RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 ANKRD44Q8N8A2 993 aa27.94■■■□□ 2.06
NKX6-3-202ENST00000524115 WNK3Q9BYP7 1800 aa27.94■■■□□ 2.06
NKX6-3-202ENST00000524115 MCM10Q7L590 875 aa27.93■■■□□ 2.06
NKX6-3-202ENST00000524115 SIRT2Q8IXJ6 389 aa27.93■■■□□ 2.06
NKX6-3-202ENST00000524115 PSDA5PKW4 1024 aaPredicted RBP27.92■■■□□ 2.06
NKX6-3-202ENST00000524115 C1orf115Q9H7X2 142 aa27.91■■■□□ 2.06
NKX6-3-202ENST00000524115 PLSCR1O15162 318 aa27.91■■■□□ 2.06
NKX6-3-202ENST00000524115 USHBP1Q8N6Y0 703 aa27.91■■■□□ 2.06
NKX6-3-202ENST00000524115 KCNQ2O43526 872 aa27.9■■■□□ 2.06
NKX6-3-202ENST00000524115 MTHFSDQ2M296 383 aaKnown RBP27.9■■■□□ 2.06
NKX6-3-202ENST00000524115 DDX54Q8TDD1 881 aaKnown RBP27.9■■■□□ 2.06
NKX6-3-202ENST00000524115 CHMP5Q9NZZ3 219 aa27.9■■■□□ 2.06
NKX6-3-202ENST00000524115 CCT4P50991 539 aaKnown RBP27.89■■■□□ 2.06
NKX6-3-202ENST00000524115 TSPYL4Q9UJ04 414 aa27.89■■■□□ 2.06
NKX6-3-202ENST00000524115 CDC45O75419 566 aa27.88■■■□□ 2.05
NKX6-3-202ENST00000524115 R3HDM1Q15032 1099 aaKnown RBP27.88■■■□□ 2.05
NKX6-3-202ENST00000524115 ACSBG1Q96GR2 724 aa27.88■■■□□ 2.05
NKX6-3-202ENST00000524115 EYA1Q99502 592 aa27.88■■■□□ 2.05
NKX6-3-202ENST00000524115 SLKQ9H2G2 1235 aaPredicted RBP27.88■■■□□ 2.05
NKX6-3-202ENST00000524115 HMMRO75330 724 aa27.87■■■□□ 2.05
NKX6-3-202ENST00000524115 ZCRB1Q8TBF4 217 aaKnown RBP27.87■■■□□ 2.05
NKX6-3-202ENST00000524115 FAM208AQ9UK61 1670 aaKnown RBP27.85■■■□□ 2.05
NKX6-3-202ENST00000524115 RAPGEF4Q8WZA2 1011 aa27.84■■■□□ 2.05
NKX6-3-202ENST00000524115 CHMP4AQ9BY43 222 aa27.84■■■□□ 2.05
NKX6-3-202ENST00000524115 ATP10DQ9P241 1426 aa27.84■■■□□ 2.05
NKX6-3-202ENST00000524115 SLC4A2P04920 1241 aa27.84■■■□□ 2.05
NKX6-3-202ENST00000524115 STK31Q9BXU1 1019 aa27.84■■■□□ 2.05
NKX6-3-202ENST00000524115 MEGF6O75095 1541 aa27.84■■■□□ 2.05
NKX6-3-202ENST00000524115 GNAT3A8MTJ3 354 aa27.83■■■□□ 2.05
NKX6-3-202ENST00000524115 NBPF14Q5TI25 921 aa27.83■■■□□ 2.05
NKX6-3-202ENST00000524115 CEP85Q6P2H3 762 aa27.82■■■□□ 2.04
NKX6-3-202ENST00000524115 PROM2Q8N271 834 aa27.82■■■□□ 2.04
NKX6-3-202ENST00000524115 TATP17735 454 aaPredicted RBP27.81■■■□□ 2.04
NKX6-3-202ENST00000524115 CIZ1Q9ULV3 898 aaPredicted RBP27.81■■■□□ 2.04
NKX6-3-202ENST00000524115 CCDC30Q5VVM6 783 aa27.81■■■□□ 2.04
NKX6-3-202ENST00000524115 TBC1D9Q6ZT07 1266 aa27.81■■■□□ 2.04
NKX6-3-202ENST00000524115 PLEKHM2Q8IWE5 1019 aa27.8■■■□□ 2.04
NKX6-3-202ENST00000524115 KRT24Q2M2I5 525 aa27.78■■■□□ 2.04
NKX6-3-202ENST00000524115 TTC22Q5TAA0 569 aa27.78■■■□□ 2.04
NKX6-3-202ENST00000524115 CASC1Q6TDU7 716 aa27.78■■■□□ 2.04
NKX6-3-202ENST00000524115 MAP3K5Q99683 1374 aa27.78■■■□□ 2.04
NKX6-3-202ENST00000524115 SBF2Q86WG5 1849 aa27.78■■■□□ 2.04
NKX6-3-202ENST00000524115 TXNRD1Q16881 649 aa27.77■■■□□ 2.04
NKX6-3-202ENST00000524115 RGPD2P0DJD1 1756 aa27.75■■■□□ 2.03
NKX6-3-202ENST00000524115 GNAI3P08754 354 aa27.75■■■□□ 2.03
NKX6-3-202ENST00000524115 PTMSP20962 102 aa27.74■■■□□ 2.03
NKX6-3-202ENST00000524115 PRIM1P49642 420 aaKnown RBP27.74■■■□□ 2.03
NKX6-3-202ENST00000524115 RREB1Q92766 1687 aa27.73■■■□□ 2.03
NKX6-3-202ENST00000524115 TAF7Q15545 349 aaPredicted RBP27.73■■■□□ 2.03
NKX6-3-202ENST00000524115 PXDNLA1KZ92 1463 aa27.73■■■□□ 2.03
NKX6-3-202ENST00000524115 SYTL4Q96C24 671 aaPredicted RBP27.72■■■□□ 2.03
NKX6-3-202ENST00000524115 CACNA1FO60840 1977 aa27.72■■■□□ 2.03
NKX6-3-202ENST00000524115 NCAPD2Q15021 1401 aa27.72■■■□□ 2.03
NKX6-3-202ENST00000524115 GNAI2P04899 355 aa27.72■■■□□ 2.03
NKX6-3-202ENST00000524115 HSP90AB1P08238 724 aaKnown RBP27.72■■■□□ 2.03
NKX6-3-202ENST00000524115 MCM4P33991 863 aa27.72■■■□□ 2.03
NKX6-3-202ENST00000524115 MEIS3Q99687 375 aa27.72■■■□□ 2.03
NKX6-3-202ENST00000524115 ANO8Q9HCE9 1232 aaPredicted RBP27.72■■■□□ 2.03
NKX6-3-202ENST00000524115 PCDH11XQ9BZA7 1347 aa27.7■■■□□ 2.03
NKX6-3-202ENST00000524115 PCDH11YQ9BZA8 1340 aa27.7■■■□□ 2.03
NKX6-3-202ENST00000524115 DDX11L8A8MPP1 907 aa27.7■■■□□ 2.02
NKX6-3-202ENST00000524115 L1TD1Q5T7N2 865 aaKnown RBP27.7■■■□□ 2.02
NKX6-3-202ENST00000524115 NHSQ6T4R5 1651 aa27.7■■■□□ 2.02
NKX6-3-202ENST00000524115 GSPT1P15170 499 aaKnown RBP27.69■■■□□ 2.02
NKX6-3-202ENST00000524115 OSBPL3Q9H4L5 887 aa27.69■■■□□ 2.02
NKX6-3-202ENST00000524115 NUP188Q5SRE5 1749 aa27.69■■■□□ 2.02
NKX6-3-202ENST00000524115 CYP27B1O15528 508 aa27.68■■■□□ 2.02
NKX6-3-202ENST00000524115 DDIT3P35638 169 aa27.68■■■□□ 2.02
NKX6-3-202ENST00000524115 MIS18AQ9NYP9 233 aa27.68■■■□□ 2.02
NKX6-3-202ENST00000524115 RABEP1Q15276 862 aa27.68■■■□□ 2.02
NKX6-3-202ENST00000524115 RGPD3A6NKT7 1758 aaPredicted RBP27.67■■■□□ 2.02
NKX6-3-202ENST00000524115 RGPD4Q7Z3J3 1758 aa27.67■■■□□ 2.02
NKX6-3-202ENST00000524115 HOXB7P09629 217 aa27.67■■■□□ 2.02
NKX6-3-202ENST00000524115 FLIIQ13045 1269 aa27.67■■■□□ 2.02
NKX6-3-202ENST00000524115 KIF2CQ99661 725 aa27.67■■■□□ 2.02
NKX6-3-202ENST00000524115 K7ELQ4 463 aaPredicted RBP27.66■■■□□ 2.02
NKX6-3-202ENST00000524115 SPG7Q9UQ90 795 aa27.66■■■□□ 2.02
NKX6-3-202ENST00000524115 SLC4A10Q6U841 1118 aa27.65■■■□□ 2.02
NKX6-3-202ENST00000524115 N4BP2Q86UW6 1770 aaPredicted RBP27.65■■■□□ 2.02
NKX6-3-202ENST00000524115 G2E3Q7L622 706 aa27.65■■■□□ 2.02
NKX6-3-202ENST00000524115 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.65■■■□□ 2.02
NKX6-3-202ENST00000524115 REC8O95072 547 aa27.64■■■□□ 2.02
NKX6-3-202ENST00000524115 IL17REQ8NFR9 667 aa27.64■■■□□ 2.02
NKX6-3-202ENST00000524115 FKBP5Q13451 457 aaPredicted RBP27.63■■■□□ 2.01
NKX6-3-202ENST00000524115 STK32BQ9NY57 414 aa27.63■■■□□ 2.01
NKX6-3-202ENST00000524115 GBP4Q96PP9 640 aa27.62■■■□□ 2.01
NKX6-3-202ENST00000524115 LRRC4BQ9NT99 713 aa27.62■■■□□ 2.01
NKX6-3-202ENST00000524115 CEMIPQ8WUJ3 1361 aa27.62■■■□□ 2.01
NKX6-3-202ENST00000524115 SLC15A2Q16348 729 aa27.62■■■□□ 2.01
NKX6-3-202ENST00000524115 SPRYD3Q8NCJ5 442 aa27.62■■■□□ 2.01
NKX6-3-202ENST00000524115 HSP90AA1P07900 732 aaKnown RBP27.61■■■□□ 2.01
NKX6-3-202ENST00000524115 ATP8B2P98198 1209 aa27.61■■■□□ 2.01
NKX6-3-202ENST00000524115 SHANK3Q9BYB0 1731 aa27.61■■■□□ 2.01
NKX6-3-202ENST00000524115 SDSP20132 328 aa27.59■■■□□ 2.01
NKX6-3-202ENST00000524115 NKX1-1Q15270 411 aaPredicted RBP27.59■■■□□ 2.01
NKX6-3-202ENST00000524115 SLC27A3Q5K4L6 730 aa27.59■■■□□ 2.01
NKX6-3-202ENST00000524115 IL27Q8NEV9 243 aa27.59■■■□□ 2.01
NKX6-3-202ENST00000524115 USP26Q9BXU7 913 aa27.59■■■□□ 2.01
NKX6-3-202ENST00000524115 SRCIN1Q9C0H9 1055 aa27.59■■■□□ 2.01
NKX6-3-202ENST00000524115 F6X3S4 739 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms