RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 CAMKK2Q96RR4 588 aa8.32□□□□□ -1.08
ATPAF1-209ENST00000529214 RAD21O60216 631 aa8.31□□□□□ -1.08
ATPAF1-209ENST00000529214 MTHFSDQ2M296 383 aaKnown RBP8.31□□□□□ -1.08
ATPAF1-209ENST00000529214 ZNF530Q6P9A1 599 aaPredicted RBP8.31□□□□□ -1.08
ATPAF1-209ENST00000529214 CDAN1Q8IWY9 1227 aa8.31□□□□□ -1.08
ATPAF1-209ENST00000529214 CCDC82Q8N4S0 544 aa8.31□□□□□ -1.08
ATPAF1-209ENST00000529214 PHACTR3Q96KR7 559 aa8.31□□□□□ -1.08
ATPAF1-209ENST00000529214 AK7Q96M32 723 aa8.31□□□□□ -1.08
ATPAF1-209ENST00000529214 KDM4CQ9H3R0 1056 aa8.31□□□□□ -1.08
ATPAF1-209ENST00000529214 IGSF3O75054 1194 aa8.3□□□□□ -1.08
ATPAF1-209ENST00000529214 HSP90AB1P08238 724 aaKnown RBP8.3□□□□□ -1.08
ATPAF1-209ENST00000529214 HSP90B1P14625 803 aaKnown RBP8.3□□□□□ -1.08
ATPAF1-209ENST00000529214 PRKAR2BP31323 418 aa8.3□□□□□ -1.08
ATPAF1-209ENST00000529214 EZH2Q15910 746 aaKnown RBP8.3□□□□□ -1.08
ATPAF1-209ENST00000529214 AKAP4Q5JQC9 854 aa8.3□□□□□ -1.08
ATPAF1-209ENST00000529214 C1orf141Q5JVX7 400 aa8.3□□□□□ -1.08
ATPAF1-209ENST00000529214 SYTL4Q96C24 671 aaPredicted RBP8.3□□□□□ -1.08
ATPAF1-209ENST00000529214 DCAF5Q96JK2 942 aa8.3□□□□□ -1.08
ATPAF1-209ENST00000529214 ERVV-2B6SEH9 535 aa8.29□□□□□ -1.08
ATPAF1-209ENST00000529214 GAS2L2Q8NHY3 880 aa8.29□□□□□ -1.08
ATPAF1-209ENST00000529214 PLEKHF1Q96S99 279 aa8.29□□□□□ -1.08
ATPAF1-209ENST00000529214 SGIP1Q9BQI5 828 aa8.29□□□□□ -1.08
ATPAF1-209ENST00000529214 PNNQ9H307 717 aaKnown RBP8.29□□□□□ -1.08
ATPAF1-209ENST00000529214 SHANK3Q9BYB0 1731 aa8.29□□□□□ -1.08
ATPAF1-209ENST00000529214 CCDC184Q52MB2 194 aa8.28□□□□□ -1.08
ATPAF1-209ENST00000529214 MPRIPQ6WCQ1 1025 aa8.28□□□□□ -1.08
ATPAF1-209ENST00000529214 PIGBQ92521 554 aa8.28□□□□□ -1.08
ATPAF1-209ENST00000529214 LGR6Q9HBX8 967 aa8.28□□□□□ -1.08
ATPAF1-209ENST00000529214 ADAMTS8Q9UP79 889 aa8.28□□□□□ -1.08
ATPAF1-209ENST00000529214 PKD1L3Q7Z443 1732 aa8.28□□□□□ -1.08
ATPAF1-209ENST00000529214 SBF2Q86WG5 1849 aa8.28□□□□□ -1.08
ATPAF1-209ENST00000529214 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.27□□□□□ -1.09
ATPAF1-209ENST00000529214 GNAT3A8MTJ3 354 aa8.27□□□□□ -1.09
ATPAF1-209ENST00000529214 FLIIQ13045 1269 aa8.27□□□□□ -1.09
ATPAF1-209ENST00000529214 ZFP91Q96JP5 570 aaPredicted RBP8.27□□□□□ -1.09
ATPAF1-209ENST00000529214 RNMTO43148 476 aaKnown RBP8.26□□□□□ -1.09
ATPAF1-209ENST00000529214 NEFMP07197 916 aa8.26□□□□□ -1.09
ATPAF1-209ENST00000529214 HMGB1P09429 215 aaKnown RBP8.26□□□□□ -1.09
ATPAF1-209ENST00000529214 CABP4P57796 275 aa8.26□□□□□ -1.09
ATPAF1-209ENST00000529214 WDR43Q15061 677 aaKnown RBP eCLIP8.26□□□□□ -1.09
ATPAF1-209ENST00000529214 TXNRD1Q16881 649 aa8.26□□□□□ -1.09
ATPAF1-209ENST00000529214 SMYD5Q6GMV2 418 aa8.26□□□□□ -1.09
ATPAF1-209ENST00000529214 NFATC2IPQ8NCF5 419 aa8.26□□□□□ -1.09
ATPAF1-209ENST00000529214 IL17REQ8NFR9 667 aa8.26□□□□□ -1.09
ATPAF1-209ENST00000529214 TRAIPQ9BWF2 469 aa8.26□□□□□ -1.09
ATPAF1-209ENST00000529214 TMOD3Q9NYL9 352 aa8.26□□□□□ -1.09
ATPAF1-209ENST00000529214 HTATSF1O43719 755 aaKnown RBP8.26□□□□□ -1.09
ATPAF1-209ENST00000529214 PNISRQ8TF01 805 aaKnown RBP8.26□□□□□ -1.09
ATPAF1-209ENST00000529214 ATG3Q9NT62 314 aa8.26□□□□□ -1.09
ATPAF1-209ENST00000529214 TNS1Q9HBL0 1735 aaKnown RBP8.25□□□□□ -1.09
ATPAF1-209ENST00000529214 KDM6AO15550 1401 aaPredicted RBP8.25□□□□□ -1.09
ATPAF1-209ENST00000529214 KAT6BQ8WYB5 2073 aa8.25□□□□□ -1.09
ATPAF1-209ENST00000529214 SLC27A3Q5K4L6 730 aa8.25□□□□□ -1.09
ATPAF1-209ENST00000529214 RGS22Q8NE09 1264 aa8.25□□□□□ -1.09
ATPAF1-209ENST00000529214 SMARCC1Q92922 1105 aaPredicted RBP8.25□□□□□ -1.09
ATPAF1-209ENST00000529214 SLC52A2Q9HAB3 445 aa8.25□□□□□ -1.09
ATPAF1-209ENST00000529214 MRS2Q9HD23 443 aa8.25□□□□□ -1.09
ATPAF1-209ENST00000529214 LRRC4BQ9NT99 713 aa8.25□□□□□ -1.09
ATPAF1-209ENST00000529214 ASAP1Q9ULH1 1129 aa8.25□□□□□ -1.09
ATPAF1-209ENST00000529214 NHSQ6T4R5 1651 aa8.24□□□□□ -1.09
ATPAF1-209ENST00000529214 MNX1P50219 401 aaPredicted RBP8.24□□□□□ -1.09
ATPAF1-209ENST00000529214 ATN1P54259 1190 aaPredicted RBP8.24□□□□□ -1.09
ATPAF1-209ENST00000529214 NFE2L2Q16236 605 aa8.24□□□□□ -1.09
ATPAF1-209ENST00000529214 E2F4Q16254 413 aa8.24□□□□□ -1.09
ATPAF1-209ENST00000529214 DCAF8Q5TAQ9 597 aa8.24□□□□□ -1.09
ATPAF1-209ENST00000529214 RTF1Q92541 710 aaKnown RBP8.24□□□□□ -1.09
ATPAF1-209ENST00000529214 RUNDC1Q96C34 613 aa8.24□□□□□ -1.09
ATPAF1-209ENST00000529214 MAPK8IP3Q9UPT6 1336 aa8.23□□□□□ -1.09
ATPAF1-209ENST00000529214 MAP3K5Q99683 1374 aa8.23□□□□□ -1.09
ATPAF1-209ENST00000529214 TMPOP42166 694 aaKnown RBP8.23□□□□□ -1.09
ATPAF1-209ENST00000529214 NBPF14Q5TI25 921 aa8.23□□□□□ -1.09
ATPAF1-209ENST00000529214 DIEXFQ68CQ4 756 aaKnown RBP8.23□□□□□ -1.09
ATPAF1-209ENST00000529214 CCDC146Q8IYE0 955 aa8.23□□□□□ -1.09
ATPAF1-209ENST00000529214 CEMIPQ8WUJ3 1361 aa8.22□□□□□ -1.09
ATPAF1-209ENST00000529214 DOT1LQ8TEK3 1739 aa8.22□□□□□ -1.09
ATPAF1-209ENST00000529214 LOC102724428A0A0B4J2F2 783 aa8.22□□□□□ -1.09
ATPAF1-209ENST00000529214 HMGB2P26583 209 aaKnown RBP8.22□□□□□ -1.09
ATPAF1-209ENST00000529214 NUBP1P53384 320 aa8.22□□□□□ -1.09
ATPAF1-209ENST00000529214 KCNQ4P56696 695 aa8.22□□□□□ -1.09
ATPAF1-209ENST00000529214 SIK1P57059 783 aa8.22□□□□□ -1.09
ATPAF1-209ENST00000529214 RIPK4P57078 832 aa8.22□□□□□ -1.09
ATPAF1-209ENST00000529214 TEFQ10587 303 aa8.22□□□□□ -1.09
ATPAF1-209ENST00000529214 DCTN1Q14203 1278 aa8.22□□□□□ -1.09
ATPAF1-209ENST00000529214 MCM10Q7L590 875 aa8.22□□□□□ -1.09
ATPAF1-209ENST00000529214 CCNL1Q9UK58 526 aaPredicted RBP8.22□□□□□ -1.09
ATPAF1-209ENST00000529214 BTAF1O14981 1849 aa8.22□□□□□ -1.09
ATPAF1-209ENST00000529214 TOGARAM1Q9Y4F4 1720 aa8.22□□□□□ -1.09
ATPAF1-209ENST00000529214 PALLDQ8WX93 1383 aa8.22□□□□□ -1.09
ATPAF1-209ENST00000529214 SLC39A6Q13433 755 aa8.21□□□□□ -1.09
ATPAF1-209ENST00000529214 SLC15A2Q16348 729 aa8.21□□□□□ -1.09
ATPAF1-209ENST00000529214 TMCO4Q5TGY1 634 aa8.21□□□□□ -1.09
ATPAF1-209ENST00000529214 ERICH6BQ5W0A0 696 aa8.21□□□□□ -1.09
ATPAF1-209ENST00000529214 SLC4A9Q96Q91 983 aa8.21□□□□□ -1.09
ATPAF1-209ENST00000529214 MTMR7Q9Y216 660 aa8.21□□□□□ -1.09
ATPAF1-209ENST00000529214 ITGB4P16144 1822 aa8.21□□□□□ -1.1
ATPAF1-209ENST00000529214 APAF1O14727 1248 aa8.2□□□□□ -1.1
ATPAF1-209ENST00000529214 ATP6V1AP38606 617 aa8.2□□□□□ -1.1
ATPAF1-209ENST00000529214 R3HDM1Q15032 1099 aaKnown RBP8.2□□□□□ -1.1
ATPAF1-209ENST00000529214 TAF7Q15545 349 aaPredicted RBP8.2□□□□□ -1.1
ATPAF1-209ENST00000529214 RGPD3A6NKT7 1758 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms