RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 SMIM5Q71RC9 77 aa16.41■□□□□ 0.22
CCNC-216ENST00000523961 PTGER2P43116 358 aa16.4■□□□□ 0.22
CCNC-216ENST00000523961 PPP1R1BQ9UD71 204 aaPredicted RBP16.4■□□□□ 0.22
CCNC-216ENST00000523961 TSPYL4Q9UJ04 414 aa16.4■□□□□ 0.22
CCNC-216ENST00000523961 MYH14Q7Z406 1995 aaKnown RBP16.4■□□□□ 0.22
CCNC-216ENST00000523961 POLD1P28340 1107 aa16.39■□□□□ 0.21
CCNC-216ENST00000523961 FAM9BQ8IZU0 186 aa16.39■□□□□ 0.21
CCNC-216ENST00000523961 ARHGEF1Q92888 912 aaKnown RBP16.39■□□□□ 0.21
CCNC-216ENST00000523961 SGIP1Q9BQI5 828 aa16.39■□□□□ 0.21
CCNC-216ENST00000523961 RFC4P35249 363 aa16.38■□□□□ 0.21
CCNC-216ENST00000523961 EIF4A1P60842 406 aaKnown RBP16.38■□□□□ 0.21
CCNC-216ENST00000523961 CALD1Q05682 793 aaKnown RBP16.38■□□□□ 0.21
CCNC-216ENST00000523961 DIEXFQ68CQ4 756 aaKnown RBP16.38■□□□□ 0.21
CCNC-216ENST00000523961 ZBTB1Q9Y2K1 713 aa16.38■□□□□ 0.21
CCNC-216ENST00000523961 SOS1Q07889 1333 aaPredicted RBP16.38■□□□□ 0.21
CCNC-216ENST00000523961 KDM3BQ7LBC6 1761 aa16.37■□□□□ 0.21
CCNC-216ENST00000523961 CCER2I3L3R5 266 aa16.37■□□□□ 0.21
CCNC-216ENST00000523961 HOXD11P31277 338 aaPredicted RBP16.37■□□□□ 0.21
CCNC-216ENST00000523961 MSL1Q68DK7 614 aa16.37■□□□□ 0.21
CCNC-216ENST00000523961 USP16Q9Y5T5 823 aa16.37■□□□□ 0.21
CCNC-216ENST00000523961 CHL1O00533 1208 aa16.36■□□□□ 0.21
CCNC-216ENST00000523961 CANXP27824 592 aaKnown RBP16.36■□□□□ 0.21
CCNC-216ENST00000523961 NCBP3Q53F19 620 aaKnown RBP16.36■□□□□ 0.21
CCNC-216ENST00000523961 ARXQ96QS3 562 aa16.36■□□□□ 0.21
CCNC-216ENST00000523961 LAS1LQ9Y4W2 734 aaKnown RBP16.36■□□□□ 0.21
CCNC-216ENST00000523961 SRCAPQ6ZRS2 3230 aa16.35■□□□□ 0.21
CCNC-216ENST00000523961 PRAMEF22A3QJZ6 481 aa16.35■□□□□ 0.21
CCNC-216ENST00000523961 GIGYF1O75420 1035 aaPredicted RBP16.35■□□□□ 0.21
CCNC-216ENST00000523961 CCDC27Q2M243 656 aa16.35■□□□□ 0.21
CCNC-216ENST00000523961 CFAP44Q96MT7 982 aa16.35■□□□□ 0.21
CCNC-216ENST00000523961 COL24A1Q17RW2 1714 aa16.34■□□□□ 0.21
CCNC-216ENST00000523961 A1BGP04217 495 aa16.34■□□□□ 0.21
CCNC-216ENST00000523961 IL6STP40189 918 aaPredicted RBP16.34■□□□□ 0.21
CCNC-216ENST00000523961 EIF5P55010 431 aaKnown RBP16.34■□□□□ 0.21
CCNC-216ENST00000523961 NPM2Q86SE8 214 aaKnown RBP16.34■□□□□ 0.21
CCNC-216ENST00000523961 NLGN1Q8N2Q7 840 aa16.34■□□□□ 0.21
CCNC-216ENST00000523961 COL15A1P39059 1388 aa16.34■□□□□ 0.21
CCNC-216ENST00000523961 A0A087WZG4 1122 aa16.33■□□□□ 0.2
CCNC-216ENST00000523961 ZPR1O75312 459 aa16.33■□□□□ 0.2
CCNC-216ENST00000523961 IFT57Q9NWB7 429 aa16.33■□□□□ 0.2
CCNC-216ENST00000523961 USP42Q9H9J4 1324 aaKnown RBP16.33■□□□□ 0.2
CCNC-216ENST00000523961 GYS1P13807 737 aa16.32■□□□□ 0.2
CCNC-216ENST00000523961 GNAI1P63096 354 aa16.32■□□□□ 0.2
CCNC-216ENST00000523961 WWC1Q8IX03 1113 aa16.32■□□□□ 0.2
CCNC-216ENST00000523961 NGEFQ8N5V2 710 aa16.32■□□□□ 0.2
CCNC-216ENST00000523961 SRP68Q9UHB9 627 aaKnown RBP16.32■□□□□ 0.2
CCNC-216ENST00000523961 NARFQ9UHQ1 456 aa16.32■□□□□ 0.2
CCNC-216ENST00000523961 ZNF853P0CG23 659 aa16.31■□□□□ 0.2
CCNC-216ENST00000523961 ZNF330Q9Y3S2 320 aaPredicted RBP16.31■□□□□ 0.2
CCNC-216ENST00000523961 C4AP0C0L4 1744 aa16.31■□□□□ 0.2
CCNC-216ENST00000523961 SENP3-EIF4A1A0A087X0R7 540 aa16.3■□□□□ 0.2
CCNC-216ENST00000523961 MBIPQ9NS73 344 aa16.3■□□□□ 0.2
CCNC-216ENST00000523961 MMP10P09238 476 aa16.29■□□□□ 0.2
CCNC-216ENST00000523961 USPL1Q5W0Q7 1092 aa16.29■□□□□ 0.2
CCNC-216ENST00000523961 FHDC1Q9C0D6 1143 aaPredicted RBP16.29■□□□□ 0.2
CCNC-216ENST00000523961 LAMB4A4D0S4 1761 aa16.28■□□□□ 0.2
CCNC-216ENST00000523961 IL16Q14005 1332 aa16.28■□□□□ 0.2
CCNC-216ENST00000523961 ERBB4Q15303 1308 aa16.28■□□□□ 0.2
CCNC-216ENST00000523961 NBPF26B4DH59 902 aa16.28■□□□□ 0.2
CCNC-216ENST00000523961 PIP4K2AP48426 406 aaPredicted RBP16.28■□□□□ 0.2
CCNC-216ENST00000523961 FKBP8Q14318 412 aa16.28■□□□□ 0.2
CCNC-216ENST00000523961 NBPF10Q6P3W6 841 aaKnown RBP16.28■□□□□ 0.2
CCNC-216ENST00000523961 MIER1Q8N108 512 aa16.28■□□□□ 0.2
CCNC-216ENST00000523961 NBPF15Q8N660 670 aa16.28■□□□□ 0.2
CCNC-216ENST00000523961 SALL2Q9Y467 1007 aaPredicted RBP16.28■□□□□ 0.2
CCNC-216ENST00000523961 HOXB7P09629 217 aa16.27■□□□□ 0.2
CCNC-216ENST00000523961 EIF2S2P20042 333 aaKnown RBP16.27■□□□□ 0.2
CCNC-216ENST00000523961 DZIP3Q86Y13 1208 aaKnown RBP16.27■□□□□ 0.2
CCNC-216ENST00000523961 KLHL34Q8N239 644 aa16.27■□□□□ 0.2
CCNC-216ENST00000523961 SYT17Q9BSW7 474 aa16.27■□□□□ 0.2
CCNC-216ENST00000523961 RNF216Q9NWF9 866 aaPredicted RBP16.27■□□□□ 0.2
CCNC-216ENST00000523961 TBC1D2BQ9UPU7 963 aa16.27■□□□□ 0.2
CCNC-216ENST00000523961 KRT24Q2M2I5 525 aa16.26■□□□□ 0.19
CCNC-216ENST00000523961 WDR63Q8IWG1 891 aa16.26■□□□□ 0.19
CCNC-216ENST00000523961 PARP3Q9Y6F1 533 aa16.26■□□□□ 0.19
CCNC-216ENST00000523961 BCL2L12Q9HB09 334 aa16.25■□□□□ 0.19
CCNC-216ENST00000523961 CAMTA2O94983 1202 aa16.24■□□□□ 0.19
CCNC-216ENST00000523961 TM4SF1P30408 202 aa16.24■□□□□ 0.19
CCNC-216ENST00000523961 DUSP27Q5VZP5 1158 aa16.24■□□□□ 0.19
CCNC-216ENST00000523961 CD2APQ9Y5K6 639 aa16.24■□□□□ 0.19
CCNC-216ENST00000523961 RGL2O15211 777 aa16.23■□□□□ 0.19
CCNC-216ENST00000523961 MYL6BP14649 208 aa16.23■□□□□ 0.19
CCNC-216ENST00000523961 NFIXQ14938 502 aa16.23■□□□□ 0.19
CCNC-216ENST00000523961 DCAF8L1A6NGE4 600 aa16.22■□□□□ 0.19
CCNC-216ENST00000523961 DDR1Q08345 913 aa16.22■□□□□ 0.19
CCNC-216ENST00000523961 PDIA6Q15084 440 aa16.22■□□□□ 0.19
CCNC-216ENST00000523961 HDGFL1Q5TGJ6 251 aa16.22■□□□□ 0.19
CCNC-216ENST00000523961 CLEC4GQ6UXB4 293 aa16.22■□□□□ 0.19
CCNC-216ENST00000523961 NECTIN2Q92692 538 aa16.22■□□□□ 0.19
CCNC-216ENST00000523961 TSR2Q969E8 191 aaKnown RBP16.22■□□□□ 0.19
CCNC-216ENST00000523961 CHMP4AQ9BY43 222 aa16.22■□□□□ 0.19
CCNC-216ENST00000523961 ZNF652Q9Y2D9 606 aa16.22■□□□□ 0.19
CCNC-216ENST00000523961 SCN7AQ01118 1682 aa16.21■□□□□ 0.19
CCNC-216ENST00000523961 POLRMTO00411 1230 aaKnown RBP16.21■□□□□ 0.19
CCNC-216ENST00000523961 DDX21Q9NR30 783 aaKnown RBP eCLIP16.21■□□□□ 0.19
CCNC-216ENST00000523961 ERVV-1B6SEH8 477 aa16.2■□□□□ 0.18
CCNC-216ENST00000523961 ELL2O00472 640 aaPredicted RBP16.2■□□□□ 0.18
CCNC-216ENST00000523961 TBC1D9BQ66K14 1250 aa16.2■□□□□ 0.18
CCNC-216ENST00000523961 KIF6Q6ZMV9 814 aa16.2■□□□□ 0.18
CCNC-216ENST00000523961 BICDL1Q6ZP65 573 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms