RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 ZPR1O75312 459 aa23.12■■□□□ 1.29
NR1H3-228ENST00000525441 PNISRQ8TF01 805 aaKnown RBP23.12■■□□□ 1.29
NR1H3-228ENST00000525441 GPR162Q16538 588 aa23.11■■□□□ 1.29
NR1H3-228ENST00000525441 SRP68Q9UHB9 627 aaKnown RBP23.11■■□□□ 1.29
NR1H3-228ENST00000525441 C4AP0C0L4 1744 aa23.11■■□□□ 1.29
NR1H3-228ENST00000525441 CANXP27824 592 aaKnown RBP23.1■■□□□ 1.29
NR1H3-228ENST00000525441 PARP3Q9Y6F1 533 aa23.1■■□□□ 1.29
NR1H3-228ENST00000525441 COL15A1P39059 1388 aa23.1■■□□□ 1.29
NR1H3-228ENST00000525441 A0A087WZG4 1122 aa23.09■■□□□ 1.29
NR1H3-228ENST00000525441 SNRPA1P09661 255 aaKnown RBP23.09■■□□□ 1.29
NR1H3-228ENST00000525441 LMOD3Q0VAK6 560 aa23.09■■□□□ 1.29
NR1H3-228ENST00000525441 DLG5Q8TDM6 1919 aa23.08■■□□□ 1.29
NR1H3-228ENST00000525441 RIPK4P57078 832 aa23.08■■□□□ 1.29
NR1H3-228ENST00000525441 NPM2Q86SE8 214 aaKnown RBP23.08■■□□□ 1.29
NR1H3-228ENST00000525441 PELP1Q8IZL8 1130 aaKnown RBP23.08■■□□□ 1.29
NR1H3-228ENST00000525441 NARFQ9UHQ1 456 aa23.08■■□□□ 1.29
NR1H3-228ENST00000525441 FKBP8Q14318 412 aa23.07■■□□□ 1.28
NR1H3-228ENST00000525441 RUNDC1Q96C34 613 aa23.07■■□□□ 1.28
NR1H3-228ENST00000525441 TMPOP42166 694 aaKnown RBP23.06■■□□□ 1.28
NR1H3-228ENST00000525441 EIF5P55010 431 aaKnown RBP23.06■■□□□ 1.28
NR1H3-228ENST00000525441 USPL1Q5W0Q7 1092 aa23.06■■□□□ 1.28
NR1H3-228ENST00000525441 CCDC146Q8IYE0 955 aa23.06■■□□□ 1.28
NR1H3-228ENST00000525441 ADAMTS8Q9UP79 889 aa23.06■■□□□ 1.28
NR1H3-228ENST00000525441 IL6STP40189 918 aaPredicted RBP23.05■■□□□ 1.28
NR1H3-228ENST00000525441 THUMPD2Q9BTF0 503 aaKnown RBP23.05■■□□□ 1.28
NR1H3-228ENST00000525441 YY1P25490 414 aa23.04■■□□□ 1.28
NR1H3-228ENST00000525441 MIS18AQ9NYP9 233 aa23.04■■□□□ 1.28
NR1H3-228ENST00000525441 A1BGP04217 495 aa23.03■■□□□ 1.28
NR1H3-228ENST00000525441 ZNF330Q9Y3S2 320 aaPredicted RBP23.03■■□□□ 1.28
NR1H3-228ENST00000525441 USP16Q9Y5T5 823 aa23.03■■□□□ 1.28
NR1H3-228ENST00000525441 GRIN3BO60391 1043 aa23.02■■□□□ 1.28
NR1H3-228ENST00000525441 C10orf71Q711Q0 1435 aa23■■□□□ 1.27
NR1H3-228ENST00000525441 PRAMEF22A3QJZ6 481 aa23■■□□□ 1.27
NR1H3-228ENST00000525441 ANP32CO43423 234 aa23■■□□□ 1.27
NR1H3-228ENST00000525441 TM4SF1P30408 202 aa23■■□□□ 1.27
NR1H3-228ENST00000525441 TGFB2P61812 414 aa23■■□□□ 1.27
NR1H3-228ENST00000525441 DDR1Q08345 913 aa23■■□□□ 1.27
NR1H3-228ENST00000525441 NEUROD2Q15784 382 aa23■■□□□ 1.27
NR1H3-228ENST00000525441 RRP7AQ9Y3A4 280 aaKnown RBP23■■□□□ 1.27
NR1H3-228ENST00000525441 EIF4A1P60842 406 aaKnown RBP22.99■■□□□ 1.27
NR1H3-228ENST00000525441 BABAM1Q9NWV8 329 aa22.99■■□□□ 1.27
NR1H3-228ENST00000525441 TSPYL4Q9UJ04 414 aa22.99■■□□□ 1.27
NR1H3-228ENST00000525441 POLRMTO00411 1230 aaKnown RBP22.98■■□□□ 1.27
NR1H3-228ENST00000525441 YBX3P16989 372 aaKnown RBP eCLIP22.98■■□□□ 1.27
NR1H3-228ENST00000525441 NFIXQ14938 502 aa22.98■■□□□ 1.27
NR1H3-228ENST00000525441 BCL2L12Q9HB09 334 aa22.98■■□□□ 1.27
NR1H3-228ENST00000525441 KDM3BQ7LBC6 1761 aa22.98■■□□□ 1.27
NR1H3-228ENST00000525441 TBC1D2BQ9UPU7 963 aa22.97■■□□□ 1.27
NR1H3-228ENST00000525441 GIGYF1O75420 1035 aaPredicted RBP22.96■■□□□ 1.27
NR1H3-228ENST00000525441 KIF13BQ9NQT8 1826 aa22.96■■□□□ 1.27
NR1H3-228ENST00000525441 PXDNLA1KZ92 1463 aa22.95■■□□□ 1.26
NR1H3-228ENST00000525441 DZIP3Q86Y13 1208 aaKnown RBP22.95■■□□□ 1.26
NR1H3-228ENST00000525441 PIP4K2AP48426 406 aaPredicted RBP22.94■■□□□ 1.26
NR1H3-228ENST00000525441 CAMTA2O94983 1202 aa22.93■■□□□ 1.26
NR1H3-228ENST00000525441 TRIM35Q9UPQ4 493 aa22.93■■□□□ 1.26
NR1H3-228ENST00000525441 CHD4Q14839 1912 aa22.92■■□□□ 1.26
NR1H3-228ENST00000525441 A0A0G2JLW4 131 aa22.92■■□□□ 1.26
NR1H3-228ENST00000525441 NBPF26B4DH59 902 aa22.92■■□□□ 1.26
NR1H3-228ENST00000525441 SERPINB2P05120 415 aa22.92■■□□□ 1.26
NR1H3-228ENST00000525441 DPEP1P16444 411 aa22.92■■□□□ 1.26
NR1H3-228ENST00000525441 NBPF10Q6P3W6 841 aaKnown RBP22.92■■□□□ 1.26
NR1H3-228ENST00000525441 BICDL1Q6ZP65 573 aa22.92■■□□□ 1.26
NR1H3-228ENST00000525441 NBPF15Q8N660 670 aa22.92■■□□□ 1.26
NR1H3-228ENST00000525441 SCN7AQ01118 1682 aa22.92■■□□□ 1.26
NR1H3-228ENST00000525441 LAMB4A4D0S4 1761 aa22.91■■□□□ 1.26
NR1H3-228ENST00000525441 TBC1D9BQ66K14 1250 aa22.91■■□□□ 1.26
NR1H3-228ENST00000525441 WWC3Q9ULE0 1092 aa22.91■■□□□ 1.26
NR1H3-228ENST00000525441 ZNF652Q9Y2D9 606 aa22.91■■□□□ 1.26
NR1H3-228ENST00000525441 APAF1O14727 1248 aa22.9■■□□□ 1.26
NR1H3-228ENST00000525441 MRS2Q9HD23 443 aa22.9■■□□□ 1.26
NR1H3-228ENST00000525441 RGL2O15211 777 aa22.89■■□□□ 1.25
NR1H3-228ENST00000525441 CCDC184Q52MB2 194 aa22.89■■□□□ 1.25
NR1H3-228ENST00000525441 CLEC4GQ6UXB4 293 aa22.89■■□□□ 1.25
NR1H3-228ENST00000525441 SETDB2Q96T68 719 aa22.89■■□□□ 1.25
NR1H3-228ENST00000525441 LAS1LQ9Y4W2 734 aaKnown RBP22.89■■□□□ 1.25
NR1H3-228ENST00000525441 CARMIL3Q8ND23 1372 aa22.89■■□□□ 1.25
NR1H3-228ENST00000525441 ERBB4Q15303 1308 aa22.88■■□□□ 1.25
NR1H3-228ENST00000525441 CHL1O00533 1208 aa22.88■■□□□ 1.25
NR1H3-228ENST00000525441 CALD1Q05682 793 aaKnown RBP22.87■■□□□ 1.25
NR1H3-228ENST00000525441 PIM2Q9P1W9 311 aa22.87■■□□□ 1.25
NR1H3-228ENST00000525441 BCS1LQ9Y276 419 aa22.87■■□□□ 1.25
NR1H3-228ENST00000525441 KIAA1551Q9HCM1 1747 aa22.87■■□□□ 1.25
NR1H3-228ENST00000525441 N4BP2Q86UW6 1770 aaPredicted RBP22.86■■□□□ 1.25
NR1H3-228ENST00000525441 NRXN2Q9P2S2 1712 aa22.85■■□□□ 1.25
NR1H3-228ENST00000525441 AFDNP55196 1824 aaKnown RBP22.85■■□□□ 1.25
NR1H3-228ENST00000525441 NPHP1O15259 732 aa22.85■■□□□ 1.25
NR1H3-228ENST00000525441 CFAP44Q96MT7 982 aa22.85■■□□□ 1.25
NR1H3-228ENST00000525441 BCORQ6W2J9 1755 aa22.85■■□□□ 1.25
NR1H3-228ENST00000525441 EIF2S2P20042 333 aaKnown RBP22.84■■□□□ 1.25
NR1H3-228ENST00000525441 KCNA3P22001 575 aa22.84■■□□□ 1.25
NR1H3-228ENST00000525441 KIF6Q6ZMV9 814 aa22.84■■□□□ 1.25
NR1H3-228ENST00000525441 NGEFQ8N5V2 710 aa22.84■■□□□ 1.25
NR1H3-228ENST00000525441 UTRNP46939 3433 aa22.83■■□□□ 1.25
NR1H3-228ENST00000525441 MYL6BP14649 208 aa22.83■■□□□ 1.25
NR1H3-228ENST00000525441 CHRNA5P30532 468 aa22.83■■□□□ 1.25
NR1H3-228ENST00000525441 DALRD3Q5D0E6 543 aaKnown RBP22.83■■□□□ 1.25
NR1H3-228ENST00000525441 CNBD1Q8NA66 436 aa22.83■■□□□ 1.25
NR1H3-228ENST00000525441 GOLGB1Q14789 3259 aaKnown RBP22.82■■□□□ 1.24
NR1H3-228ENST00000525441 ERVV-1B6SEH8 477 aa22.82■■□□□ 1.24
NR1H3-228ENST00000525441 PDZRN3Q9UPQ7 1066 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms