RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 TSNARE1Q96NA8 513 aa16.95■□□□□ 0.3
LRRK1-207ENST00000531270 RAB34Q9BZG1 259 aa16.95■□□□□ 0.3
LRRK1-207ENST00000531270 TMOD3Q9NYL9 352 aa16.95■□□□□ 0.3
LRRK1-207ENST00000531270 CCDC40Q4G0X9 1142 aa16.95■□□□□ 0.3
LRRK1-207ENST00000531270 EHMT1Q9H9B1 1298 aa16.95■□□□□ 0.3
LRRK1-207ENST00000531270 SYCP3Q8IZU3 236 aa16.95■□□□□ 0.3
LRRK1-207ENST00000531270 NOP2P46087 812 aaKnown RBP16.95■□□□□ 0.3
LRRK1-207ENST00000531270 RBM25P49756 843 aaKnown RBP16.95■□□□□ 0.3
LRRK1-207ENST00000531270 SSRP1Q08945 709 aaKnown RBP16.95■□□□□ 0.3
LRRK1-207ENST00000531270 FGFR1OPO95684 399 aaKnown RBP16.94■□□□□ 0.3
LRRK1-207ENST00000531270 CCDC175P0C221 793 aa16.94■□□□□ 0.3
LRRK1-207ENST00000531270 LARP6Q9BRS8 491 aaKnown RBP16.94■□□□□ 0.3
LRRK1-207ENST00000531270 ANKRD18BA2A2Z9 1011 aa16.94■□□□□ 0.3
LRRK1-207ENST00000531270 PPP1R14CQ8TAE6 165 aa16.94■□□□□ 0.3
LRRK1-207ENST00000531270 ANO10Q9NW15 660 aa16.94■□□□□ 0.3
LRRK1-207ENST00000531270 IDEP14735 1019 aa16.94■□□□□ 0.3
LRRK1-207ENST00000531270 MAATS1Q7Z4T9 603 aa16.94■□□□□ 0.3
LRRK1-207ENST00000531270 BICD1Q96G01 975 aa16.94■□□□□ 0.3
LRRK1-207ENST00000531270 BAG4O95429 457 aaKnown RBP16.93■□□□□ 0.3
LRRK1-207ENST00000531270 YEATS4O95619 227 aa16.93■□□□□ 0.3
LRRK1-207ENST00000531270 CNNM3Q8NE01 707 aa16.93■□□□□ 0.3
LRRK1-207ENST00000531270 FSD2A1L4K1 749 aa16.93■□□□□ 0.3
LRRK1-207ENST00000531270 CCT2P78371 535 aaKnown RBP16.93■□□□□ 0.3
LRRK1-207ENST00000531270 ZNF692Q9BU19 519 aaPredicted RBP16.93■□□□□ 0.3
LRRK1-207ENST00000531270 PANK2Q9BZ23 570 aa16.93■□□□□ 0.3
LRRK1-207ENST00000531270 CLIP2Q9UDT6 1046 aa16.93■□□□□ 0.3
LRRK1-207ENST00000531270 GOLGA8AA7E2F4 631 aa16.93■□□□□ 0.3
LRRK1-207ENST00000531270 GOLGA8BA8MQT2 603 aa16.93■□□□□ 0.3
LRRK1-207ENST00000531270 RAD54L2Q9Y4B4 1467 aa16.93■□□□□ 0.3
LRRK1-207ENST00000531270 ECM2O94769 699 aaPredicted RBP16.93■□□□□ 0.3
LRRK1-207ENST00000531270 ADAMTS2O95450 1211 aa16.93■□□□□ 0.3
LRRK1-207ENST00000531270 APBB1IPQ7Z5R6 666 aaPredicted RBP16.93■□□□□ 0.3
LRRK1-207ENST00000531270 THEMISQ8N1K5 641 aaPredicted RBP16.93■□□□□ 0.3
LRRK1-207ENST00000531270 TAOK3Q9H2K8 898 aa16.93■□□□□ 0.3
LRRK1-207ENST00000531270 BIN1O00499 593 aa16.93■□□□□ 0.3
LRRK1-207ENST00000531270 IQCA1Q86XH1 822 aa16.93■□□□□ 0.3
LRRK1-207ENST00000531270 AFAP1Q8N556 730 aa16.93■□□□□ 0.3
LRRK1-207ENST00000531270 CCDC8Q9H0W5 538 aaPredicted RBP16.93■□□□□ 0.3
LRRK1-207ENST00000531270 C6orf229H3BNL8 230 aa16.92■□□□□ 0.3
LRRK1-207ENST00000531270 MAP3K12Q12852 859 aa16.92■□□□□ 0.3
LRRK1-207ENST00000531270 CKAP2LQ8IYA6 745 aa16.92■□□□□ 0.3
LRRK1-207ENST00000531270 VTI1AQ96AJ9 217 aa16.92■□□□□ 0.3
LRRK1-207ENST00000531270 ISM2Q6H9L7 571 aa16.92■□□□□ 0.3
LRRK1-207ENST00000531270 MPRIPQ6WCQ1 1025 aa16.92■□□□□ 0.3
LRRK1-207ENST00000531270 ZFP91Q96JP5 570 aaPredicted RBP16.92■□□□□ 0.3
LRRK1-207ENST00000531270 GNAT3A8MTJ3 354 aa16.92■□□□□ 0.3
LRRK1-207ENST00000531270 IFIT3O14879 490 aaKnown RBP16.92■□□□□ 0.3
LRRK1-207ENST00000531270 MYO1BO43795 1136 aa16.92■□□□□ 0.3
LRRK1-207ENST00000531270 ATP2C2O75185 946 aa16.92■□□□□ 0.3
LRRK1-207ENST00000531270 CETN1Q12798 172 aa16.92■□□□□ 0.3
LRRK1-207ENST00000531270 FAM107BQ9H098 131 aa16.92■□□□□ 0.3
LRRK1-207ENST00000531270 CCDC196A0A1B0GTZ2 297 aa16.91■□□□□ 0.3
LRRK1-207ENST00000531270 PPFIA3O75145 1194 aa16.91■□□□□ 0.3
LRRK1-207ENST00000531270 MYOM3Q5VTT5 1437 aa16.91■□□□□ 0.3
LRRK1-207ENST00000531270 ZNF213O14771 459 aa16.91■□□□□ 0.3
LRRK1-207ENST00000531270 USHBP1Q8N6Y0 703 aa16.91■□□□□ 0.3
LRRK1-207ENST00000531270 RGS22Q8NE09 1264 aa16.91■□□□□ 0.3
LRRK1-207ENST00000531270 TRMT112Q9UI30 125 aaKnown RBP16.91■□□□□ 0.3
LRRK1-207ENST00000531270 PHAXQ9H814 394 aaKnown RBP16.91■□□□□ 0.3
LRRK1-207ENST00000531270 SLC5A1P13866 664 aa16.91■□□□□ 0.3
LRRK1-207ENST00000531270 MCM10Q7L590 875 aa16.91■□□□□ 0.3
LRRK1-207ENST00000531270 RAB11FIP4Q86YS3 637 aa16.91■□□□□ 0.3
LRRK1-207ENST00000531270 OTUD6BQ8N6M0 293 aa16.91■□□□□ 0.3
LRRK1-207ENST00000531270 IPO4Q8TEX9 1081 aaKnown RBP16.91■□□□□ 0.3
LRRK1-207ENST00000531270 RTEL1-TNFRSF6BF6WH68 1400 aa16.9■□□□□ 0.3
LRRK1-207ENST00000531270 SPATA24Q86W54 205 aa16.9■□□□□ 0.3
LRRK1-207ENST00000531270 KIF18AQ8NI77 898 aa16.9■□□□□ 0.3
LRRK1-207ENST00000531270 FYCO1Q9BQS8 1478 aa16.9■□□□□ 0.3
LRRK1-207ENST00000531270 NBPF1Q3BBV0 1214 aa16.9■□□□□ 0.3
LRRK1-207ENST00000531270 GIGYF2Q6Y7W6 1299 aaKnown RBP16.9■□□□□ 0.3
LRRK1-207ENST00000531270 ALS2CR12Q96Q35 445 aa16.9■□□□□ 0.3
LRRK1-207ENST00000531270 TERF1P54274 439 aa16.9■□□□□ 0.3
LRRK1-207ENST00000531270 IFIT5Q13325 482 aaKnown RBP16.9■□□□□ 0.3
LRRK1-207ENST00000531270 MCM3P25205 808 aa16.9■□□□□ 0.3
LRRK1-207ENST00000531270 CALML4Q96GE6 196 aa16.9■□□□□ 0.3
LRRK1-207ENST00000531270 SYNCQ9H7C4 482 aa16.9■□□□□ 0.3
LRRK1-207ENST00000531270 KIF20AO95235 890 aa16.89■□□□□ 0.29
LRRK1-207ENST00000531270 MX1P20591 662 aa16.89■□□□□ 0.29
LRRK1-207ENST00000531270 CATIPQ7Z7H3 387 aa16.89■□□□□ 0.29
LRRK1-207ENST00000531270 PODXL2Q9NZ53 605 aa16.89■□□□□ 0.29
LRRK1-207ENST00000531270 IKBKGQ9Y6K9 419 aa16.89■□□□□ 0.29
LRRK1-207ENST00000531270 SMARCA2P51531 1590 aa16.89■□□□□ 0.29
LRRK1-207ENST00000531270 MAP3K9P80192 1104 aa16.89■□□□□ 0.29
LRRK1-207ENST00000531270 CTR9Q6PD62 1173 aa16.89■□□□□ 0.29
LRRK1-207ENST00000531270 TMEM57Q8N5G2 664 aa16.89■□□□□ 0.29
LRRK1-207ENST00000531270 STAC3Q96MF2 364 aa16.89■□□□□ 0.29
LRRK1-207ENST00000531270 MCM4P33991 863 aa16.89■□□□□ 0.29
LRRK1-207ENST00000531270 PAIP2Q9BPZ3 127 aaKnown RBP16.89■□□□□ 0.29
LRRK1-207ENST00000531270 THUMPD2Q9BTF0 503 aaKnown RBP16.89■□□□□ 0.29
LRRK1-207ENST00000531270 GPTP24298 496 aa16.89■□□□□ 0.29
LRRK1-207ENST00000531270 MICALCLQ6ZW33 695 aa16.89■□□□□ 0.29
LRRK1-207ENST00000531270 KIF1BPQ96EK5 621 aa16.89■□□□□ 0.29
LRRK1-207ENST00000531270 ESPNB1AK53 854 aa16.88■□□□□ 0.29
LRRK1-207ENST00000531270 FERMT1Q9BQL6 677 aa16.88■□□□□ 0.29
LRRK1-207ENST00000531270 ACTN2P35609 894 aa16.88■□□□□ 0.29
LRRK1-207ENST00000531270 SRRTQ9BXP5 876 aaKnown RBP16.88■□□□□ 0.29
LRRK1-207ENST00000531270 TMC6Q7Z403 805 aa16.88■□□□□ 0.29
LRRK1-207ENST00000531270 RAB3IL1Q8TBN0 382 aa16.88■□□□□ 0.29
LRRK1-207ENST00000531270 PRDM2Q13029 1718 aa16.88■□□□□ 0.29
LRRK1-207ENST00000531270 A0A087WZG4 1122 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms