RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 SMYD5Q6GMV2 418 aa6.02□□□□□ -1.45
CHD7-205ENST00000527825 NGDNQ8NEJ9 315 aaKnown RBP6.02□□□□□ -1.45
CHD7-205ENST00000527825 SLC16A10Q8TF71 515 aa6.02□□□□□ -1.45
CHD7-205ENST00000527825 TSR3Q9UJK0 312 aaKnown RBP6.02□□□□□ -1.45
CHD7-205ENST00000527825 TULP4Q9NRJ4 1543 aa6.02□□□□□ -1.45
CHD7-205ENST00000527825 ADCY9O60503 1353 aa6.02□□□□□ -1.45
CHD7-205ENST00000527825 PAPPAQ13219 1627 aa6.02□□□□□ -1.45
CHD7-205ENST00000527825 ACIN1Q9UKV3 1341 aaKnown RBP6.01□□□□□ -1.45
CHD7-205ENST00000527825 LMO7Q8WWI1 1683 aa6.01□□□□□ -1.45
CHD7-205ENST00000527825 ANKARQ7Z5J8 1434 aa6.01□□□□□ -1.45
CHD7-205ENST00000527825 SAFB2Q14151 953 aaKnown RBP eCLIP6.01□□□□□ -1.45
CHD7-205ENST00000527825 ABCC11Q96J66 1382 aa6.01□□□□□ -1.45
CHD7-205ENST00000527825 ANKRD30BQ9BXX2 1392 aa6.01□□□□□ -1.45
CHD7-205ENST00000527825 CRB1P82279 1406 aa6□□□□□ -1.45
CHD7-205ENST00000527825 ZBTB7CA1YPR0 619 aa6□□□□□ -1.45
CHD7-205ENST00000527825 NBPF26B4DH59 902 aa6□□□□□ -1.45
CHD7-205ENST00000527825 RGS20O76081 388 aa6□□□□□ -1.45
CHD7-205ENST00000527825 HSPA1AP0DMV8 641 aaKnown RBP6□□□□□ -1.45
CHD7-205ENST00000527825 HSPA1BP0DMV9 641 aaKnown RBP6□□□□□ -1.45
CHD7-205ENST00000527825 HTRA3P83110 453 aa6□□□□□ -1.45
CHD7-205ENST00000527825 TMEM132EQ6IEE7 984 aa6□□□□□ -1.45
CHD7-205ENST00000527825 PTF1AQ7RTS3 328 aa6□□□□□ -1.45
CHD7-205ENST00000527825 SAMD7Q7Z3H4 446 aa6□□□□□ -1.45
CHD7-205ENST00000527825 TATDN2Q93075 761 aa6□□□□□ -1.45
CHD7-205ENST00000527825 PNMA3Q9UL41 463 aa6□□□□□ -1.45
CHD7-205ENST00000527825 EIF3AQ14152 1382 aaKnown RBP6□□□□□ -1.45
CHD7-205ENST00000527825 YTHDC2Q9H6S0 1430 aaKnown RBP5.99□□□□□ -1.45
CHD7-205ENST00000527825 RGPD5Q99666 1765 aa5.99□□□□□ -1.45
CHD7-205ENST00000527825 FAM161AQ3B820 660 aa5.99□□□□□ -1.45
CHD7-205ENST00000527825 NUTM2GQ5VZR2 741 aa5.99□□□□□ -1.45
CHD7-205ENST00000527825 POGKQ9P215 609 aa5.99□□□□□ -1.45
CHD7-205ENST00000527825 RBM27Q9P2N5 1060 aaKnown RBP5.99□□□□□ -1.45
CHD7-205ENST00000527825 KIAA1210Q9ULL0 1709 aa5.99□□□□□ -1.45
CHD7-205ENST00000527825 TNS2Q63HR2 1409 aa5.99□□□□□ -1.45
CHD7-205ENST00000527825 COL5A2P05997 1499 aaPredicted RBP5.98□□□□□ -1.45
CHD7-205ENST00000527825 KCNC4Q03721 635 aa5.98□□□□□ -1.45
CHD7-205ENST00000527825 RBM26Q5T8P6 1007 aaKnown RBP5.98□□□□□ -1.45
CHD7-205ENST00000527825 PADI6Q6TGC4 694 aa5.98□□□□□ -1.45
CHD7-205ENST00000527825 NUDT18Q6ZVK8 323 aa5.98□□□□□ -1.45
CHD7-205ENST00000527825 TOM1L2Q6ZVM7 507 aa5.98□□□□□ -1.45
CHD7-205ENST00000527825 RBM46Q8TBY0 533 aaKnown RBP5.98□□□□□ -1.45
CHD7-205ENST00000527825 NPDC1Q9NQX5 325 aaPredicted RBP5.98□□□□□ -1.45
CHD7-205ENST00000527825 TFCP2L1Q9NZI6 479 aa5.98□□□□□ -1.45
CHD7-205ENST00000527825 ROCK1Q13464 1354 aa5.97□□□□□ -1.45
CHD7-205ENST00000527825 TRPM1Q7Z4N2 1603 aa5.97□□□□□ -1.45
CHD7-205ENST00000527825 TULP1O00294 542 aaPredicted RBP5.97□□□□□ -1.45
CHD7-205ENST00000527825 PPP4CP60510 307 aa5.97□□□□□ -1.45
CHD7-205ENST00000527825 FSTL1Q12841 308 aa5.97□□□□□ -1.45
CHD7-205ENST00000527825 ZNF827Q17R98 1081 aa5.97□□□□□ -1.45
CHD7-205ENST00000527825 MARCH10Q8NA82 808 aaPredicted RBP5.97□□□□□ -1.45
CHD7-205ENST00000527825 TTC13Q8NBP0 860 aa5.97□□□□□ -1.45
CHD7-205ENST00000527825 SIRT1Q96EB6 747 aa5.97□□□□□ -1.45
CHD7-205ENST00000527825 PRAM1Q96QH2 718 aa5.97□□□□□ -1.45
CHD7-205ENST00000527825 HIRIP3Q9BW71 556 aaPredicted RBP5.97□□□□□ -1.45
CHD7-205ENST00000527825 CDCA7Q9BWT1 371 aaPredicted RBP5.97□□□□□ -1.45
CHD7-205ENST00000527825 BCL9O00512 1426 aa5.97□□□□□ -1.45
CHD7-205ENST00000527825 TNRC6CQ9HCJ0 1690 aaKnown RBP5.97□□□□□ -1.45
CHD7-205ENST00000527825 ADGRF5Q8IZF2 1346 aa5.97□□□□□ -1.45
CHD7-205ENST00000527825 BRD4O60885 1362 aaPredicted RBP5.96□□□□□ -1.45
CHD7-205ENST00000527825 EXOC5O00471 708 aa5.96□□□□□ -1.46
CHD7-205ENST00000527825 MLLT1Q03111 559 aaPredicted RBP5.96□□□□□ -1.46
CHD7-205ENST00000527825 PTGDRQ13258 359 aa5.96□□□□□ -1.46
CHD7-205ENST00000527825 ACSBG1Q96GR2 724 aa5.96□□□□□ -1.46
CHD7-205ENST00000527825 PKD1L3Q7Z443 1732 aa5.96□□□□□ -1.46
CHD7-205ENST00000527825 CPDO75976 1380 aa5.95□□□□□ -1.46
CHD7-205ENST00000527825 RNF40O75150 1001 aa5.95□□□□□ -1.46
CHD7-205ENST00000527825 CD2APQ9Y5K6 639 aa5.95□□□□□ -1.46
CHD7-205ENST00000527825 PNPLA7Q6ZV29 1317 aa5.95□□□□□ -1.46
CHD7-205ENST00000527825 CSB-PGBD3P0DP91 1061 aa5.94□□□□□ -1.46
CHD7-205ENST00000527825 ITGAEP38570 1179 aa5.94□□□□□ -1.46
CHD7-205ENST00000527825 RGL3Q3MIN7 710 aa5.94□□□□□ -1.46
CHD7-205ENST00000527825 ABTB2Q8N961 1025 aa5.94□□□□□ -1.46
CHD7-205ENST00000527825 NMRK2Q9NPI5 230 aa5.94□□□□□ -1.46
CHD7-205ENST00000527825 USP19O94966 1318 aa5.94□□□□□ -1.46
CHD7-205ENST00000527825 MINK1Q8N4C8 1332 aaPredicted RBP5.94□□□□□ -1.46
CHD7-205ENST00000527825 IGSF1Q8N6C5 1336 aa5.94□□□□□ -1.46
CHD7-205ENST00000527825 LY75O60449 1722 aa5.94□□□□□ -1.46
CHD7-205ENST00000527825 N4BP2Q86UW6 1770 aaPredicted RBP5.93□□□□□ -1.46
CHD7-205ENST00000527825 GOLGB1Q14789 3259 aaKnown RBP5.93□□□□□ -1.46
CHD7-205ENST00000527825 USP6P35125 1406 aa5.93□□□□□ -1.46
CHD7-205ENST00000527825 CICQ96RK0 1608 aaPredicted RBP5.93□□□□□ -1.46
CHD7-205ENST00000527825 FCHSD2O94868 740 aa5.93□□□□□ -1.46
CHD7-205ENST00000527825 TJAP1Q5JTD0 557 aa5.93□□□□□ -1.46
CHD7-205ENST00000527825 SLC27A3Q5K4L6 730 aa5.93□□□□□ -1.46
CHD7-205ENST00000527825 SWT1Q5T5J6 900 aaKnown RBP5.93□□□□□ -1.46
CHD7-205ENST00000527825 MSL1Q68DK7 614 aa5.93□□□□□ -1.46
CHD7-205ENST00000527825 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.93□□□□□ -1.46
CHD7-205ENST00000527825 NLRP13Q86W25 1043 aa5.93□□□□□ -1.46
CHD7-205ENST00000527825 IRX2Q9BZI1 471 aaPredicted RBP5.93□□□□□ -1.46
CHD7-205ENST00000527825 PIK3C2GO75747 1445 aa5.92□□□□□ -1.46
CHD7-205ENST00000527825 GCP02774 474 aa5.92□□□□□ -1.46
CHD7-205ENST00000527825 GPIHBP1Q8IV16 184 aa5.92□□□□□ -1.46
CHD7-205ENST00000527825 SMC1BQ8NDV3 1235 aa5.92□□□□□ -1.46
CHD7-205ENST00000527825 AIDAQ96BJ3 306 aa5.92□□□□□ -1.46
CHD7-205ENST00000527825 EYA1Q99502 592 aa5.92□□□□□ -1.46
CHD7-205ENST00000527825 MTRQ99707 1265 aa5.92□□□□□ -1.46
CHD7-205ENST00000527825 LRRC4BQ9NT99 713 aa5.92□□□□□ -1.46
CHD7-205ENST00000527825 WDR17Q8IZU2 1322 aa5.92□□□□□ -1.46
CHD7-205ENST00000527825 KDM2BQ8NHM5 1336 aa5.92□□□□□ -1.46
CHD7-205ENST00000527825 PRR36Q9H6K5 1346 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms