RNA–Protein interactions for RNA: ENST00000520895.5

HDAC2-209, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-209ENST00000520895 BABAM1Q9NWV8 329 aa20.19■□□□□ 0.82
HDAC2-209ENST00000520895 ATF5Q9Y2D1 282 aaPredicted RBP20.19■□□□□ 0.82
HDAC2-209ENST00000520895 RPS6KA4O75676 772 aa20.18■□□□□ 0.82
HDAC2-209ENST00000520895 SNRPA1P09661 255 aaKnown RBP20.18■□□□□ 0.82
HDAC2-209ENST00000520895 TRAPPC3LQ5T215 181 aa20.18■□□□□ 0.82
HDAC2-209ENST00000520895 INTS5Q6P9B9 1019 aaKnown RBP20.18■□□□□ 0.82
HDAC2-209ENST00000520895 ADRA2BP18089 450 aa20.17■□□□□ 0.82
HDAC2-209ENST00000520895 MIER1Q8N108 512 aa20.16■□□□□ 0.82
HDAC2-209ENST00000520895 CANXP27824 592 aaKnown RBP20.15■□□□□ 0.82
HDAC2-209ENST00000520895 EIF4A1P60842 406 aaKnown RBP20.15■□□□□ 0.82
HDAC2-209ENST00000520895 PRAMEF22A3QJZ6 481 aa20.14■□□□□ 0.81
HDAC2-209ENST00000520895 RFC4P35249 363 aa20.14■□□□□ 0.81
HDAC2-209ENST00000520895 CCDC27Q2M243 656 aa20.14■□□□□ 0.81
HDAC2-209ENST00000520895 ARHGEF1Q92888 912 aaKnown RBP20.14■□□□□ 0.81
HDAC2-209ENST00000520895 PPP1R1BQ9UD71 204 aaPredicted RBP20.14■□□□□ 0.81
HDAC2-209ENST00000520895 ZBTB1Q9Y2K1 713 aa20.14■□□□□ 0.81
HDAC2-209ENST00000520895 SALL2Q9Y467 1007 aaPredicted RBP20.14■□□□□ 0.81
HDAC2-209ENST00000520895 USP16Q9Y5T5 823 aa20.14■□□□□ 0.81
HDAC2-209ENST00000520895 LAMB4A4D0S4 1761 aa20.13■□□□□ 0.81
HDAC2-209ENST00000520895 CHL1O00533 1208 aa20.13■□□□□ 0.81
HDAC2-209ENST00000520895 PTGER2P43116 358 aa20.13■□□□□ 0.81
HDAC2-209ENST00000520895 NCBP3Q53F19 620 aaKnown RBP20.13■□□□□ 0.81
HDAC2-209ENST00000520895 CFAP44Q96MT7 982 aa20.13■□□□□ 0.81
HDAC2-209ENST00000520895 SGIP1Q9BQI5 828 aa20.13■□□□□ 0.81
HDAC2-209ENST00000520895 C4AP0C0L4 1744 aa20.13■□□□□ 0.81
HDAC2-209ENST00000520895 SOS1Q07889 1333 aaPredicted RBP20.12■□□□□ 0.81
HDAC2-209ENST00000520895 GIGYF1O75420 1035 aaPredicted RBP20.12■□□□□ 0.81
HDAC2-209ENST00000520895 A1BGP04217 495 aa20.12■□□□□ 0.81
HDAC2-209ENST00000520895 POLD1P28340 1107 aa20.12■□□□□ 0.81
HDAC2-209ENST00000520895 GNAI1P63096 354 aa20.12■□□□□ 0.81
HDAC2-209ENST00000520895 MSL1Q68DK7 614 aa20.12■□□□□ 0.81
HDAC2-209ENST00000520895 NPM2Q86SE8 214 aaKnown RBP20.12■□□□□ 0.81
HDAC2-209ENST00000520895 WWC1Q8IX03 1113 aa20.12■□□□□ 0.81
HDAC2-209ENST00000520895 IFT57Q9NWB7 429 aa20.12■□□□□ 0.81
HDAC2-209ENST00000520895 ZNF330Q9Y3S2 320 aaPredicted RBP20.11■□□□□ 0.81
HDAC2-209ENST00000520895 COL15A1P39059 1388 aa20.09■□□□□ 0.81
HDAC2-209ENST00000520895 NGEFQ8N5V2 710 aa20.09■□□□□ 0.81
HDAC2-209ENST00000520895 A0A087WZG4 1122 aa20.08■□□□□ 0.81
HDAC2-209ENST00000520895 ZPR1O75312 459 aa20.08■□□□□ 0.81
HDAC2-209ENST00000520895 ZNF853P0CG23 659 aa20.08■□□□□ 0.81
HDAC2-209ENST00000520895 IL6STP40189 918 aaPredicted RBP20.08■□□□□ 0.81
HDAC2-209ENST00000520895 MBIPQ9NS73 344 aa20.08■□□□□ 0.81
HDAC2-209ENST00000520895 PIP4K2AP48426 406 aaPredicted RBP20.07■□□□□ 0.8
HDAC2-209ENST00000520895 EIF5P55010 431 aaKnown RBP20.07■□□□□ 0.8
HDAC2-209ENST00000520895 ARXQ96QS3 562 aa20.07■□□□□ 0.8
HDAC2-209ENST00000520895 USP42Q9H9J4 1324 aaKnown RBP20.06■□□□□ 0.8
HDAC2-209ENST00000520895 NLGN1Q8N2Q7 840 aa20.06■□□□□ 0.8
HDAC2-209ENST00000520895 SRP68Q9UHB9 627 aaKnown RBP20.06■□□□□ 0.8
HDAC2-209ENST00000520895 IL16Q14005 1332 aa20.05■□□□□ 0.8
HDAC2-209ENST00000520895 GYS1P13807 737 aa20.05■□□□□ 0.8
HDAC2-209ENST00000520895 EIF2S2P20042 333 aaKnown RBP20.05■□□□□ 0.8
HDAC2-209ENST00000520895 KRT24Q2M2I5 525 aa20.04■□□□□ 0.8
HDAC2-209ENST00000520895 USPL1Q5W0Q7 1092 aa20.04■□□□□ 0.8
HDAC2-209ENST00000520895 WDR63Q8IWG1 891 aa20.04■□□□□ 0.8
HDAC2-209ENST00000520895 NARFQ9UHQ1 456 aa20.04■□□□□ 0.8
HDAC2-209ENST00000520895 NBPF26B4DH59 902 aa20.03■□□□□ 0.8
HDAC2-209ENST00000520895 NBPF10Q6P3W6 841 aaKnown RBP20.03■□□□□ 0.8
HDAC2-209ENST00000520895 NBPF15Q8N660 670 aa20.03■□□□□ 0.8
HDAC2-209ENST00000520895 TBC1D2BQ9UPU7 963 aa20.03■□□□□ 0.8
HDAC2-209ENST00000520895 KLHL34Q8N239 644 aa20.02■□□□□ 0.8
HDAC2-209ENST00000520895 ERBB4Q15303 1308 aa20.02■□□□□ 0.79
HDAC2-209ENST00000520895 MMP10P09238 476 aa20.01■□□□□ 0.79
HDAC2-209ENST00000520895 HOXB7P09629 217 aa20.01■□□□□ 0.79
HDAC2-209ENST00000520895 MYL6BP14649 208 aa20.01■□□□□ 0.79
HDAC2-209ENST00000520895 FKBP8Q14318 412 aa20.01■□□□□ 0.79
HDAC2-209ENST00000520895 DUSP27Q5VZP5 1158 aa20.01■□□□□ 0.79
HDAC2-209ENST00000520895 DZIP3Q86Y13 1208 aaKnown RBP20.01■□□□□ 0.79
HDAC2-209ENST00000520895 NECTIN2Q92692 538 aa20.01■□□□□ 0.79
HDAC2-209ENST00000520895 TSR2Q969E8 191 aaKnown RBP20.01■□□□□ 0.79
HDAC2-209ENST00000520895 ELL2O00472 640 aaPredicted RBP19.99■□□□□ 0.79
HDAC2-209ENST00000520895 HDGFL1Q5TGJ6 251 aa19.99■□□□□ 0.79
HDAC2-209ENST00000520895 SCN7AQ01118 1682 aa19.99■□□□□ 0.79
HDAC2-209ENST00000520895 FHDC1Q9C0D6 1143 aaPredicted RBP19.98■□□□□ 0.79
HDAC2-209ENST00000520895 PARP3Q9Y6F1 533 aa19.98■□□□□ 0.79
HDAC2-209ENST00000520895 GOLGA2Q08379 1002 aa19.97■□□□□ 0.79
HDAC2-209ENST00000520895 C8orf58Q8NAV2 365 aa19.97■□□□□ 0.79
HDAC2-209ENST00000520895 MYH16Q9H6N6 1097 aa19.97■□□□□ 0.79
HDAC2-209ENST00000520895 BCL2L12Q9HB09 334 aa19.97■□□□□ 0.79
HDAC2-209ENST00000520895 BCORQ6W2J9 1755 aa19.97■□□□□ 0.79
HDAC2-209ENST00000520895 GOLGB1Q14789 3259 aaKnown RBP19.97■□□□□ 0.79
HDAC2-209ENST00000520895 FANCIQ9NVI1 1328 aa19.97■□□□□ 0.79
HDAC2-209ENST00000520895 CAMTA2O94983 1202 aa19.96■□□□□ 0.79
HDAC2-209ENST00000520895 KIF6Q6ZMV9 814 aa19.96■□□□□ 0.79
HDAC2-209ENST00000520895 CHMP4AQ9BY43 222 aa19.96■□□□□ 0.79
HDAC2-209ENST00000520895 ZNF652Q9Y2D9 606 aa19.96■□□□□ 0.79
HDAC2-209ENST00000520895 BICDL1Q6ZP65 573 aa19.95■□□□□ 0.78
HDAC2-209ENST00000520895 SYT17Q9BSW7 474 aa19.95■□□□□ 0.78
HDAC2-209ENST00000520895 DDX21Q9NR30 783 aaKnown RBP eCLIP19.95■□□□□ 0.78
HDAC2-209ENST00000520895 CHPF2Q9P2E5 772 aa19.95■□□□□ 0.78
HDAC2-209ENST00000520895 ZNF521Q96K83 1311 aa19.95■□□□□ 0.78
HDAC2-209ENST00000520895 ANXA1P04083 346 aa19.94■□□□□ 0.78
HDAC2-209ENST00000520895 TM4SF1P30408 202 aa19.94■□□□□ 0.78
HDAC2-209ENST00000520895 NFIXQ14938 502 aa19.94■□□□□ 0.78
HDAC2-209ENST00000520895 PDIA6Q15084 440 aa19.94■□□□□ 0.78
HDAC2-209ENST00000520895 PROSER3Q2NL68 480 aa19.94■□□□□ 0.78
HDAC2-209ENST00000520895 DBF4Q9UBU7 674 aaPredicted RBP19.94■□□□□ 0.78
HDAC2-209ENST00000520895 DDR1Q08345 913 aa19.93■□□□□ 0.78
HDAC2-209ENST00000520895 TWISTNBQ3B726 338 aaPredicted RBP19.93■□□□□ 0.78
HDAC2-209ENST00000520895 SPINK5Q9NQ38 1064 aaPredicted RBP19.93■□□□□ 0.78
HDAC2-209ENST00000520895 CCDC30Q5VVM6 783 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms