RNA–Protein interactions for RNA: ENST00000530624.5

CTSB-218, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-218ENST00000530624 KLHL34Q8N239 644 aa19.04■□□□□ 0.64
CTSB-218ENST00000530624 GOLGB1Q14789 3259 aaKnown RBP19.04■□□□□ 0.64
CTSB-218ENST00000530624 COL15A1P39059 1388 aa19.04■□□□□ 0.64
CTSB-218ENST00000530624 KCNQ3O43525 872 aa19.03■□□□□ 0.64
CTSB-218ENST00000530624 PNISRQ8TF01 805 aaKnown RBP19.03■□□□□ 0.64
CTSB-218ENST00000530624 KIF13BQ9NQT8 1826 aa19.02■□□□□ 0.64
CTSB-218ENST00000530624 EIF5P55010 431 aaKnown RBP19.02■□□□□ 0.64
CTSB-218ENST00000530624 NARFQ9UHQ1 456 aa19.02■□□□□ 0.64
CTSB-218ENST00000530624 SRP68Q9UHB9 627 aaKnown RBP19.01■□□□□ 0.63
CTSB-218ENST00000530624 KDM3BQ7LBC6 1761 aa19.01■□□□□ 0.63
CTSB-218ENST00000530624 ZPR1O75312 459 aa19■□□□□ 0.63
CTSB-218ENST00000530624 SNRPA1P09661 255 aaKnown RBP19■□□□□ 0.63
CTSB-218ENST00000530624 IL6STP40189 918 aaPredicted RBP19■□□□□ 0.63
CTSB-218ENST00000530624 TMPOP42166 694 aaKnown RBP19■□□□□ 0.63
CTSB-218ENST00000530624 FKBP8Q14318 412 aa19■□□□□ 0.63
CTSB-218ENST00000530624 WDR43Q15061 677 aaKnown RBP eCLIP19■□□□□ 0.63
CTSB-218ENST00000530624 C10orf71Q711Q0 1435 aa19■□□□□ 0.63
CTSB-218ENST00000530624 A0A087WZG4 1122 aa18.99■□□□□ 0.63
CTSB-218ENST00000530624 TM4SF1P30408 202 aa18.99■□□□□ 0.63
CTSB-218ENST00000530624 LMOD3Q0VAK6 560 aa18.99■□□□□ 0.63
CTSB-218ENST00000530624 RUNDC1Q96C34 613 aa18.99■□□□□ 0.63
CTSB-218ENST00000530624 ADAMTS8Q9UP79 889 aa18.99■□□□□ 0.63
CTSB-218ENST00000530624 PARP3Q9Y6F1 533 aa18.99■□□□□ 0.63
CTSB-218ENST00000530624 CANXP27824 592 aaKnown RBP18.98■□□□□ 0.63
CTSB-218ENST00000530624 RIPK4P57078 832 aa18.98■□□□□ 0.63
CTSB-218ENST00000530624 GPR162Q16538 588 aa18.98■□□□□ 0.63
CTSB-218ENST00000530624 USPL1Q5W0Q7 1092 aa18.98■□□□□ 0.63
CTSB-218ENST00000530624 BABAM1Q9NWV8 329 aa18.98■□□□□ 0.63
CTSB-218ENST00000530624 TGFB2P61812 414 aa18.97■□□□□ 0.63
CTSB-218ENST00000530624 USP16Q9Y5T5 823 aa18.97■□□□□ 0.63
CTSB-218ENST00000530624 DDR1Q08345 913 aa18.96■□□□□ 0.63
CTSB-218ENST00000530624 THUMPD2Q9BTF0 503 aaKnown RBP18.96■□□□□ 0.63
CTSB-218ENST00000530624 KIAA1551Q9HCM1 1747 aa18.96■□□□□ 0.63
CTSB-218ENST00000530624 SCN7AQ01118 1682 aa18.95■□□□□ 0.62
CTSB-218ENST00000530624 POLRMTO00411 1230 aaKnown RBP18.95■□□□□ 0.62
CTSB-218ENST00000530624 GRIN3BO60391 1043 aa18.95■□□□□ 0.62
CTSB-218ENST00000530624 A1BGP04217 495 aa18.95■□□□□ 0.62
CTSB-218ENST00000530624 YY1P25490 414 aa18.95■□□□□ 0.62
CTSB-218ENST00000530624 BCL2L12Q9HB09 334 aa18.95■□□□□ 0.62
CTSB-218ENST00000530624 LAMB4A4D0S4 1761 aa18.95■□□□□ 0.62
CTSB-218ENST00000530624 PXDNLA1KZ92 1463 aa18.95■□□□□ 0.62
CTSB-218ENST00000530624 PRAMEF22A3QJZ6 481 aa18.94■□□□□ 0.62
CTSB-218ENST00000530624 YBX3P16989 372 aaKnown RBP eCLIP18.94■□□□□ 0.621e-9■■□□□ 13.9
CTSB-218ENST00000530624 EIF4A1P60842 406 aaKnown RBP18.94■□□□□ 0.62
CTSB-218ENST00000530624 MIS18AQ9NYP9 233 aa18.94■□□□□ 0.62
CTSB-218ENST00000530624 CCDC146Q8IYE0 955 aa18.93■□□□□ 0.62
CTSB-218ENST00000530624 NRXN2Q9P2S2 1712 aa18.93■□□□□ 0.62
CTSB-218ENST00000530624 CHD4Q14839 1912 aa18.92■□□□□ 0.62
CTSB-218ENST00000530624 RGL2O15211 777 aa18.92■□□□□ 0.62
CTSB-218ENST00000530624 GIGYF1O75420 1035 aaPredicted RBP18.92■□□□□ 0.62
CTSB-218ENST00000530624 NFIXQ14938 502 aa18.92■□□□□ 0.62
CTSB-218ENST00000530624 NPM2Q86SE8 214 aaKnown RBP18.91■□□□□ 0.62
CTSB-218ENST00000530624 TRIM35Q9UPQ4 493 aa18.91■□□□□ 0.62
CTSB-218ENST00000530624 BCORQ6W2J9 1755 aa18.91■□□□□ 0.62
CTSB-218ENST00000530624 NBPF26B4DH59 902 aa18.9■□□□□ 0.62
CTSB-218ENST00000530624 CAMTA2O94983 1202 aa18.9■□□□□ 0.62
CTSB-218ENST00000530624 NBPF10Q6P3W6 841 aaKnown RBP18.9■□□□□ 0.62
CTSB-218ENST00000530624 PELP1Q8IZL8 1130 aaKnown RBP18.9■□□□□ 0.62
CTSB-218ENST00000530624 NBPF15Q8N660 670 aa18.9■□□□□ 0.62
CTSB-218ENST00000530624 TSPYL4Q9UJ04 414 aa18.9■□□□□ 0.62
CTSB-218ENST00000530624 TBC1D2BQ9UPU7 963 aa18.89■□□□□ 0.61
CTSB-218ENST00000530624 RRP7AQ9Y3A4 280 aaKnown RBP18.89■□□□□ 0.61
CTSB-218ENST00000530624 ANP32CO43423 234 aa18.88■□□□□ 0.61
CTSB-218ENST00000530624 CLEC4GQ6UXB4 293 aa18.88■□□□□ 0.61
CTSB-218ENST00000530624 DZIP3Q86Y13 1208 aaKnown RBP18.88■□□□□ 0.61
CTSB-218ENST00000530624 AFDNP55196 1824 aaKnown RBP18.88■□□□□ 0.61
CTSB-218ENST00000530624 BRCA1P38398 1863 aaKnown RBP18.88■□□□□ 0.61
CTSB-218ENST00000530624 CHL1O00533 1208 aa18.87■□□□□ 0.61
CTSB-218ENST00000530624 SERPINB2P05120 415 aa18.87■□□□□ 0.61
CTSB-218ENST00000530624 KCNA3P22001 575 aa18.87■□□□□ 0.61
CTSB-218ENST00000530624 ERBB4Q15303 1308 aa18.87■□□□□ 0.61
CTSB-218ENST00000530624 NEUROD2Q15784 382 aa18.87■□□□□ 0.61
CTSB-218ENST00000530624 N4BP2Q86UW6 1770 aaPredicted RBP18.87■□□□□ 0.61
CTSB-218ENST00000530624 ZNF330Q9Y3S2 320 aaPredicted RBP18.87■□□□□ 0.61
CTSB-218ENST00000530624 CARMIL3Q8ND23 1372 aa18.86■□□□□ 0.61
CTSB-218ENST00000530624 A0A0G2JLW4 131 aa18.86■□□□□ 0.61
CTSB-218ENST00000530624 DPEP1P16444 411 aa18.86■□□□□ 0.61
CTSB-218ENST00000530624 TBC1D9BQ66K14 1250 aa18.86■□□□□ 0.61
CTSB-218ENST00000530624 PIP4K2AP48426 406 aaPredicted RBP18.85■□□□□ 0.61
CTSB-218ENST00000530624 CCDC184Q52MB2 194 aa18.85■□□□□ 0.61
CTSB-218ENST00000530624 ZNF652Q9Y2D9 606 aa18.84■□□□□ 0.61
CTSB-218ENST00000530624 APAF1O14727 1248 aa18.83■□□□□ 0.6
CTSB-218ENST00000530624 CFAP44Q96MT7 982 aa18.83■□□□□ 0.6
CTSB-218ENST00000530624 NCBP3Q53F19 620 aaKnown RBP18.82■□□□□ 0.6
CTSB-218ENST00000530624 BICDL1Q6ZP65 573 aa18.82■□□□□ 0.6
CTSB-218ENST00000530624 SETDB2Q96T68 719 aa18.82■□□□□ 0.6
CTSB-218ENST00000530624 PIM2Q9P1W9 311 aa18.82■□□□□ 0.6
CTSB-218ENST00000530624 PDZRN3Q9UPQ7 1066 aa18.82■□□□□ 0.6
CTSB-218ENST00000530624 ERVV-1B6SEH8 477 aa18.81■□□□□ 0.6
CTSB-218ENST00000530624 ZNF853P0CG23 659 aa18.81■□□□□ 0.6
CTSB-218ENST00000530624 CALD1Q05682 793 aaKnown RBP18.81■□□□□ 0.6
CTSB-218ENST00000530624 DLEC1Q9Y238 1755 aa18.81■□□□□ 0.6
CTSB-218ENST00000530624 ARFGEF1Q9Y6D6 1849 aa18.8■□□□□ 0.6
CTSB-218ENST00000530624 HOXB7P09629 217 aa18.8■□□□□ 0.6
CTSB-218ENST00000530624 PRR5LQ6MZQ0 368 aa18.8■□□□□ 0.6
CTSB-218ENST00000530624 LRP10Q7Z4F1 713 aa18.8■□□□□ 0.6
CTSB-218ENST00000530624 BRIP1Q9BX63 1249 aa18.8■□□□□ 0.6
CTSB-218ENST00000530624 MRS2Q9HD23 443 aa18.8■□□□□ 0.6
CTSB-218ENST00000530624 BCS1LQ9Y276 419 aa18.8■□□□□ 0.6
CTSB-218ENST00000530624 CHRNA5P30532 468 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms