RNA–Protein interactions for RNA: ENST00000527875.1

FOXRED1-208, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 3

Gene FOXRED1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-208ENST00000527875 RC3H1Q5TC82 1133 aaKnown RBP22.35■■□□□ 1.17
FOXRED1-208ENST00000527875 SPINK5Q9NQ38 1064 aaPredicted RBP22.35■■□□□ 1.17
FOXRED1-208ENST00000527875 TFCP2L1Q9NZI6 479 aa22.35■■□□□ 1.17
FOXRED1-208ENST00000527875 USP16Q9Y5T5 823 aa22.35■■□□□ 1.17
FOXRED1-208ENST00000527875 PSDA5PKW4 1024 aaPredicted RBP22.34■■□□□ 1.17
FOXRED1-208ENST00000527875 GNPATO15228 680 aa22.34■■□□□ 1.17
FOXRED1-208ENST00000527875 GOLGA2Q08379 1002 aa22.33■■□□□ 1.17
FOXRED1-208ENST00000527875 INTS5Q6P9B9 1019 aaKnown RBP22.33■■□□□ 1.17
FOXRED1-208ENST00000527875 CCDC87Q9NVE4 849 aa22.33■■□□□ 1.17
FOXRED1-208ENST00000527875 FANCIQ9NVI1 1328 aa22.32■■□□□ 1.16
FOXRED1-208ENST00000527875 SMIM5Q71RC9 77 aa22.31■■□□□ 1.16
FOXRED1-208ENST00000527875 AMIGO3Q86WK7 504 aa22.31■■□□□ 1.16
FOXRED1-208ENST00000527875 MYH16Q9H6N6 1097 aa22.31■■□□□ 1.16
FOXRED1-208ENST00000527875 ZBTB1Q9Y2K1 713 aa22.3■■□□□ 1.16
FOXRED1-208ENST00000527875 RTCBQ9Y3I0 505 aaKnown RBP22.3■■□□□ 1.16
FOXRED1-208ENST00000527875 CASZ1Q86V15 1759 aa22.3■■□□□ 1.16
FOXRED1-208ENST00000527875 PNPLA7Q6ZV29 1317 aa22.3■■□□□ 1.16
FOXRED1-208ENST00000527875 RPS6KA4O75676 772 aa22.29■■□□□ 1.16
FOXRED1-208ENST00000527875 PHF14O94880 888 aa22.29■■□□□ 1.16
FOXRED1-208ENST00000527875 A1BGP04217 495 aa22.29■■□□□ 1.16
FOXRED1-208ENST00000527875 DUSP27Q5VZP5 1158 aa22.29■■□□□ 1.16
FOXRED1-208ENST00000527875 C8orf58Q8NAV2 365 aa22.29■■□□□ 1.16
FOXRED1-208ENST00000527875 E9PSI1 815 aa22.28■■□□□ 1.16
FOXRED1-208ENST00000527875 ELL2O00472 640 aaPredicted RBP22.28■■□□□ 1.16
FOXRED1-208ENST00000527875 CANXP27824 592 aaKnown RBP22.28■■□□□ 1.16
FOXRED1-208ENST00000527875 CDCA7LQ96GN5 454 aa22.28■■□□□ 1.16
FOXRED1-208ENST00000527875 C4AP0C0L4 1744 aa22.28■■□□□ 1.16
FOXRED1-208ENST00000527875 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.27■■□□□ 1.16
FOXRED1-208ENST00000527875 HOXB7P09629 217 aa22.27■■□□□ 1.16
FOXRED1-208ENST00000527875 EIF2S2P20042 333 aaKnown RBP22.27■■□□□ 1.16
FOXRED1-208ENST00000527875 SSFA2P28290 1259 aa22.27■■□□□ 1.16
FOXRED1-208ENST00000527875 PIP4K2AP48426 406 aaPredicted RBP22.27■■□□□ 1.16
FOXRED1-208ENST00000527875 SLFN5Q08AF3 891 aa22.27■■□□□ 1.16
FOXRED1-208ENST00000527875 PDGFDQ9GZP0 370 aaPredicted RBP22.27■■□□□ 1.16
FOXRED1-208ENST00000527875 COL23A1Q86Y22 540 aaPredicted RBP22.26■■□□□ 1.15
FOXRED1-208ENST00000527875 TSPYL6Q8N831 410 aa22.26■■□□□ 1.15
FOXRED1-208ENST00000527875 NECTIN2Q92692 538 aa22.26■■□□□ 1.15
FOXRED1-208ENST00000527875 SOS1Q07889 1333 aaPredicted RBP22.26■■□□□ 1.15
FOXRED1-208ENST00000527875 ZBED9Q6R2W3 1325 aa22.26■■□□□ 1.15
FOXRED1-208ENST00000527875 FLAD1Q8NFF5 587 aa22.25■■□□□ 1.15
FOXRED1-208ENST00000527875 NBPF26B4DH59 902 aa22.24■■□□□ 1.15
FOXRED1-208ENST00000527875 MSH5O43196 834 aa22.24■■□□□ 1.15
FOXRED1-208ENST00000527875 EXOSC9Q06265 439 aaKnown RBP22.24■■□□□ 1.15
FOXRED1-208ENST00000527875 TRAPPC3LQ5T215 181 aa22.24■■□□□ 1.15
FOXRED1-208ENST00000527875 NBPF10Q6P3W6 841 aaKnown RBP22.24■■□□□ 1.15
FOXRED1-208ENST00000527875 NBPF15Q8N660 670 aa22.24■■□□□ 1.15
FOXRED1-208ENST00000527875 ADRA2BP18089 450 aa22.23■■□□□ 1.15
FOXRED1-208ENST00000527875 HDGFL1Q5TGJ6 251 aa22.23■■□□□ 1.15
FOXRED1-208ENST00000527875 ARHGEF1Q92888 912 aaKnown RBP22.23■■□□□ 1.15
FOXRED1-208ENST00000527875 ZNF330Q9Y3S2 320 aaPredicted RBP22.23■■□□□ 1.15
FOXRED1-208ENST00000527875 COL15A1P39059 1388 aa22.23■■□□□ 1.15
FOXRED1-208ENST00000527875 IL6STP40189 918 aaPredicted RBP22.22■■□□□ 1.15
FOXRED1-208ENST00000527875 EIF5P55010 431 aaKnown RBP22.22■■□□□ 1.15
FOXRED1-208ENST00000527875 TWISTNBQ3B726 338 aaPredicted RBP22.22■■□□□ 1.15
FOXRED1-208ENST00000527875 TRMT2AQ8IZ69 625 aaKnown RBP22.21■■□□□ 1.15
FOXRED1-208ENST00000527875 ERBB4Q15303 1308 aa22.21■■□□□ 1.15
FOXRED1-208ENST00000527875 MYL6BP14649 208 aa22.2■■□□□ 1.14
FOXRED1-208ENST00000527875 RFC4P35249 363 aa22.2■■□□□ 1.14
FOXRED1-208ENST00000527875 PDIA6Q15084 440 aa22.19■■□□□ 1.14
FOXRED1-208ENST00000527875 PROSER3Q2NL68 480 aa22.19■■□□□ 1.14
FOXRED1-208ENST00000527875 NPM2Q86SE8 214 aaKnown RBP22.19■■□□□ 1.14
FOXRED1-208ENST00000527875 CHPF2Q9P2E5 772 aa22.19■■□□□ 1.14
FOXRED1-208ENST00000527875 ANXA1P04083 346 aa22.18■■□□□ 1.14
FOXRED1-208ENST00000527875 A0A087WZG4 1122 aa22.17■■□□□ 1.14
FOXRED1-208ENST00000527875 VAMP4O75379 141 aa22.17■■□□□ 1.14
FOXRED1-208ENST00000527875 ZBTB7AO95365 584 aa22.17■■□□□ 1.14
FOXRED1-208ENST00000527875 CCDC30Q5VVM6 783 aa22.17■■□□□ 1.14
FOXRED1-208ENST00000527875 SLC16A10Q8TF71 515 aa22.17■■□□□ 1.14
FOXRED1-208ENST00000527875 YTHDC1Q96MU7 727 aaKnown RBP22.17■■□□□ 1.14
FOXRED1-208ENST00000527875 ARXQ96QS3 562 aa22.17■■□□□ 1.14
FOXRED1-208ENST00000527875 DDX21Q9NR30 783 aaKnown RBP eCLIP22.17■■□□□ 1.14
FOXRED1-208ENST00000527875 SRP68Q9UHB9 627 aaKnown RBP22.17■■□□□ 1.14
FOXRED1-208ENST00000527875 BCORQ6W2J9 1755 aa22.17■■□□□ 1.14
FOXRED1-208ENST00000527875 SCN7AQ01118 1682 aa22.17■■□□□ 1.14
FOXRED1-208ENST00000527875 USP42Q9H9J4 1324 aaKnown RBP22.16■■□□□ 1.14
FOXRED1-208ENST00000527875 CHMP4AQ9BY43 222 aa22.16■■□□□ 1.14
FOXRED1-208ENST00000527875 DBF4Q9UBU7 674 aaPredicted RBP22.16■■□□□ 1.14
FOXRED1-208ENST00000527875 TBC1D2BQ9UPU7 963 aa22.16■■□□□ 1.14
FOXRED1-208ENST00000527875 CACNA1FO60840 1977 aa22.16■■□□□ 1.14
FOXRED1-208ENST00000527875 COL24A1Q17RW2 1714 aa22.15■■□□□ 1.14
FOXRED1-208ENST00000527875 ZPR1O75312 459 aa22.15■■□□□ 1.14
FOXRED1-208ENST00000527875 LRP10Q7Z4F1 713 aa22.15■■□□□ 1.14
FOXRED1-208ENST00000527875 DZIP3Q86Y13 1208 aaKnown RBP22.15■■□□□ 1.14
FOXRED1-208ENST00000527875 NARFQ9UHQ1 456 aa22.15■■□□□ 1.14
FOXRED1-208ENST00000527875 TCERG1O14776 1098 aaKnown RBP22.14■■□□□ 1.13
FOXRED1-208ENST00000527875 USPL1Q5W0Q7 1092 aa22.14■■□□□ 1.13
FOXRED1-208ENST00000527875 MSL1Q68DK7 614 aa22.14■■□□□ 1.13
FOXRED1-208ENST00000527875 MTFR1LQ9H019 292 aa22.14■■□□□ 1.13
FOXRED1-208ENST00000527875 ATF5Q9Y2D1 282 aaPredicted RBP22.14■■□□□ 1.13
FOXRED1-208ENST00000527875 GYS1P13807 737 aa22.12■■□□□ 1.13
FOXRED1-208ENST00000527875 TTLL7Q6ZT98 887 aa22.12■■□□□ 1.13
FOXRED1-208ENST00000527875 STK31Q9BXU1 1019 aa22.12■■□□□ 1.13
FOXRED1-208ENST00000527875 HYPKQ9NX55 129 aa22.12■■□□□ 1.13
FOXRED1-208ENST00000527875 NUP98P52948 1817 aa22.11■■□□□ 1.13
FOXRED1-208ENST00000527875 CAMTA2O94983 1202 aa22.11■■□□□ 1.13
FOXRED1-208ENST00000527875 AIMP1Q12904 312 aaKnown RBP22.11■■□□□ 1.13
FOXRED1-208ENST00000527875 XAGE3Q8WTP9 111 aa22.11■■□□□ 1.13
FOXRED1-208ENST00000527875 COPS6Q7L5N1 327 aa22.1■■□□□ 1.13
FOXRED1-208ENST00000527875 BCL2L12Q9HB09 334 aa22.1■■□□□ 1.13
FOXRED1-208ENST00000527875 FKBP8Q14318 412 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms