RNA–Protein interactions for RNA: ENST00000521368.5

CTNNA1-226, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-226ENST00000521368 ADRA2BP18089 450 aa17.97■□□□□ 0.47
CTNNA1-226ENST00000521368 INTS5Q6P9B9 1019 aaKnown RBP17.97■□□□□ 0.47
CTNNA1-226ENST00000521368 WDR63Q8IWG1 891 aa17.97■□□□□ 0.47
CTNNA1-226ENST00000521368 SLC16A10Q8TF71 515 aa17.97■□□□□ 0.47
CTNNA1-226ENST00000521368 RTCBQ9Y3I0 505 aaKnown RBP17.97■□□□□ 0.47
CTNNA1-226ENST00000521368 LAS1LQ9Y4W2 734 aaKnown RBP17.96■□□□□ 0.47
CTNNA1-226ENST00000521368 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.95■□□□□ 0.46
CTNNA1-226ENST00000521368 AMIGO3Q86WK7 504 aa17.95■□□□□ 0.46
CTNNA1-226ENST00000521368 COL23A1Q86Y22 540 aaPredicted RBP17.95■□□□□ 0.46
CTNNA1-226ENST00000521368 MBIPQ9NS73 344 aa17.95■□□□□ 0.46
CTNNA1-226ENST00000521368 LRP5O75197 1615 aa17.94■□□□□ 0.46
CTNNA1-226ENST00000521368 SENP3-EIF4A1A0A087X0R7 540 aa17.94■□□□□ 0.46
CTNNA1-226ENST00000521368 PDGFDQ9GZP0 370 aaPredicted RBP17.94■□□□□ 0.46
CTNNA1-226ENST00000521368 USP16Q9Y5T5 823 aa17.94■□□□□ 0.46
CTNNA1-226ENST00000521368 C4AP0C0L4 1744 aa17.94■□□□□ 0.46
CTNNA1-226ENST00000521368 COL24A1Q17RW2 1714 aa17.94■□□□□ 0.46
CTNNA1-226ENST00000521368 SOS1Q07889 1333 aaPredicted RBP17.94■□□□□ 0.46
CTNNA1-226ENST00000521368 ZNF521Q96K83 1311 aa17.94■□□□□ 0.46
CTNNA1-226ENST00000521368 PRAMEF22A3QJZ6 481 aa17.93■□□□□ 0.46
CTNNA1-226ENST00000521368 MTFR1LQ9H019 292 aa17.93■□□□□ 0.46
CTNNA1-226ENST00000521368 ZBTB1Q9Y2K1 713 aa17.93■□□□□ 0.46
CTNNA1-226ENST00000521368 SALL2Q9Y467 1007 aaPredicted RBP17.93■□□□□ 0.46
CTNNA1-226ENST00000521368 PHF14O94880 888 aa17.92■□□□□ 0.46
CTNNA1-226ENST00000521368 HOXB7P09629 217 aa17.92■□□□□ 0.46
CTNNA1-226ENST00000521368 TRAPPC3LQ5T215 181 aa17.92■□□□□ 0.46
CTNNA1-226ENST00000521368 IL6STP40189 918 aaPredicted RBP17.91■□□□□ 0.46
CTNNA1-226ENST00000521368 COL15A1P39059 1388 aa17.91■□□□□ 0.46
CTNNA1-226ENST00000521368 MSH5O43196 834 aa17.9■□□□□ 0.46
CTNNA1-226ENST00000521368 A1BGP04217 495 aa17.9■□□□□ 0.46
CTNNA1-226ENST00000521368 EIF5P55010 431 aaKnown RBP17.9■□□□□ 0.46
CTNNA1-226ENST00000521368 ARHGEF1Q92888 912 aaKnown RBP17.9■□□□□ 0.46
CTNNA1-226ENST00000521368 SPON1Q9HCB6 807 aa17.9■□□□□ 0.46
CTNNA1-226ENST00000521368 ERBB4Q15303 1308 aa17.9■□□□□ 0.46
CTNNA1-226ENST00000521368 CANXP27824 592 aaKnown RBP17.89■□□□□ 0.45
CTNNA1-226ENST00000521368 SMIM5Q71RC9 77 aa17.89■□□□□ 0.45
CTNNA1-226ENST00000521368 ZBTB7AO95365 584 aa17.88■□□□□ 0.45
CTNNA1-226ENST00000521368 RFC4P35249 363 aa17.88■□□□□ 0.45
CTNNA1-226ENST00000521368 A0A087WZG4 1122 aa17.87■□□□□ 0.45
CTNNA1-226ENST00000521368 KRT24Q2M2I5 525 aa17.87■□□□□ 0.45
CTNNA1-226ENST00000521368 USP42Q9H9J4 1324 aaKnown RBP17.87■□□□□ 0.45
CTNNA1-226ENST00000521368 FANCIQ9NVI1 1328 aa17.87■□□□□ 0.45
CTNNA1-226ENST00000521368 SCN7AQ01118 1682 aa17.87■□□□□ 0.45
CTNNA1-226ENST00000521368 NBPF26B4DH59 902 aa17.86■□□□□ 0.45
CTNNA1-226ENST00000521368 DUSP27Q5VZP5 1158 aa17.86■□□□□ 0.45
CTNNA1-226ENST00000521368 NBPF10Q6P3W6 841 aaKnown RBP17.86■□□□□ 0.45
CTNNA1-226ENST00000521368 NBPF15Q8N660 670 aa17.86■□□□□ 0.45
CTNNA1-226ENST00000521368 TSR2Q969E8 191 aaKnown RBP17.86■□□□□ 0.45
CTNNA1-226ENST00000521368 SGIP1Q9BQI5 828 aa17.86■□□□□ 0.45
CTNNA1-226ENST00000521368 CHMP4AQ9BY43 222 aa17.86■□□□□ 0.45
CTNNA1-226ENST00000521368 MYH16Q9H6N6 1097 aa17.86■□□□□ 0.45
CTNNA1-226ENST00000521368 GOLGA2Q08379 1002 aa17.85■□□□□ 0.45
CTNNA1-226ENST00000521368 NPM2Q86SE8 214 aaKnown RBP17.85■□□□□ 0.45
CTNNA1-226ENST00000521368 NARFQ9UHQ1 456 aa17.85■□□□□ 0.45
CTNNA1-226ENST00000521368 ATF5Q9Y2D1 282 aaPredicted RBP17.85■□□□□ 0.45
CTNNA1-226ENST00000521368 BCORQ6W2J9 1755 aa17.84■□□□□ 0.45
CTNNA1-226ENST00000521368 ZPR1O75312 459 aa17.84■□□□□ 0.45
CTNNA1-226ENST00000521368 GYS1P13807 737 aa17.84■□□□□ 0.45
CTNNA1-226ENST00000521368 PTGER2P43116 358 aa17.84■□□□□ 0.45
CTNNA1-226ENST00000521368 C8orf58Q8NAV2 365 aa17.84■□□□□ 0.45
CTNNA1-226ENST00000521368 SPINK5Q9NQ38 1064 aaPredicted RBP17.84■□□□□ 0.45
CTNNA1-226ENST00000521368 E9PSI1 815 aa17.83■□□□□ 0.44
CTNNA1-226ENST00000521368 EIF2S2P20042 333 aaKnown RBP17.83■□□□□ 0.44
CTNNA1-226ENST00000521368 HDGFL1Q5TGJ6 251 aa17.83■□□□□ 0.44
CTNNA1-226ENST00000521368 NLGN1Q8N2Q7 840 aa17.83■□□□□ 0.44
CTNNA1-226ENST00000521368 RGL2O15211 777 aa17.82■□□□□ 0.44
CTNNA1-226ENST00000521368 POLD1P28340 1107 aa17.82■□□□□ 0.44
CTNNA1-226ENST00000521368 PIP4K2AP48426 406 aaPredicted RBP17.82■□□□□ 0.44
CTNNA1-226ENST00000521368 PDIA6Q15084 440 aa17.82■□□□□ 0.44
CTNNA1-226ENST00000521368 ZNF330Q9Y3S2 320 aaPredicted RBP17.82■□□□□ 0.44
CTNNA1-226ENST00000521368 SRCAPQ6ZRS2 3230 aa17.81■□□□□ 0.44
CTNNA1-226ENST00000521368 USPL1Q5W0Q7 1092 aa17.81■□□□□ 0.44
CTNNA1-226ENST00000521368 MSL1Q68DK7 614 aa17.81■□□□□ 0.44
CTNNA1-226ENST00000521368 LRP10Q7Z4F1 713 aa17.81■□□□□ 0.44
CTNNA1-226ENST00000521368 DZIP3Q86Y13 1208 aaKnown RBP17.81■□□□□ 0.44
CTNNA1-226ENST00000521368 TSPYL6Q8N831 410 aa17.81■□□□□ 0.44
CTNNA1-226ENST00000521368 DDX21Q9NR30 783 aaKnown RBP eCLIP17.81■□□□□ 0.44
CTNNA1-226ENST00000521368 DBF4Q9UBU7 674 aaPredicted RBP17.81■□□□□ 0.44
CTNNA1-226ENST00000521368 SRP68Q9UHB9 627 aaKnown RBP17.81■□□□□ 0.44
CTNNA1-226ENST00000521368 ELL2O00472 640 aaPredicted RBP17.8■□□□□ 0.44
CTNNA1-226ENST00000521368 HNRNPUQ00839 825 aaKnown RBP eCLIP17.8■□□□□ 0.44
CTNNA1-226ENST00000521368 SLFN5Q08AF3 891 aa17.8■□□□□ 0.44
CTNNA1-226ENST00000521368 TWISTNBQ3B726 338 aaPredicted RBP17.8■□□□□ 0.44
CTNNA1-226ENST00000521368 CAMTA2O94983 1202 aa17.79■□□□□ 0.44
CTNNA1-226ENST00000521368 MYL6BP14649 208 aa17.79■□□□□ 0.44
CTNNA1-226ENST00000521368 EXOSC9Q06265 439 aaKnown RBP17.79■□□□□ 0.44
CTNNA1-226ENST00000521368 CCDC30Q5VVM6 783 aa17.79■□□□□ 0.44
CTNNA1-226ENST00000521368 NECTIN2Q92692 538 aa17.79■□□□□ 0.44
CTNNA1-226ENST00000521368 BCL2L12Q9HB09 334 aa17.79■□□□□ 0.44
CTNNA1-226ENST00000521368 CHPF2Q9P2E5 772 aa17.79■□□□□ 0.44
CTNNA1-226ENST00000521368 TBC1D2BQ9UPU7 963 aa17.79■□□□□ 0.44
CTNNA1-226ENST00000521368 FKBP8Q14318 412 aa17.78■□□□□ 0.44
CTNNA1-226ENST00000521368 PROSER3Q2NL68 480 aa17.78■□□□□ 0.44
CTNNA1-226ENST00000521368 CLEC4GQ6UXB4 293 aa17.78■□□□□ 0.44
CTNNA1-226ENST00000521368 TRMT2AQ8IZ69 625 aaKnown RBP17.78■□□□□ 0.44
CTNNA1-226ENST00000521368 ARXQ96QS3 562 aa17.78■□□□□ 0.44
CTNNA1-226ENST00000521368 ERVV-1B6SEH8 477 aa17.77■□□□□ 0.44
CTNNA1-226ENST00000521368 HYPKQ9NX55 129 aa17.77■□□□□ 0.44
CTNNA1-226ENST00000521368 ZBED9Q6R2W3 1325 aa17.76■□□□□ 0.43
CTNNA1-226ENST00000521368 VAMP4O75379 141 aa17.76■□□□□ 0.43
CTNNA1-226ENST00000521368 MMP10P09238 476 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms