RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 PPP4CP60510 307 aa4.77□□□□□ -1.65
PTPN22-207ENST00000528414 ZNF513Q8N8E2 541 aaPredicted RBP4.77□□□□□ -1.65
PTPN22-207ENST00000528414 ANP32BQ92688 251 aaKnown RBP4.77□□□□□ -1.65
PTPN22-207ENST00000528414 ZNF777Q9ULD5 760 aaPredicted RBP4.77□□□□□ -1.65
PTPN22-207ENST00000528414 FANCIQ9NVI1 1328 aa4.77□□□□□ -1.65
PTPN22-207ENST00000528414 N4BP2Q86UW6 1770 aaPredicted RBP4.77□□□□□ -1.65
PTPN22-207ENST00000528414 ZMYND10O75800 440 aa4.76□□□□□ -1.65
PTPN22-207ENST00000528414 BDNFP23560 247 aa4.76□□□□□ -1.65
PTPN22-207ENST00000528414 KCNV2Q8TDN2 545 aa4.76□□□□□ -1.65
PTPN22-207ENST00000528414 GJD4Q96KN9 370 aaPredicted RBP4.76□□□□□ -1.65
PTPN22-207ENST00000528414 ARHGEF10LQ9HCE6 1279 aa4.76□□□□□ -1.65
PTPN22-207ENST00000528414 RBM19Q9Y4C8 960 aaKnown RBP4.76□□□□□ -1.65
PTPN22-207ENST00000528414 SCN11AQ9UI33 1791 aa4.76□□□□□ -1.65
PTPN22-207ENST00000528414 GOLIM4O00461 696 aa4.76□□□□□ -1.65
PTPN22-207ENST00000528414 GYS2P54840 703 aa4.76□□□□□ -1.65
PTPN22-207ENST00000528414 SETDB1Q15047 1291 aa4.76□□□□□ -1.65
PTPN22-207ENST00000528414 HSP90AB3PQ58FF7 597 aa4.76□□□□□ -1.65
PTPN22-207ENST00000528414 MSL3Q8N5Y2 521 aaKnown RBP4.76□□□□□ -1.65
PTPN22-207ENST00000528414 DRC1Q96MC2 740 aa4.76□□□□□ -1.65
PTPN22-207ENST00000528414 NRBP1Q9UHY1 535 aa4.76□□□□□ -1.65
PTPN22-207ENST00000528414 TRPM7Q96QT4 1865 aa4.76□□□□□ -1.65
PTPN22-207ENST00000528414 IDI1Q13907 227 aa4.75□□□□□ -1.65
PTPN22-207ENST00000528414 ZKSCAN2Q63HK3 967 aa4.75□□□□□ -1.65
PTPN22-207ENST00000528414 TXNDC2Q86VQ3 553 aa4.75□□□□□ -1.65
PTPN22-207ENST00000528414 HELBQ8NG08 1087 aaPredicted RBP4.75□□□□□ -1.65
PTPN22-207ENST00000528414 MORC4Q8TE76 937 aa4.75□□□□□ -1.65
PTPN22-207ENST00000528414 SUPT16HQ9Y5B9 1047 aaKnown RBP4.75□□□□□ -1.65
PTPN22-207ENST00000528414 NUP155O75694 1391 aa4.75□□□□□ -1.65
PTPN22-207ENST00000528414 CCDC181Q5TID7 509 aa4.75□□□□□ -1.65
PTPN22-207ENST00000528414 CXorf38Q8TB03 319 aa4.75□□□□□ -1.65
PTPN22-207ENST00000528414 RBM46Q8TBY0 533 aaKnown RBP4.75□□□□□ -1.65
PTPN22-207ENST00000528414 FAM117AQ9C073 453 aa4.75□□□□□ -1.65
PTPN22-207ENST00000528414 GPRASP1Q5JY77 1395 aa4.75□□□□□ -1.65
PTPN22-207ENST00000528414 CPSF1Q10570 1443 aaKnown RBP4.75□□□□□ -1.65
PTPN22-207ENST00000528414 RTL1A6NKG5 1358 aa4.75□□□□□ -1.65
PTPN22-207ENST00000528414 CRB1P82279 1406 aa4.75□□□□□ -1.65
PTPN22-207ENST00000528414 CFAP65Q6ZU64 1925 aaKnown RBP4.74□□□□□ -1.65
PTPN22-207ENST00000528414 CCDC194A0A1B0GVG4 234 aa4.74□□□□□ -1.65
PTPN22-207ENST00000528414 NRDCO43847 1150 aa4.74□□□□□ -1.65
PTPN22-207ENST00000528414 CREBRFQ8IUR6 639 aa4.74□□□□□ -1.65
PTPN22-207ENST00000528414 STK26Q9P289 416 aa4.74□□□□□ -1.65
PTPN22-207ENST00000528414 CFAP69A5D8W1 941 aa4.74□□□□□ -1.65
PTPN22-207ENST00000528414 SLC16A10Q8TF71 515 aa4.74□□□□□ -1.65
PTPN22-207ENST00000528414 KDM4CQ9H3R0 1056 aa4.74□□□□□ -1.65
PTPN22-207ENST00000528414 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.74□□□□□ -1.65
PTPN22-207ENST00000528414 MAGEC2Q9UBF1 373 aaPredicted RBP4.74□□□□□ -1.65
PTPN22-207ENST00000528414 MEGF6O75095 1541 aa4.74□□□□□ -1.65
PTPN22-207ENST00000528414 KCPQ6ZWJ8 1503 aa4.74□□□□□ -1.65
PTPN22-207ENST00000528414 RBM47A0AV96 593 aaKnown RBP4.74□□□□□ -1.65
PTPN22-207ENST00000528414 CT47B1P0C2W7 299 aaPredicted RBP4.74□□□□□ -1.65
PTPN22-207ENST00000528414 ATXN8OSP0DMR3 200 aa4.74□□□□□ -1.65
PTPN22-207ENST00000528414 HNRNPMP52272 730 aaKnown RBP eCLIP4.74□□□□□ -1.65
PTPN22-207ENST00000528414 NBPF6Q5VWK0 638 aa4.74□□□□□ -1.65
PTPN22-207ENST00000528414 FBXO31Q5XUX0 539 aaPredicted RBP4.74□□□□□ -1.65
PTPN22-207ENST00000528414 NBPF5PQ86XG9 351 aaPredicted RBP4.74□□□□□ -1.65
PTPN22-207ENST00000528414 NBPF4Q96M43 638 aa4.74□□□□□ -1.65
PTPN22-207ENST00000528414 CCDC7Q96M83 1385 aa4.73□□□□□ -1.65
PTPN22-207ENST00000528414 U2SURPO15042 1029 aaKnown RBP4.73□□□□□ -1.65
PTPN22-207ENST00000528414 MAP2K1Q02750 393 aaPredicted RBP4.73□□□□□ -1.65
PTPN22-207ENST00000528414 HDAC1Q13547 482 aaPredicted RBP4.73□□□□□ -1.65
PTPN22-207ENST00000528414 PUS10Q3MIT2 529 aaKnown RBP4.73□□□□□ -1.65
PTPN22-207ENST00000528414 RNF217Q8TC41 542 aa4.73□□□□□ -1.65
PTPN22-207ENST00000528414 IRF2BPLQ9H1B7 796 aa4.73□□□□□ -1.65
PTPN22-207ENST00000528414 ANKRD36CQ5JPF3 1778 aa4.73□□□□□ -1.65
PTPN22-207ENST00000528414 GTPBP6O43824 516 aaPredicted RBP4.73□□□□□ -1.65
PTPN22-207ENST00000528414 TDO2P48775 406 aa4.73□□□□□ -1.65
PTPN22-207ENST00000528414 PROCA1Q8NCQ7 364 aaPredicted RBP4.73□□□□□ -1.65
PTPN22-207ENST00000528414 SREK1Q8WXA9 508 aaKnown RBP4.73□□□□□ -1.65
PTPN22-207ENST00000528414 GNL3LQ9NVN8 582 aaKnown RBP4.73□□□□□ -1.65
PTPN22-207ENST00000528414 CAPN2P17655 700 aa4.72□□□□□ -1.65
PTPN22-207ENST00000528414 PSME1Q06323 249 aa4.72□□□□□ -1.65
PTPN22-207ENST00000528414 C11orf96Q7Z7L8 435 aa4.72□□□□□ -1.65
PTPN22-207ENST00000528414 GEMIN8Q9NWZ8 242 aaKnown RBP4.72□□□□□ -1.65
PTPN22-207ENST00000528414 FEZ2Q9UHY8 353 aaPredicted RBP4.72□□□□□ -1.65
PTPN22-207ENST00000528414 MAP3K19Q56UN5 1328 aa4.72□□□□□ -1.65
PTPN22-207ENST00000528414 PROM2Q8N271 834 aa4.72□□□□□ -1.65
PTPN22-207ENST00000528414 SPOCK3Q9BQ16 436 aa4.72□□□□□ -1.65
PTPN22-207ENST00000528414 YY1AP1Q9H869 796 aa4.72□□□□□ -1.65
PTPN22-207ENST00000528414 SPATA31A1Q5TZJ5 1347 aa4.72□□□□□ -1.65
PTPN22-207ENST00000528414 LIG1P18858 919 aa4.72□□□□□ -1.65
PTPN22-207ENST00000528414 KCNA1Q09470 495 aa4.72□□□□□ -1.65
PTPN22-207ENST00000528414 UVSSAQ2YD98 709 aa4.72□□□□□ -1.65
PTPN22-207ENST00000528414 P3H3Q8IVL6 736 aa4.72□□□□□ -1.65
PTPN22-207ENST00000528414 MRRFQ96E11 262 aaKnown RBP4.72□□□□□ -1.65
PTPN22-207ENST00000528414 RAI14Q9P0K7 980 aa4.72□□□□□ -1.65
PTPN22-207ENST00000528414 KIF3BO15066 747 aa4.71□□□□□ -1.65
PTPN22-207ENST00000528414 SH3BP5O60239 455 aa4.71□□□□□ -1.65
PTPN22-207ENST00000528414 C1QTNF12Q5T7M4 302 aa4.71□□□□□ -1.65
PTPN22-207ENST00000528414 LARGE2Q8N3Y3 721 aa4.71□□□□□ -1.65
PTPN22-207ENST00000528414 BSDC1Q9NW68 430 aaPredicted RBP4.71□□□□□ -1.65
PTPN22-207ENST00000528414 GABBR1Q9UBS5 961 aa4.71□□□□□ -1.65
PTPN22-207ENST00000528414 ARAP2Q8WZ64 1704 aa4.71□□□□□ -1.66
PTPN22-207ENST00000528414 EVA1CP58658 441 aa4.71□□□□□ -1.66
PTPN22-207ENST00000528414 SLC20A2Q08357 652 aa4.71□□□□□ -1.66
PTPN22-207ENST00000528414 C4orf46Q504U0 113 aa4.71□□□□□ -1.66
PTPN22-207ENST00000528414 CEP126Q9P2H0 1117 aa4.71□□□□□ -1.66
PTPN22-207ENST00000528414 FAN1Q9Y2M0 1017 aa4.71□□□□□ -1.66
PTPN22-207ENST00000528414 CARNS1A5YM72 827 aa4.71□□□□□ -1.66
PTPN22-207ENST00000528414 IGHDP01880 384 aa4.71□□□□□ -1.66
PTPN22-207ENST00000528414 ZKSCAN8Q15776 578 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms