RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 PTGER2P43116 358 aa16.43■□□□□ 0.22
VEGFA-225ENST00000523950 CCDC27Q2M243 656 aa16.43■□□□□ 0.22
VEGFA-225ENST00000523950 AMIGO3Q86WK7 504 aa16.43■□□□□ 0.22
VEGFA-225ENST00000523950 SGIP1Q9BQI5 828 aa16.43■□□□□ 0.22
VEGFA-225ENST00000523950 TSPYL4Q9UJ04 414 aa16.43■□□□□ 0.22
VEGFA-225ENST00000523950 ATF5Q9Y2D1 282 aaPredicted RBP16.43■□□□□ 0.22
VEGFA-225ENST00000523950 SOS1Q07889 1333 aaPredicted RBP16.43■□□□□ 0.22
VEGFA-225ENST00000523950 POLD1P28340 1107 aa16.42■□□□□ 0.22
VEGFA-225ENST00000523950 DIEXFQ68CQ4 756 aaKnown RBP16.42■□□□□ 0.22
VEGFA-225ENST00000523950 RFC4P35249 363 aa16.41■□□□□ 0.22
VEGFA-225ENST00000523950 EIF4A1P60842 406 aaKnown RBP16.41■□□□□ 0.22
VEGFA-225ENST00000523950 NGEFQ8N5V2 710 aa16.41■□□□□ 0.22
VEGFA-225ENST00000523950 ARHGEF1Q92888 912 aaKnown RBP16.41■□□□□ 0.22
VEGFA-225ENST00000523950 MIS18AQ9NYP9 233 aa16.41■□□□□ 0.22
VEGFA-225ENST00000523950 PPP1R1BQ9UD71 204 aaPredicted RBP16.41■□□□□ 0.22
VEGFA-225ENST00000523950 ZBTB1Q9Y2K1 713 aa16.41■□□□□ 0.22
VEGFA-225ENST00000523950 CHL1O00533 1208 aa16.4■□□□□ 0.22
VEGFA-225ENST00000523950 COL15A1P39059 1388 aa16.39■□□□□ 0.21
VEGFA-225ENST00000523950 A0A087WZG4 1122 aa16.39■□□□□ 0.21
VEGFA-225ENST00000523950 GIGYF1O75420 1035 aaPredicted RBP16.39■□□□□ 0.21
VEGFA-225ENST00000523950 IL6STP40189 918 aaPredicted RBP16.39■□□□□ 0.21
VEGFA-225ENST00000523950 FAM9BQ8IZU0 186 aa16.39■□□□□ 0.21
VEGFA-225ENST00000523950 CFAP44Q96MT7 982 aa16.39■□□□□ 0.21
VEGFA-225ENST00000523950 EIF5P55010 431 aaKnown RBP16.38■□□□□ 0.21
VEGFA-225ENST00000523950 SMIM5Q71RC9 77 aa16.38■□□□□ 0.21
VEGFA-225ENST00000523950 NLGN1Q8N2Q7 840 aa16.38■□□□□ 0.21
VEGFA-225ENST00000523950 ARXQ96QS3 562 aa16.38■□□□□ 0.21
VEGFA-225ENST00000523950 IFT57Q9NWB7 429 aa16.38■□□□□ 0.21
VEGFA-225ENST00000523950 USP16Q9Y5T5 823 aa16.38■□□□□ 0.21
VEGFA-225ENST00000523950 USP42Q9H9J4 1324 aaKnown RBP16.38■□□□□ 0.21
VEGFA-225ENST00000523950 CANXP27824 592 aaKnown RBP16.37■□□□□ 0.21
VEGFA-225ENST00000523950 GNAI1P63096 354 aa16.37■□□□□ 0.21
VEGFA-225ENST00000523950 NPM2Q86SE8 214 aaKnown RBP16.37■□□□□ 0.21
VEGFA-225ENST00000523950 ERBB4Q15303 1308 aa16.37■□□□□ 0.21
VEGFA-225ENST00000523950 SCN7AQ01118 1682 aa16.37■□□□□ 0.21
VEGFA-225ENST00000523950 ZNF853P0CG23 659 aa16.36■□□□□ 0.21
VEGFA-225ENST00000523950 GYS1P13807 737 aa16.36■□□□□ 0.21
VEGFA-225ENST00000523950 NARFQ9UHQ1 456 aa16.36■□□□□ 0.21
VEGFA-225ENST00000523950 PRAMEF22A3QJZ6 481 aa16.35■□□□□ 0.21
VEGFA-225ENST00000523950 ZPR1O75312 459 aa16.35■□□□□ 0.21
VEGFA-225ENST00000523950 MSL1Q68DK7 614 aa16.35■□□□□ 0.21
VEGFA-225ENST00000523950 WWC1Q8IX03 1113 aa16.35■□□□□ 0.21
VEGFA-225ENST00000523950 LAS1LQ9Y4W2 734 aaKnown RBP16.35■□□□□ 0.21
VEGFA-225ENST00000523950 IL16Q14005 1332 aa16.35■□□□□ 0.21
VEGFA-225ENST00000523950 BCORQ6W2J9 1755 aa16.34■□□□□ 0.21
VEGFA-225ENST00000523950 A1BGP04217 495 aa16.34■□□□□ 0.21
VEGFA-225ENST00000523950 HOXB7P09629 217 aa16.34■□□□□ 0.21
VEGFA-225ENST00000523950 RGL2O15211 777 aa16.33■□□□□ 0.2
VEGFA-225ENST00000523950 USPL1Q5W0Q7 1092 aa16.32■□□□□ 0.2
VEGFA-225ENST00000523950 WDR63Q8IWG1 891 aa16.32■□□□□ 0.2
VEGFA-225ENST00000523950 MBIPQ9NS73 344 aa16.32■□□□□ 0.2
VEGFA-225ENST00000523950 SRP68Q9UHB9 627 aaKnown RBP16.32■□□□□ 0.2
VEGFA-225ENST00000523950 MMP10P09238 476 aa16.31■□□□□ 0.2
VEGFA-225ENST00000523950 FHDC1Q9C0D6 1143 aaPredicted RBP16.31■□□□□ 0.2
VEGFA-225ENST00000523950 NBPF26B4DH59 902 aa16.3■□□□□ 0.2
VEGFA-225ENST00000523950 NBPF10Q6P3W6 841 aaKnown RBP16.3■□□□□ 0.2
VEGFA-225ENST00000523950 DZIP3Q86Y13 1208 aaKnown RBP16.3■□□□□ 0.2
VEGFA-225ENST00000523950 NBPF15Q8N660 670 aa16.3■□□□□ 0.2
VEGFA-225ENST00000523950 CHMP4AQ9BY43 222 aa16.3■□□□□ 0.2
VEGFA-225ENST00000523950 ZNF330Q9Y3S2 320 aaPredicted RBP16.3■□□□□ 0.2
VEGFA-225ENST00000523950 KIF13BQ9NQT8 1826 aa16.3■□□□□ 0.2
VEGFA-225ENST00000523950 FKBP8Q14318 412 aa16.29■□□□□ 0.2
VEGFA-225ENST00000523950 SYT17Q9BSW7 474 aa16.29■□□□□ 0.2
VEGFA-225ENST00000523950 CD2APQ9Y5K6 639 aa16.29■□□□□ 0.2
VEGFA-225ENST00000523950 PARP3Q9Y6F1 533 aa16.29■□□□□ 0.2
VEGFA-225ENST00000523950 MIER1Q8N108 512 aa16.28■□□□□ 0.2
VEGFA-225ENST00000523950 BCL2L12Q9HB09 334 aa16.28■□□□□ 0.2
VEGFA-225ENST00000523950 TBC1D2BQ9UPU7 963 aa16.28■□□□□ 0.2
VEGFA-225ENST00000523950 ZNF652Q9Y2D9 606 aa16.28■□□□□ 0.2
VEGFA-225ENST00000523950 NRXN2Q9P2S2 1712 aa16.28■□□□□ 0.2
VEGFA-225ENST00000523950 CAMTA2O94983 1202 aa16.27■□□□□ 0.2
VEGFA-225ENST00000523950 EIF2S2P20042 333 aaKnown RBP16.27■□□□□ 0.2
VEGFA-225ENST00000523950 TM4SF1P30408 202 aa16.27■□□□□ 0.2
VEGFA-225ENST00000523950 PIP4K2AP48426 406 aaPredicted RBP16.27■□□□□ 0.2
VEGFA-225ENST00000523950 DUSP27Q5VZP5 1158 aa16.27■□□□□ 0.2
VEGFA-225ENST00000523950 CLEC4GQ6UXB4 293 aa16.27■□□□□ 0.2
VEGFA-225ENST00000523950 KRT24Q2M2I5 525 aa16.26■□□□□ 0.19
VEGFA-225ENST00000523950 HDGFL1Q5TGJ6 251 aa16.26■□□□□ 0.19
VEGFA-225ENST00000523950 C10orf71Q711Q0 1435 aa16.26■□□□□ 0.19
VEGFA-225ENST00000523950 AFDNP55196 1824 aaKnown RBP16.26■□□□□ 0.19
VEGFA-225ENST00000523950 SRCAPQ6ZRS2 3230 aa16.25■□□□□ 0.19
VEGFA-225ENST00000523950 ZNF521Q96K83 1311 aa16.25■□□□□ 0.19
VEGFA-225ENST00000523950 ERVV-1B6SEH8 477 aa16.25■□□□□ 0.19
VEGFA-225ENST00000523950 POLRMTO00411 1230 aaKnown RBP16.25■□□□□ 0.19
VEGFA-225ENST00000523950 NFIXQ14938 502 aa16.25■□□□□ 0.19
VEGFA-225ENST00000523950 KIF6Q6ZMV9 814 aa16.25■□□□□ 0.19
VEGFA-225ENST00000523950 DDX21Q9NR30 783 aaKnown RBP eCLIP16.25■□□□□ 0.19
VEGFA-225ENST00000523950 SALL2Q9Y467 1007 aaPredicted RBP16.25■□□□□ 0.19
VEGFA-225ENST00000523950 SENP3-EIF4A1A0A087X0R7 540 aa16.24■□□□□ 0.19
VEGFA-225ENST00000523950 MYL6BP14649 208 aa16.24■□□□□ 0.19
VEGFA-225ENST00000523950 DDR1Q08345 913 aa16.24■□□□□ 0.19
VEGFA-225ENST00000523950 PDIA6Q15084 440 aa16.24■□□□□ 0.19
VEGFA-225ENST00000523950 LRP10Q7Z4F1 713 aa16.24■□□□□ 0.19
VEGFA-225ENST00000523950 KLHL34Q8N239 644 aa16.24■□□□□ 0.19
VEGFA-225ENST00000523950 MYH16Q9H6N6 1097 aa16.24■□□□□ 0.19
VEGFA-225ENST00000523950 DBF4Q9UBU7 674 aaPredicted RBP16.24■□□□□ 0.19
VEGFA-225ENST00000523950 CARMIL3Q8ND23 1372 aa16.24■□□□□ 0.19
VEGFA-225ENST00000523950 NUP98P52948 1817 aa16.24■□□□□ 0.19
VEGFA-225ENST00000523950 MAP3K15Q6ZN16 1313 aa16.23■□□□□ 0.19
VEGFA-225ENST00000523950 FANCIQ9NVI1 1328 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms