnown RBP28.75■■■□□ 2.19
NDUFS3-210ENST00000533105 CARMIL3Q8ND23 1372 aa28.75■■■□□ 2.19
NDUFS3-210ENST00000533105 ARHGAP27Q6ZUM4 889 aa28.74■■■□□ 2.19
NDUFS3-210ENST00000533105 TRIM35Q9UPQ4 493 aa28.74■■■□□ 2.19
NDUFS3-210ENST00000533105 ZNF652Q9Y2D9 606 aa28.74■■■□□ 2.19
NDUFS3-210ENST00000533105 LAS1LQ9Y4W2 734 aaKnown RBP28.74■■■□□ 2.19
NDUFS3-210ENST00000533105 NRXN2Q9P2S2 1712 aa28.74■■■□□ 2.19
NDUFS3-210ENST00000533105 NPHP1O15259 732 aa28.73■■■□□ 2.19
NDUFS3-210ENST00000533105 CCDC24Q8N4L8 307 aa28.73■■■□□ 2.19
NDUFS3-210ENST00000533105 BABAM1Q9NWV8 329 aa28.73■■■□□ 2.19
NDUFS3-210ENST00000533105 LAMB4A4D0S4 1761 aa28.73■■■□□ 2.19
NDUFS3-210ENST00000533105 MYL6BP14649 208 aa28.72■■■□□ 2.19
NDUFS3-210ENST00000533105 CLEC4GQ6UXB4 293 aa28.72■■■□□ 2.19
NDUFS3-210ENST00000533105 PRR5LQ6MZQ0 368 aa28.71■■■□□ 2.19
NDUFS3-210ENST00000533105 C2CD5Q86YS7 1000 aa28.71■■■□□ 2.19
NDUFS3-210ENST00000533105 BCORQ6W2J9 1755 aa28.7■■■□□ 2.18
NDUFS3-210ENST00000533105 H0YIN7 160 aa28.69■■■□□ 2.18
NDUFS3-210ENST00000533105 EIF2S2P20042 333 aaKnown RBP28.69■■■□□ 2.18
NDUFS3-210ENST00000533105 CCDC184Q52MB2 194 aa28.69■■■□□ 2.18
NDUFS3-210ENST00000533105 CNBD1Q8NA66 436 aa28.69■■■□□ 2.18
NDUFS3-210ENST00000533105 BRCA1P38398 1863 aaKnown RBP28.69■■■□□ 2.18
NDUFS3-210ENST00000533105 APAF1O14727 1248 aa28.68■■■□□ 2.18
NDUFS3-210ENST00000533105 ANP32CO43423 234 aa28.67■■■□□ 2.18
NDUFS3-210ENST00000533105 HLFQ16534 295 aa28.67■■■□□ 2.18
NDUFS3-210ENST00000533105 BRIP1Q9BX63 1249 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms