RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 ADRA2BP18089 450 aa21.31■■□□□ 1
SSSCA1-202ENST00000526433 POLD1P28340 1107 aa21.31■■□□□ 1
SSSCA1-202ENST00000526433 ARXQ96QS3 562 aa21.3■■□□□ 1
SSSCA1-202ENST00000526433 SNRPA1P09661 255 aaKnown RBP21.29■■□□□ 1
SSSCA1-202ENST00000526433 RFC4P35249 363 aa21.29■■□□□ 1
SSSCA1-202ENST00000526433 COL24A1Q17RW2 1714 aa21.29■■□□□ 1
SSSCA1-202ENST00000526433 ZBTB1Q9Y2K1 713 aa21.28■■□□□ 1
SSSCA1-202ENST00000526433 USP16Q9Y5T5 823 aa21.28■■□□□ 1
SSSCA1-202ENST00000526433 PRAMEF22A3QJZ6 481 aa21.27■■□□□ 1
SSSCA1-202ENST00000526433 CANXP27824 592 aaKnown RBP21.27■■□□□ 1
SSSCA1-202ENST00000526433 SOS1Q07889 1333 aaPredicted RBP21.27■□□□□ 0.99
SSSCA1-202ENST00000526433 A1BGP04217 495 aa21.26■□□□□ 0.99
SSSCA1-202ENST00000526433 EIF4A1P60842 406 aaKnown RBP21.26■□□□□ 0.99
SSSCA1-202ENST00000526433 BABAM1Q9NWV8 329 aa21.26■□□□□ 0.99
SSSCA1-202ENST00000526433 TSPYL4Q9UJ04 414 aa21.26■□□□□ 0.99
SSSCA1-202ENST00000526433 KDM3BQ7LBC6 1761 aa21.24■□□□□ 0.99
SSSCA1-202ENST00000526433 NLGN1Q8N2Q7 840 aa21.24■□□□□ 0.99
SSSCA1-202ENST00000526433 FHDC1Q9C0D6 1143 aaPredicted RBP21.24■□□□□ 0.99
SSSCA1-202ENST00000526433 SRP68Q9UHB9 627 aaKnown RBP21.24■□□□□ 0.99
SSSCA1-202ENST00000526433 GIGYF1O75420 1035 aaPredicted RBP21.23■□□□□ 0.99
SSSCA1-202ENST00000526433 GYS1P13807 737 aa21.23■□□□□ 0.99
SSSCA1-202ENST00000526433 EIF5P55010 431 aaKnown RBP21.23■□□□□ 0.99
SSSCA1-202ENST00000526433 FAM9BQ8IZU0 186 aa21.23■□□□□ 0.99
SSSCA1-202ENST00000526433 LAS1LQ9Y4W2 734 aaKnown RBP21.23■□□□□ 0.99
SSSCA1-202ENST00000526433 SENP3-EIF4A1A0A087X0R7 540 aa21.22■□□□□ 0.99
SSSCA1-202ENST00000526433 CHL1O00533 1208 aa21.22■□□□□ 0.99
SSSCA1-202ENST00000526433 SYT17Q9BSW7 474 aa21.22■□□□□ 0.99
SSSCA1-202ENST00000526433 ZPR1O75312 459 aa21.21■□□□□ 0.99
SSSCA1-202ENST00000526433 IL6STP40189 918 aaPredicted RBP21.21■□□□□ 0.99
SSSCA1-202ENST00000526433 NARFQ9UHQ1 456 aa21.21■□□□□ 0.99
SSSCA1-202ENST00000526433 USP42Q9H9J4 1324 aaKnown RBP21.21■□□□□ 0.99
SSSCA1-202ENST00000526433 A0A087WZG4 1122 aa21.2■□□□□ 0.98
SSSCA1-202ENST00000526433 KLHL34Q8N239 644 aa21.2■□□□□ 0.98
SSSCA1-202ENST00000526433 C4AP0C0L4 1744 aa21.2■□□□□ 0.98
SSSCA1-202ENST00000526433 COL15A1P39059 1388 aa21.2■□□□□ 0.98
SSSCA1-202ENST00000526433 PIP4K2AP48426 406 aaPredicted RBP21.19■□□□□ 0.98
SSSCA1-202ENST00000526433 USPL1Q5W0Q7 1092 aa21.19■□□□□ 0.98
SSSCA1-202ENST00000526433 ZNF330Q9Y3S2 320 aaPredicted RBP21.19■□□□□ 0.98
SSSCA1-202ENST00000526433 MMP10P09238 476 aa21.18■□□□□ 0.98
SSSCA1-202ENST00000526433 FKBP8Q14318 412 aa21.18■□□□□ 0.98
SSSCA1-202ENST00000526433 NPM2Q86SE8 214 aaKnown RBP21.18■□□□□ 0.98
SSSCA1-202ENST00000526433 CFAP44Q96MT7 982 aa21.18■□□□□ 0.98
SSSCA1-202ENST00000526433 NBPF26B4DH59 902 aa21.17■□□□□ 0.98
SSSCA1-202ENST00000526433 CALD1Q05682 793 aaKnown RBP21.17■□□□□ 0.98
SSSCA1-202ENST00000526433 NBPF10Q6P3W6 841 aaKnown RBP21.17■□□□□ 0.98
SSSCA1-202ENST00000526433 NBPF15Q8N660 670 aa21.17■□□□□ 0.98
SSSCA1-202ENST00000526433 TBC1D2BQ9UPU7 963 aa21.17■□□□□ 0.98
SSSCA1-202ENST00000526433 ZNF853P0CG23 659 aa21.16■□□□□ 0.98
SSSCA1-202ENST00000526433 CCDC27Q2M243 656 aa21.15■□□□□ 0.98
SSSCA1-202ENST00000526433 NCBP3Q53F19 620 aaKnown RBP21.15■□□□□ 0.98
SSSCA1-202ENST00000526433 DIEXFQ68CQ4 756 aaKnown RBP21.15■□□□□ 0.98
SSSCA1-202ENST00000526433 BCL2L12Q9HB09 334 aa21.15■□□□□ 0.98
SSSCA1-202ENST00000526433 CCER2I3L3R5 266 aa21.14■□□□□ 0.97
SSSCA1-202ENST00000526433 TM4SF1P30408 202 aa21.14■□□□□ 0.97
SSSCA1-202ENST00000526433 GNAI1P63096 354 aa21.14■□□□□ 0.97
SSSCA1-202ENST00000526433 WWC1Q8IX03 1113 aa21.14■□□□□ 0.97
SSSCA1-202ENST00000526433 IFT57Q9NWB7 429 aa21.14■□□□□ 0.97
SSSCA1-202ENST00000526433 PARP3Q9Y6F1 533 aa21.14■□□□□ 0.97
SSSCA1-202ENST00000526433 EIF2S2P20042 333 aaKnown RBP21.13■□□□□ 0.97
SSSCA1-202ENST00000526433 KRT24Q2M2I5 525 aa21.13■□□□□ 0.97
SSSCA1-202ENST00000526433 MBIPQ9NS73 344 aa21.13■□□□□ 0.97
SSSCA1-202ENST00000526433 SALL2Q9Y467 1007 aaPredicted RBP21.13■□□□□ 0.97
SSSCA1-202ENST00000526433 CD2APQ9Y5K6 639 aa21.13■□□□□ 0.97
SSSCA1-202ENST00000526433 DZIP3Q86Y13 1208 aaKnown RBP21.12■□□□□ 0.97
SSSCA1-202ENST00000526433 LAMB4A4D0S4 1761 aa21.11■□□□□ 0.97
SSSCA1-202ENST00000526433 NLGN2Q8NFZ4 835 aa21.11■□□□□ 0.97
SSSCA1-202ENST00000526433 CAMTA2O94983 1202 aa21.1■□□□□ 0.97
SSSCA1-202ENST00000526433 DDR1Q08345 913 aa21.1■□□□□ 0.97
SSSCA1-202ENST00000526433 NFIXQ14938 502 aa21.1■□□□□ 0.97
SSSCA1-202ENST00000526433 NGEFQ8N5V2 710 aa21.1■□□□□ 0.97
SSSCA1-202ENST00000526433 DCAF8L1A6NGE4 600 aa21.09■□□□□ 0.97
SSSCA1-202ENST00000526433 MYL6BP14649 208 aa21.09■□□□□ 0.97
SSSCA1-202ENST00000526433 ERBB4Q15303 1308 aa21.08■□□□□ 0.97
SSSCA1-202ENST00000526433 POLRMTO00411 1230 aaKnown RBP21.08■□□□□ 0.97
SSSCA1-202ENST00000526433 BICDL1Q6ZP65 573 aa21.08■□□□□ 0.97
SSSCA1-202ENST00000526433 NECTIN2Q92692 538 aa21.08■□□□□ 0.97
SSSCA1-202ENST00000526433 PDIA6Q15084 440 aa21.07■□□□□ 0.96
SSSCA1-202ENST00000526433 DUSP27Q5VZP5 1158 aa21.07■□□□□ 0.96
SSSCA1-202ENST00000526433 TBC1D9BQ66K14 1250 aa21.07■□□□□ 0.96
SSSCA1-202ENST00000526433 MIER1Q8N108 512 aa21.07■□□□□ 0.96
SSSCA1-202ENST00000526433 WDR63Q8IWG1 891 aa21.06■□□□□ 0.96
SSSCA1-202ENST00000526433 IL16Q14005 1332 aa21.05■□□□□ 0.96
SSSCA1-202ENST00000526433 SERPINB2P05120 415 aa21.05■□□□□ 0.96
SSSCA1-202ENST00000526433 HOXB7P09629 217 aa21.05■□□□□ 0.96
SSSCA1-202ENST00000526433 CLEC4GQ6UXB4 293 aa21.05■□□□□ 0.96
SSSCA1-202ENST00000526433 ELL2O00472 640 aaPredicted RBP21.04■□□□□ 0.96
SSSCA1-202ENST00000526433 ANXA1P04083 346 aa21.04■□□□□ 0.96
SSSCA1-202ENST00000526433 PROSER3Q2NL68 480 aa21.04■□□□□ 0.96
SSSCA1-202ENST00000526433 TTLL7Q6ZT98 887 aa21.04■□□□□ 0.96
SSSCA1-202ENST00000526433 C8orf58Q8NAV2 365 aa21.04■□□□□ 0.96
SSSCA1-202ENST00000526433 TSR2Q969E8 191 aaKnown RBP21.04■□□□□ 0.96
SSSCA1-202ENST00000526433 HLFQ16534 295 aa21.03■□□□□ 0.96
SSSCA1-202ENST00000526433 HDGFL1Q5TGJ6 251 aa21.03■□□□□ 0.96
SSSCA1-202ENST00000526433 SETDB2Q96T68 719 aa21.03■□□□□ 0.96
SSSCA1-202ENST00000526433 ZNF652Q9Y2D9 606 aa21.03■□□□□ 0.96
SSSCA1-202ENST00000526433 ERVV-1B6SEH8 477 aa21.02■□□□□ 0.96
SSSCA1-202ENST00000526433 RGL2O15211 777 aa21.02■□□□□ 0.96
SSSCA1-202ENST00000526433 TGFB2P61812 414 aa21.02■□□□□ 0.96
SSSCA1-202ENST00000526433 GPR162Q16538 588 aa21.02■□□□□ 0.96
SSSCA1-202ENST00000526433 LRP10Q7Z4F1 713 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms