RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 ZKSCAN2Q63HK3 967 aa18.45■□□□□ 0.54
COLCA2-202ENST00000526216 CRBNQ96SW2 442 aa18.45■□□□□ 0.54
COLCA2-202ENST00000526216 CICQ96RK0 1608 aaPredicted RBP18.44■□□□□ 0.54
COLCA2-202ENST00000526216 ANXA1P04083 346 aa18.44■□□□□ 0.54
COLCA2-202ENST00000526216 SLC4A2P04920 1241 aa18.44■□□□□ 0.54
COLCA2-202ENST00000526216 TRIM27P14373 513 aa18.44■□□□□ 0.54
COLCA2-202ENST00000526216 PROSER3Q2NL68 480 aa18.44■□□□□ 0.54
COLCA2-202ENST00000526216 KRT27Q7Z3Y8 459 aa18.44■□□□□ 0.54
COLCA2-202ENST00000526216 PANK1Q8TE04 598 aa18.44■□□□□ 0.54
COLCA2-202ENST00000526216 CHPF2Q9P2E5 772 aa18.44■□□□□ 0.54
COLCA2-202ENST00000526216 CANXP27824 592 aaKnown RBP18.43■□□□□ 0.54
COLCA2-202ENST00000526216 PDIA6Q15084 440 aa18.43■□□□□ 0.54
COLCA2-202ENST00000526216 ATF7IPQ6VMQ6 1270 aa18.43■□□□□ 0.54
COLCA2-202ENST00000526216 EXOC6Q8TAG9 804 aa18.43■□□□□ 0.54
COLCA2-202ENST00000526216 PDE3AQ14432 1141 aa18.42■□□□□ 0.54
COLCA2-202ENST00000526216 STK31Q9BXU1 1019 aa18.42■□□□□ 0.54
COLCA2-202ENST00000526216 DNAJC10Q8IXB1 793 aa18.41■□□□□ 0.54
COLCA2-202ENST00000526216 ARHGAP45Q92619 1136 aa18.41■□□□□ 0.54
COLCA2-202ENST00000526216 CLUAP1Q96AJ1 413 aa18.41■□□□□ 0.54
COLCA2-202ENST00000526216 RBM42Q9BTD8 480 aaKnown RBP18.41■□□□□ 0.54
COLCA2-202ENST00000526216 PHAXQ9H814 394 aaKnown RBP18.41■□□□□ 0.54
COLCA2-202ENST00000526216 PALLDQ8WX93 1383 aa18.41■□□□□ 0.54
COLCA2-202ENST00000526216 KAT6BQ8WYB5 2073 aa18.4■□□□□ 0.54
COLCA2-202ENST00000526216 CACNA1FO60840 1977 aa18.4■□□□□ 0.54
COLCA2-202ENST00000526216 ABCC4O15439 1325 aa18.4■□□□□ 0.54
COLCA2-202ENST00000526216 LRP10Q7Z4F1 713 aa18.4■□□□□ 0.54
COLCA2-202ENST00000526216 VSIG10Q8N0Z9 540 aa18.4■□□□□ 0.54
COLCA2-202ENST00000526216 ZNF831Q5JPB2 1677 aa18.39■□□□□ 0.53
COLCA2-202ENST00000526216 PIP4K2AP48426 406 aaPredicted RBP18.39■□□□□ 0.53
COLCA2-202ENST00000526216 FLIIQ13045 1269 aa18.39■□□□□ 0.53
COLCA2-202ENST00000526216 DZIP1LQ8IYY4 767 aaKnown RBP18.39■□□□□ 0.53
COLCA2-202ENST00000526216 PTPRCP08575 1304 aa18.38■□□□□ 0.53
COLCA2-202ENST00000526216 NBPF26B4DH59 902 aa18.38■□□□□ 0.53
COLCA2-202ENST00000526216 IPO8O15397 1037 aaKnown RBP18.38■□□□□ 0.53
COLCA2-202ENST00000526216 NBPF14Q5TI25 921 aa18.38■□□□□ 0.53
COLCA2-202ENST00000526216 NBPF10Q6P3W6 841 aaKnown RBP18.38■□□□□ 0.53
COLCA2-202ENST00000526216 NBPF15Q8N660 670 aa18.38■□□□□ 0.53
COLCA2-202ENST00000526216 DDX21Q9NR30 783 aaKnown RBP eCLIP18.38■□□□□ 0.53
COLCA2-202ENST00000526216 DBF4Q9UBU7 674 aaPredicted RBP18.38■□□□□ 0.53
COLCA2-202ENST00000526216 COG6Q9Y2V7 657 aa18.38■□□□□ 0.53
COLCA2-202ENST00000526216 RREB1Q92766 1687 aa18.38■□□□□ 0.53
COLCA2-202ENST00000526216 LY75O60449 1722 aa18.37■□□□□ 0.53
COLCA2-202ENST00000526216 TMEM57Q8N5G2 664 aa18.37■□□□□ 0.53
COLCA2-202ENST00000526216 API5Q9BZZ5 524 aaKnown RBP18.37■□□□□ 0.53
COLCA2-202ENST00000526216 COL5A3P25940 1745 aaPredicted RBP18.36■□□□□ 0.53
COLCA2-202ENST00000526216 A1BGP04217 495 aa18.36■□□□□ 0.53
COLCA2-202ENST00000526216 ITPK1Q13572 414 aa18.36■□□□□ 0.53
COLCA2-202ENST00000526216 FAM196AQ6ZSG2 479 aa18.36■□□□□ 0.53
COLCA2-202ENST00000526216 SMARCC1Q92922 1105 aaPredicted RBP18.36■□□□□ 0.53
COLCA2-202ENST00000526216 N4BP2Q86UW6 1770 aaPredicted RBP18.36■□□□□ 0.53
COLCA2-202ENST00000526216 ERBB4Q15303 1308 aa18.35■□□□□ 0.53
COLCA2-202ENST00000526216 LOC102724428A0A0B4J2F2 783 aa18.35■□□□□ 0.53
COLCA2-202ENST00000526216 F6X3S4 739 aa18.35■□□□□ 0.53
COLCA2-202ENST00000526216 CYP19A1P11511 503 aaPredicted RBP18.35■□□□□ 0.53
COLCA2-202ENST00000526216 SIK1P57059 783 aa18.35■□□□□ 0.53
COLCA2-202ENST00000526216 ERICH6BQ5W0A0 696 aa18.35■□□□□ 0.53
COLCA2-202ENST00000526216 CHMP4AQ9BY43 222 aa18.35■□□□□ 0.53
COLCA2-202ENST00000526216 BCL11BQ9C0K0 894 aaPredicted RBP18.35■□□□□ 0.53
COLCA2-202ENST00000526216 ADCY9O60503 1353 aa18.35■□□□□ 0.53
COLCA2-202ENST00000526216 MYL6BP14649 208 aa18.34■□□□□ 0.53
COLCA2-202ENST00000526216 MVPQ14764 893 aaKnown RBP18.34■□□□□ 0.53
COLCA2-202ENST00000526216 FTSJ3Q8IY81 847 aaKnown RBP18.34■□□□□ 0.53
COLCA2-202ENST00000526216 HYPKQ9NX55 129 aa18.34■□□□□ 0.53
COLCA2-202ENST00000526216 FKBP5Q13451 457 aaPredicted RBP18.33■□□□□ 0.53
COLCA2-202ENST00000526216 TEX13AQ9BXU3 409 aaPredicted RBP18.33■□□□□ 0.53
COLCA2-202ENST00000526216 PXDNLA1KZ92 1463 aa18.32■□□□□ 0.52
COLCA2-202ENST00000526216 MS4A1P11836 297 aa18.32■□□□□ 0.52
COLCA2-202ENST00000526216 TNS1Q9HBL0 1735 aaKnown RBP18.32■□□□□ 0.52
COLCA2-202ENST00000526216 TRIM37O94972 964 aa18.31■□□□□ 0.52
COLCA2-202ENST00000526216 ATP6V1AP38606 617 aa18.31■□□□□ 0.52
COLCA2-202ENST00000526216 KCNQ4P56696 695 aa18.31■□□□□ 0.52
COLCA2-202ENST00000526216 INTS3Q68E01 1043 aaKnown RBP18.31■□□□□ 0.52
COLCA2-202ENST00000526216 ILDR2Q71H61 639 aa18.31■□□□□ 0.52
COLCA2-202ENST00000526216 XAGE3Q8WTP9 111 aa18.31■□□□□ 0.52
COLCA2-202ENST00000526216 NUP188Q5SRE5 1749 aa18.31■□□□□ 0.52
COLCA2-202ENST00000526216 COPS6Q7L5N1 327 aa18.3■□□□□ 0.52
COLCA2-202ENST00000526216 ZBTB1Q9Y2K1 713 aa18.3■□□□□ 0.52
COLCA2-202ENST00000526216 MYH14Q7Z406 1995 aaKnown RBP18.29■□□□□ 0.52
COLCA2-202ENST00000526216 STARD3NLO95772 234 aa18.29■□□□□ 0.52
COLCA2-202ENST00000526216 INTS5Q6P9B9 1019 aaKnown RBP18.29■□□□□ 0.52
COLCA2-202ENST00000526216 ITPRIPQ8IWB1 547 aa18.29■□□□□ 0.52
COLCA2-202ENST00000526216 LINC00116Q8NCU8 138 aa18.29■□□□□ 0.52
COLCA2-202ENST00000526216 TAF1LQ8IZX4 1826 aa18.29■□□□□ 0.52
COLCA2-202ENST00000526216 ARFGEF2Q9Y6D5 1785 aa18.29■□□□□ 0.52
COLCA2-202ENST00000526216 PI4KAP2A4QPH2 592 aa18.28■□□□□ 0.52
COLCA2-202ENST00000526216 AIMP1Q12904 312 aaKnown RBP18.28■□□□□ 0.52
COLCA2-202ENST00000526216 TTLL7Q6ZT98 887 aa18.28■□□□□ 0.52
COLCA2-202ENST00000526216 PI4KAP1Q8N8J0 262 aa18.28■□□□□ 0.52
COLCA2-202ENST00000526216 PPP4R2Q9NY27 417 aa18.28■□□□□ 0.52
COLCA2-202ENST00000526216 EP400Q96L91 3159 aa18.28■□□□□ 0.52
COLCA2-202ENST00000526216 KSR2Q6VAB6 950 aa18.27■□□□□ 0.52
COLCA2-202ENST00000526216 ATP10DQ9P241 1426 aa18.27■□□□□ 0.52
COLCA2-202ENST00000526216 CRKLP46109 303 aaKnown RBP18.26■□□□□ 0.51
COLCA2-202ENST00000526216 SLC4A10Q6U841 1118 aa18.26■□□□□ 0.51
COLCA2-202ENST00000526216 DNAAF4Q8WXU2 420 aa18.26■□□□□ 0.51
COLCA2-202ENST00000526216 CCDC87Q9NVE4 849 aa18.26■□□□□ 0.51
COLCA2-202ENST00000526216 DDX19BQ9UMR2 479 aa18.26■□□□□ 0.51
COLCA2-202ENST00000526216 MAP3K2Q9Y2U5 619 aa18.26■□□□□ 0.51
COLCA2-202ENST00000526216 ZBTB7BO15156 539 aaPredicted RBP18.25■□□□□ 0.51
COLCA2-202ENST00000526216 CCNL1Q9UK58 526 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms