RNA–Protein interactions for RNA: ENST00000523543.1

CDK16-221, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2

Gene CDK16, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-221ENST00000523543 CCDC30Q5VVM6 783 aa14.41□□□□□ -0.1
CDK16-221ENST00000523543 LINC00116Q8NCU8 138 aa14.41□□□□□ -0.1
CDK16-221ENST00000523543 UPF1Q92900 1129 aaKnown RBP eCLIP14.41□□□□□ -0.1
CDK16-221ENST00000523543 LAMB4A4D0S4 1761 aa14.41□□□□□ -0.1
CDK16-221ENST00000523543 CNTNAP4Q9C0A0 1308 aa14.41□□□□□ -0.1
CDK16-221ENST00000523543 EIF2S2P20042 333 aaKnown RBP14.4□□□□□ -0.1
CDK16-221ENST00000523543 KCNQ4P56696 695 aa14.4□□□□□ -0.1
CDK16-221ENST00000523543 SSH1Q8WYL5 1049 aa14.4□□□□□ -0.1
CDK16-221ENST00000523543 RCAN3Q9UKA8 241 aa14.4□□□□□ -0.1
CDK16-221ENST00000523543 HMGB2P26583 209 aaKnown RBP14.39□□□□□ -0.11
CDK16-221ENST00000523543 CRKLP46109 303 aaKnown RBP14.39□□□□□ -0.11
CDK16-221ENST00000523543 BRPF1P55201 1214 aaPredicted RBP14.39□□□□□ -0.11
CDK16-221ENST00000523543 EN1Q05925 392 aaPredicted RBP14.39□□□□□ -0.11
CDK16-221ENST00000523543 PDIA6Q15084 440 aa14.39□□□□□ -0.11
CDK16-221ENST00000523543 RC3H1Q5TC82 1133 aaKnown RBP14.39□□□□□ -0.11
CDK16-221ENST00000523543 LRP10Q7Z4F1 713 aa14.39□□□□□ -0.11
CDK16-221ENST00000523543 NECTIN2Q92692 538 aa14.39□□□□□ -0.11
CDK16-221ENST00000523543 NBPF26B4DH59 902 aa14.38□□□□□ -0.11
CDK16-221ENST00000523543 A1BGP04217 495 aa14.38□□□□□ -0.11
CDK16-221ENST00000523543 CENPBP07199 599 aaPredicted RBP14.38□□□□□ -0.11
CDK16-221ENST00000523543 EZH2Q15910 746 aaKnown RBP14.38□□□□□ -0.11
CDK16-221ENST00000523543 NBPF14Q5TI25 921 aa14.38□□□□□ -0.11
CDK16-221ENST00000523543 NBPF10Q6P3W6 841 aaKnown RBP14.38□□□□□ -0.11
CDK16-221ENST00000523543 INTS5Q6P9B9 1019 aaKnown RBP14.38□□□□□ -0.11
CDK16-221ENST00000523543 DEFB132Q7Z7B7 95 aa14.38□□□□□ -0.11
CDK16-221ENST00000523543 NBPF15Q8N660 670 aa14.38□□□□□ -0.11
CDK16-221ENST00000523543 DDX21Q9NR30 783 aaKnown RBP eCLIP14.38□□□□□ -0.11
CDK16-221ENST00000523543 CCDC87Q9NVE4 849 aa14.38□□□□□ -0.11
CDK16-221ENST00000523543 CHPF2Q9P2E5 772 aa14.38□□□□□ -0.11
CDK16-221ENST00000523543 DBF4Q9UBU7 674 aaPredicted RBP14.38□□□□□ -0.11
CDK16-221ENST00000523543 COL5A3P25940 1745 aaPredicted RBP14.38□□□□□ -0.11
CDK16-221ENST00000523543 RREB1Q92766 1687 aa14.37□□□□□ -0.11
CDK16-221ENST00000523543 PROSER3Q2NL68 480 aa14.37□□□□□ -0.11
CDK16-221ENST00000523543 MRPL50Q8N5N7 158 aaKnown RBP14.37□□□□□ -0.11
CDK16-221ENST00000523543 STK31Q9BXU1 1019 aa14.37□□□□□ -0.11
CDK16-221ENST00000523543 SMC4Q9NTJ3 1288 aa14.37□□□□□ -0.11
CDK16-221ENST00000523543 ZBTB1Q9Y2K1 713 aa14.37□□□□□ -0.11
CDK16-221ENST00000523543 TCERG1O14776 1098 aaKnown RBP14.36□□□□□ -0.11
CDK16-221ENST00000523543 BCL2L13Q9BXK5 485 aa14.36□□□□□ -0.11
CDK16-221ENST00000523543 HYPKQ9NX55 129 aa14.36□□□□□ -0.11
CDK16-221ENST00000523543 BCAR3O75815 825 aa14.35□□□□□ -0.11
CDK16-221ENST00000523543 SLC4A2P04920 1241 aa14.35□□□□□ -0.11
CDK16-221ENST00000523543 IL6STP40189 918 aaPredicted RBP14.35□□□□□ -0.11
CDK16-221ENST00000523543 C4BP0C0L5 1744 aa14.35□□□□□ -0.11
CDK16-221ENST00000523543 ANXA1P04083 346 aa14.34□□□□□ -0.11
CDK16-221ENST00000523543 PIP4K2AP48426 406 aaPredicted RBP14.34□□□□□ -0.11
CDK16-221ENST00000523543 EIF5P55010 431 aaKnown RBP14.34□□□□□ -0.11
CDK16-221ENST00000523543 AKT1S1Q96B36 256 aa14.34□□□□□ -0.11
CDK16-221ENST00000523543 KIF16BQ96L93 1317 aa14.34□□□□□ -0.11
CDK16-221ENST00000523543 RPS6KA4O75676 772 aa14.33□□□□□ -0.12
CDK16-221ENST00000523543 MYL6BP14649 208 aa14.33□□□□□ -0.12
CDK16-221ENST00000523543 CANXP27824 592 aaKnown RBP14.33□□□□□ -0.12
CDK16-221ENST00000523543 FLIIQ13045 1269 aa14.33□□□□□ -0.12
CDK16-221ENST00000523543 G2E3Q7L622 706 aa14.33□□□□□ -0.12
CDK16-221ENST00000523543 TAF1LQ8IZX4 1826 aa14.33□□□□□ -0.12
CDK16-221ENST00000523543 RNF123Q5XPI4 1314 aa14.33□□□□□ -0.12
CDK16-221ENST00000523543 GNPATO15228 680 aa14.32□□□□□ -0.12
CDK16-221ENST00000523543 ZNF827Q17R98 1081 aa14.32□□□□□ -0.12
CDK16-221ENST00000523543 AK7Q96M32 723 aa14.32□□□□□ -0.12
CDK16-221ENST00000523543 ANO8Q9HCE9 1232 aaPredicted RBP14.32□□□□□ -0.12
CDK16-221ENST00000523543 MYH14Q7Z406 1995 aaKnown RBP14.32□□□□□ -0.12
CDK16-221ENST00000523543 PTPRCP08575 1304 aa14.32□□□□□ -0.12
CDK16-221ENST00000523543 AMIGO3Q86WK7 504 aa14.31□□□□□ -0.12
CDK16-221ENST00000523543 XAGE3Q8WTP9 111 aa14.31□□□□□ -0.12
CDK16-221ENST00000523543 PHAXQ9H814 394 aaKnown RBP14.31□□□□□ -0.12
CDK16-221ENST00000523543 RTCBQ9Y3I0 505 aaKnown RBP14.31□□□□□ -0.12
CDK16-221ENST00000523543 COL15A1P39059 1388 aa14.31□□□□□ -0.12
CDK16-221ENST00000523543 NUP188Q5SRE5 1749 aa14.3□□□□□ -0.12
CDK16-221ENST00000523543 ADRA2BP18089 450 aa14.3□□□□□ -0.12
CDK16-221ENST00000523543 SSFA2P28290 1259 aa14.3□□□□□ -0.12
CDK16-221ENST00000523543 COPS6Q7L5N1 327 aa14.3□□□□□ -0.12
CDK16-221ENST00000523543 ARHGAP45Q92619 1136 aa14.3□□□□□ -0.12
CDK16-221ENST00000523543 NOB1Q9ULX3 412 aaKnown RBP14.3□□□□□ -0.12
CDK16-221ENST00000523543 A0A087WZG4 1122 aa14.29□□□□□ -0.12
CDK16-221ENST00000523543 RRP1P56182 461 aaKnown RBP14.29□□□□□ -0.12
CDK16-221ENST00000523543 TTLL7Q6ZT98 887 aa14.29□□□□□ -0.12
CDK16-221ENST00000523543 ADCY9O60503 1353 aa14.29□□□□□ -0.12
CDK16-221ENST00000523543 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.28□□□□□ -0.12
CDK16-221ENST00000523543 IPO8O15397 1037 aaKnown RBP14.28□□□□□ -0.12
CDK16-221ENST00000523543 TRIM27P14373 513 aa14.28□□□□□ -0.12
CDK16-221ENST00000523543 FKBP5Q13451 457 aaPredicted RBP14.28□□□□□ -0.12
CDK16-221ENST00000523543 ATF7IPQ6VMQ6 1270 aa14.28□□□□□ -0.12
CDK16-221ENST00000523543 ZNF330Q9Y3S2 320 aaPredicted RBP14.28□□□□□ -0.12
CDK16-221ENST00000523543 MAP3K15Q6ZN16 1313 aa14.27□□□□□ -0.12
CDK16-221ENST00000523543 ERVV-1B6SEH8 477 aa14.27□□□□□ -0.13
CDK16-221ENST00000523543 RGL2O15211 777 aa14.27□□□□□ -0.13
CDK16-221ENST00000523543 DDX58O95786 925 aaKnown RBP14.27□□□□□ -0.13
CDK16-221ENST00000523543 AIMP1Q12904 312 aaKnown RBP14.27□□□□□ -0.13
CDK16-221ENST00000523543 SLC15A2Q16348 729 aa14.27□□□□□ -0.13
CDK16-221ENST00000523543 ZKSCAN2Q63HK3 967 aa14.27□□□□□ -0.13
CDK16-221ENST00000523543 KSR2Q6VAB6 950 aa14.27□□□□□ -0.13
CDK16-221ENST00000523543 KIF6Q6ZMV9 814 aa14.27□□□□□ -0.13
CDK16-221ENST00000523543 SMIM5Q71RC9 77 aa14.27□□□□□ -0.13
CDK16-221ENST00000523543 NPM2Q86SE8 214 aaKnown RBP14.27□□□□□ -0.13
CDK16-221ENST00000523543 DZIP3Q86Y13 1208 aaKnown RBP14.27□□□□□ -0.13
CDK16-221ENST00000523543 PLBD2Q8NHP8 589 aa14.27□□□□□ -0.13
CDK16-221ENST00000523543 FRAT1Q92837 279 aaPredicted RBP14.27□□□□□ -0.13
CDK16-221ENST00000523543 API5Q9BZZ5 524 aaKnown RBP14.27□□□□□ -0.13
CDK16-221ENST00000523543 STK32BQ9NY57 414 aa14.27□□□□□ -0.13
CDK16-221ENST00000523543 ABCC4O15439 1325 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms