RNA–Protein interactions for RNA: ENST00000521550.5

SPIDR-214, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,849 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-214ENST00000521550 BCL11BQ9C0K0 894 aaPredicted RBP17.52■□□□□ 0.4
SPIDR-214ENST00000521550 HMMRO75330 724 aa17.51■□□□□ 0.39
SPIDR-214ENST00000521550 SEC24BO95487 1268 aa17.51■□□□□ 0.39
SPIDR-214ENST00000521550 BMP2KLQ5H9B9 411 aa17.51■□□□□ 0.39
SPIDR-214ENST00000521550 RGPD3A6NKT7 1758 aaPredicted RBP17.51■□□□□ 0.39
SPIDR-214ENST00000521550 RGPD4Q7Z3J3 1758 aa17.51■□□□□ 0.39
SPIDR-214ENST00000521550 C1orf115Q9H7X2 142 aa17.51■□□□□ 0.39
SPIDR-214ENST00000521550 RGPD2P0DJD1 1756 aa17.5■□□□□ 0.39
SPIDR-214ENST00000521550 PLSCR1O15162 318 aa17.5■□□□□ 0.39
SPIDR-214ENST00000521550 KRT24Q2M2I5 525 aa17.5■□□□□ 0.39
SPIDR-214ENST00000521550 NBPF14Q5TI25 921 aa17.49■□□□□ 0.39
SPIDR-214ENST00000521550 ANKRD44Q8N8A2 993 aa17.49■□□□□ 0.39
SPIDR-214ENST00000521550 PTF1AQ7RTS3 328 aa17.49■□□□□ 0.39
SPIDR-214ENST00000521550 C22orf23Q9BZE7 217 aa17.49■□□□□ 0.39
SPIDR-214ENST00000521550 DCTPP1Q9H773 170 aa17.49■□□□□ 0.39
SPIDR-214ENST00000521550 MIS18AQ9NYP9 233 aa17.49■□□□□ 0.39
SPIDR-214ENST00000521550 LRP5O75197 1615 aa17.49■□□□□ 0.39
SPIDR-214ENST00000521550 SLC4A3P48751 1232 aa17.48■□□□□ 0.39
SPIDR-214ENST00000521550 AMOTQ4VCS5 1084 aa17.48■□□□□ 0.39
SPIDR-214ENST00000521550 PLEKHO1Q53GL0 409 aaPredicted RBP17.48■□□□□ 0.39
SPIDR-214ENST00000521550 MFAP1P55081 439 aaKnown RBP17.47■□□□□ 0.39
SPIDR-214ENST00000521550 NHSQ6T4R5 1651 aa17.46■□□□□ 0.39
SPIDR-214ENST00000521550 SIRT2Q8IXJ6 389 aa17.46■□□□□ 0.39
SPIDR-214ENST00000521550 IL17REQ8NFR9 667 aa17.45■□□□□ 0.38
SPIDR-214ENST00000521550 CACNA1FO60840 1977 aa17.45■□□□□ 0.38
SPIDR-214ENST00000521550 KCNQ2O43526 872 aa17.44■□□□□ 0.38
SPIDR-214ENST00000521550 GNAI3P08754 354 aa17.44■□□□□ 0.38
SPIDR-214ENST00000521550 SLC4A10Q6U841 1118 aa17.44■□□□□ 0.38
SPIDR-214ENST00000521550 ACSBG1Q96GR2 724 aa17.44■□□□□ 0.38
SPIDR-214ENST00000521550 HOXB7P09629 217 aa17.44■□□□□ 0.38
SPIDR-214ENST00000521550 AKAP4Q5JQC9 854 aa17.44■□□□□ 0.38
SPIDR-214ENST00000521550 FKBP5Q13451 457 aaPredicted RBP17.43■□□□□ 0.38
SPIDR-214ENST00000521550 C1orf141Q5JVX7 400 aa17.43■□□□□ 0.38
SPIDR-214ENST00000521550 CEP85Q6P2H3 762 aa17.43■□□□□ 0.38
SPIDR-214ENST00000521550 DDX54Q8TDD1 881 aaKnown RBP17.43■□□□□ 0.38
SPIDR-214ENST00000521550 GNAI2P04899 355 aa17.42■□□□□ 0.38
SPIDR-214ENST00000521550 TEFQ10587 303 aa17.42■□□□□ 0.38
SPIDR-214ENST00000521550 FLIIQ13045 1269 aa17.42■□□□□ 0.38
SPIDR-214ENST00000521550 NBPF6Q5VWK0 638 aa17.42■□□□□ 0.38
SPIDR-214ENST00000521550 NBPF4Q96M43 638 aa17.42■□□□□ 0.38
SPIDR-214ENST00000521550 NCAPD2Q15021 1401 aa17.42■□□□□ 0.38
SPIDR-214ENST00000521550 USHBP1Q8N6Y0 703 aa17.42■□□□□ 0.38
SPIDR-214ENST00000521550 BTAF1O14981 1849 aa17.41■□□□□ 0.38
SPIDR-214ENST00000521550 CEMIPQ8WUJ3 1361 aa17.41■□□□□ 0.38
SPIDR-214ENST00000521550 DEKP35659 375 aaKnown RBP17.41■□□□□ 0.38
SPIDR-214ENST00000521550 CASC1Q6TDU7 716 aa17.41■□□□□ 0.38
SPIDR-214ENST00000521550 PROM2Q8N271 834 aa17.41■□□□□ 0.38
SPIDR-214ENST00000521550 CDC45O75419 566 aa17.4■□□□□ 0.38
SPIDR-214ENST00000521550 TXNRD1Q16881 649 aa17.4■□□□□ 0.38
SPIDR-214ENST00000521550 HDGFL1Q5TGJ6 251 aa17.4■□□□□ 0.38
SPIDR-214ENST00000521550 ZNF530Q6P9A1 599 aaPredicted RBP17.4■□□□□ 0.38
SPIDR-214ENST00000521550 MEIS3Q99687 375 aa17.4■□□□□ 0.38
SPIDR-214ENST00000521550 ATP10DQ9P241 1426 aa17.4■□□□□ 0.38
SPIDR-214ENST00000521550 MEGF6O75095 1541 aa17.4■□□□□ 0.38
SPIDR-214ENST00000521550 SHANK3Q9BYB0 1731 aa17.4■□□□□ 0.38
SPIDR-214ENST00000521550 RBM25P49756 843 aaKnown RBP17.4■□□□□ 0.38
SPIDR-214ENST00000521550 NFKBIBQ15653 356 aa17.4■□□□□ 0.38
SPIDR-214ENST00000521550 ZCRB1Q8TBF4 217 aaKnown RBP17.4■□□□□ 0.38
SPIDR-214ENST00000521550 PXDNLA1KZ92 1463 aa17.39■□□□□ 0.37
SPIDR-214ENST00000521550 G2E3Q7L622 706 aa17.39■□□□□ 0.37
SPIDR-214ENST00000521550 HSCBQ8IWL3 235 aa17.39■□□□□ 0.37
SPIDR-214ENST00000521550 RAPGEF4Q8WZA2 1011 aa17.39■□□□□ 0.37
SPIDR-214ENST00000521550 ANO8Q9HCE9 1232 aaPredicted RBP17.37■□□□□ 0.37
SPIDR-214ENST00000521550 PLEKHM2Q8IWE5 1019 aa17.37■□□□□ 0.37
SPIDR-214ENST00000521550 TBC1D2Q9BYX2 928 aa17.37■□□□□ 0.37
SPIDR-214ENST00000521550 BTBD11A6QL63 1104 aa17.36■□□□□ 0.37
SPIDR-214ENST00000521550 F6X3S4 739 aa17.36■□□□□ 0.37
SPIDR-214ENST00000521550 TATP17735 454 aaPredicted RBP17.36■□□□□ 0.37
SPIDR-214ENST00000521550 DOT1LQ8TEK3 1739 aa17.36■□□□□ 0.37
SPIDR-214ENST00000521550 TTC22Q5TAA0 569 aa17.35■□□□□ 0.37
SPIDR-214ENST00000521550 SYTL4Q96C24 671 aaPredicted RBP17.35■□□□□ 0.37
SPIDR-214ENST00000521550 EIF4A1P60842 406 aaKnown RBP17.35■□□□□ 0.37
SPIDR-214ENST00000521550 HDAC5Q9UQL6 1122 aa17.35■□□□□ 0.37
SPIDR-214ENST00000521550 TBC1D9Q6ZT07 1266 aa17.34■□□□□ 0.37
SPIDR-214ENST00000521550 STK32BQ9NY57 414 aa17.34■□□□□ 0.37
SPIDR-214ENST00000521550 NECTIN2Q92692 538 aa17.33■□□□□ 0.37
SPIDR-214ENST00000521550 SNX21Q969T3 373 aa17.33■□□□□ 0.37
SPIDR-214ENST00000521550 RNMTO43148 476 aaKnown RBP17.33■□□□□ 0.36
SPIDR-214ENST00000521550 UBTFL1P0CB47 393 aaPredicted RBP17.33■□□□□ 0.36
SPIDR-214ENST00000521550 PRIM1P49642 420 aaKnown RBP17.33■□□□□ 0.36
SPIDR-214ENST00000521550 SPON1Q9HCB6 807 aa17.33■□□□□ 0.36
SPIDR-214ENST00000521550 ATP8B2P98198 1209 aa17.32■□□□□ 0.36
SPIDR-214ENST00000521550 SLC15A2Q16348 729 aa17.32■□□□□ 0.36
SPIDR-214ENST00000521550 SRCIN1Q9C0H9 1055 aa17.32■□□□□ 0.36
SPIDR-214ENST00000521550 LGR6Q9HBX8 967 aa17.32■□□□□ 0.36
SPIDR-214ENST00000521550 CASZ1Q86V15 1759 aa17.32■□□□□ 0.36
SPIDR-214ENST00000521550 PCDH11XQ9BZA7 1347 aa17.32■□□□□ 0.36
SPIDR-214ENST00000521550 PCDH11YQ9BZA8 1340 aa17.32■□□□□ 0.36
SPIDR-214ENST00000521550 PLEKHG2Q9H7P9 1386 aa17.32■□□□□ 0.36
SPIDR-214ENST00000521550 EIF2S2P20042 333 aaKnown RBP17.31■□□□□ 0.36
SPIDR-214ENST00000521550 KDM3BQ7LBC6 1761 aa17.31■□□□□ 0.36
SPIDR-214ENST00000521550 N4BP2Q86UW6 1770 aaPredicted RBP17.31■□□□□ 0.36
SPIDR-214ENST00000521550 MPRIPQ6WCQ1 1025 aa17.31■□□□□ 0.36
SPIDR-214ENST00000521550 LRRCC1Q9C099 1032 aa17.31■□□□□ 0.36
SPIDR-214ENST00000521550 SLKQ9H2G2 1235 aaPredicted RBP17.31■□□□□ 0.36
SPIDR-214ENST00000521550 DBF4Q9UBU7 674 aaPredicted RBP17.31■□□□□ 0.36
SPIDR-214ENST00000521550 OSBPL3Q9H4L5 887 aa17.3■□□□□ 0.36
SPIDR-214ENST00000521550 SPG7Q9UQ90 795 aa17.3■□□□□ 0.36
SPIDR-214ENST00000521550 PKD1L3Q7Z443 1732 aa17.29■□□□□ 0.36
SPIDR-214ENST00000521550 APBB1O00213 710 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms