RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 PELP1Q8IZL8 1130 aaKnown RBP12.77□□□□□ -0.37
CTNNA1-221ENST00000520339 CCER1Q8TC90 406 aaPredicted RBP12.77□□□□□ -0.37
CTNNA1-221ENST00000520339 PANK3Q9H999 370 aa12.77□□□□□ -0.37
CTNNA1-221ENST00000520339 SPDYE16A6NNV3 312 aaPredicted RBP12.76□□□□□ -0.37
CTNNA1-221ENST00000520339 RBM26Q5T8P6 1007 aaKnown RBP12.76□□□□□ -0.37
CTNNA1-221ENST00000520339 SLC24A3Q9HC58 644 aa12.76□□□□□ -0.37
CTNNA1-221ENST00000520339 NCAPD2Q15021 1401 aa12.76□□□□□ -0.37
CTNNA1-221ENST00000520339 PAPPAQ13219 1627 aa12.76□□□□□ -0.37
CTNNA1-221ENST00000520339 KIF3CO14782 793 aa12.75□□□□□ -0.37
CTNNA1-221ENST00000520339 MPRIPQ6WCQ1 1025 aa12.75□□□□□ -0.37
CTNNA1-221ENST00000520339 COLQQ9Y215 455 aaPredicted RBP12.75□□□□□ -0.37
CTNNA1-221ENST00000520339 MAP3K5Q99683 1374 aa12.74□□□□□ -0.37
CTNNA1-221ENST00000520339 ZMYND10O75800 440 aa12.74□□□□□ -0.37
CTNNA1-221ENST00000520339 TNNT2P45379 298 aaPredicted RBP12.74□□□□□ -0.37
CTNNA1-221ENST00000520339 EIF4A2Q14240 407 aaKnown RBP12.74□□□□□ -0.37
CTNNA1-221ENST00000520339 COL23A1Q86Y22 540 aaPredicted RBP12.74□□□□□ -0.37
CTNNA1-221ENST00000520339 PIGBQ92521 554 aa12.74□□□□□ -0.37
CTNNA1-221ENST00000520339 SPG7Q9UQ90 795 aa12.74□□□□□ -0.37
CTNNA1-221ENST00000520339 BTAF1O14981 1849 aa12.74□□□□□ -0.37
CTNNA1-221ENST00000520339 POLD1P28340 1107 aa12.73□□□□□ -0.37
CTNNA1-221ENST00000520339 PDIA6Q15084 440 aa12.73□□□□□ -0.37
CTNNA1-221ENST00000520339 SMARCC1Q92922 1105 aaPredicted RBP12.73□□□□□ -0.37
CTNNA1-221ENST00000520339 PALLDQ8WX93 1383 aa12.72□□□□□ -0.37
CTNNA1-221ENST00000520339 HMGB2P26583 209 aaKnown RBP12.72□□□□□ -0.37
CTNNA1-221ENST00000520339 PHKG2P15735 406 aa12.71□□□□□ -0.37
CTNNA1-221ENST00000520339 MAP3K9P80192 1104 aa12.71□□□□□ -0.37
CTNNA1-221ENST00000520339 IFNL2Q8IZJ0 200 aa12.71□□□□□ -0.37
CTNNA1-221ENST00000520339 TMEM132AQ24JP5 1023 aa12.7□□□□□ -0.38
CTNNA1-221ENST00000520339 GPIHBP1Q8IV16 184 aa12.7□□□□□ -0.38
CTNNA1-221ENST00000520339 MYOM1P52179 1685 aa12.7□□□□□ -0.38
CTNNA1-221ENST00000520339 IGSF1Q8N6C5 1336 aa12.69□□□□□ -0.38
CTNNA1-221ENST00000520339 BRPF1P55201 1214 aaPredicted RBP12.69□□□□□ -0.38
CTNNA1-221ENST00000520339 TMEM92Q6UXU6 159 aa12.69□□□□□ -0.38
CTNNA1-221ENST00000520339 MORC1Q86VD1 984 aa12.69□□□□□ -0.38
CTNNA1-221ENST00000520339 FLAD1Q8NFF5 587 aa12.69□□□□□ -0.38
CTNNA1-221ENST00000520339 SLC39A7Q92504 469 aa12.69□□□□□ -0.38
CTNNA1-221ENST00000520339 KAT6BQ8WYB5 2073 aa12.69□□□□□ -0.38
CTNNA1-221ENST00000520339 LOC102724428A0A0B4J2F2 783 aa12.68□□□□□ -0.38
CTNNA1-221ENST00000520339 SIK1P57059 783 aa12.68□□□□□ -0.38
CTNNA1-221ENST00000520339 AMIGO3Q86WK7 504 aa12.68□□□□□ -0.38
CTNNA1-221ENST00000520339 TMOD3Q9NYL9 352 aa12.68□□□□□ -0.38
CTNNA1-221ENST00000520339 ASAP1Q9ULH1 1129 aa12.68□□□□□ -0.38
CTNNA1-221ENST00000520339 RGPD2P0DJD1 1756 aa12.68□□□□□ -0.38
CTNNA1-221ENST00000520339 SHANK3Q9BYB0 1731 aa12.68□□□□□ -0.38
CTNNA1-221ENST00000520339 GPR162Q16538 588 aa12.67□□□□□ -0.38
CTNNA1-221ENST00000520339 MSL1Q68DK7 614 aa12.67□□□□□ -0.38
CTNNA1-221ENST00000520339 NLGN2Q8NFZ4 835 aa12.67□□□□□ -0.38
CTNNA1-221ENST00000520339 ATG3Q9NT62 314 aa12.67□□□□□ -0.38
CTNNA1-221ENST00000520339 KNSTRNQ9Y448 316 aa12.67□□□□□ -0.38
CTNNA1-221ENST00000520339 PLEKHG2Q9H7P9 1386 aa12.67□□□□□ -0.38
CTNNA1-221ENST00000520339 C7P10643 843 aa12.66□□□□□ -0.38
CTNNA1-221ENST00000520339 ITPK1Q13572 414 aa12.66□□□□□ -0.38
CTNNA1-221ENST00000520339 NEUROD2Q15784 382 aa12.66□□□□□ -0.38
CTNNA1-221ENST00000520339 PLEKHO1Q53GL0 409 aaPredicted RBP12.66□□□□□ -0.38
CTNNA1-221ENST00000520339 SMIM5Q71RC9 77 aa12.66□□□□□ -0.38
CTNNA1-221ENST00000520339 ZNF784Q8NCA9 323 aaPredicted RBP12.66□□□□□ -0.38
CTNNA1-221ENST00000520339 AK7Q96M32 723 aa12.66□□□□□ -0.38
CTNNA1-221ENST00000520339 DOT1LQ8TEK3 1739 aa12.65□□□□□ -0.38
CTNNA1-221ENST00000520339 KIF20BQ96Q89 1820 aa12.65□□□□□ -0.38
CTNNA1-221ENST00000520339 ERVV-2B6SEH9 535 aa12.65□□□□□ -0.38
CTNNA1-221ENST00000520339 AMOTQ4VCS5 1084 aa12.65□□□□□ -0.38
CTNNA1-221ENST00000520339 AEBP1Q8IUX7 1158 aa12.65□□□□□ -0.38
CTNNA1-221ENST00000520339 LINC00116Q8NCU8 138 aa12.65□□□□□ -0.38
CTNNA1-221ENST00000520339 KIF7Q2M1P5 1343 aa12.64□□□□□ -0.39
CTNNA1-221ENST00000520339 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.64□□□□□ -0.39
CTNNA1-221ENST00000520339 POTEFA5A3E0 1075 aa12.64□□□□□ -0.39
CTNNA1-221ENST00000520339 HSP90AB1P08238 724 aaKnown RBP12.64□□□□□ -0.39
CTNNA1-221ENST00000520339 IL13P35225 146 aa12.64□□□□□ -0.39
CTNNA1-221ENST00000520339 KRI1Q8N9T8 703 aaKnown RBP12.64□□□□□ -0.39
CTNNA1-221ENST00000520339 DCAF5Q96JK2 942 aa12.64□□□□□ -0.39
CTNNA1-221ENST00000520339 LY75O60449 1722 aa12.63□□□□□ -0.39
CTNNA1-221ENST00000520339 GRXCR2A6NFK2 248 aa12.63□□□□□ -0.39
CTNNA1-221ENST00000520339 PER1O15534 1290 aaPredicted RBP12.63□□□□□ -0.39
CTNNA1-221ENST00000520339 SSFA2P28290 1259 aa12.63□□□□□ -0.39
CTNNA1-221ENST00000520339 ATP6V1AP38606 617 aa12.63□□□□□ -0.39
CTNNA1-221ENST00000520339 SULT6B1Q6IMI4 303 aa12.63□□□□□ -0.39
CTNNA1-221ENST00000520339 ZNF530Q6P9A1 599 aaPredicted RBP12.63□□□□□ -0.39
CTNNA1-221ENST00000520339 SLC4A9Q96Q91 983 aa12.63□□□□□ -0.39
CTNNA1-221ENST00000520339 CD2APQ9Y5K6 639 aa12.63□□□□□ -0.39
CTNNA1-221ENST00000520339 GTF3C3Q9Y5Q9 886 aa12.63□□□□□ -0.39
CTNNA1-221ENST00000520339 PHF14O94880 888 aa12.62□□□□□ -0.39
CTNNA1-221ENST00000520339 METRNQ9UJH8 293 aa12.62□□□□□ -0.39
CTNNA1-221ENST00000520339 GNPATO15228 680 aa12.61□□□□□ -0.39
CTNNA1-221ENST00000520339 YBX3P16989 372 aaKnown RBP eCLIP12.61□□□□□ -0.39
CTNNA1-221ENST00000520339 ANKRD26Q9UPS8 1709 aa12.61□□□□□ -0.39
CTNNA1-221ENST00000520339 PKD1L3Q7Z443 1732 aa12.6□□□□□ -0.39
CTNNA1-221ENST00000520339 GRIN3BO60391 1043 aa12.6□□□□□ -0.39
CTNNA1-221ENST00000520339 MTHFSP49914 203 aa12.6□□□□□ -0.39
CTNNA1-221ENST00000520339 CABP4P57796 275 aa12.6□□□□□ -0.39
CTNNA1-221ENST00000520339 OXER1Q8TDS5 423 aa12.6□□□□□ -0.39
CTNNA1-221ENST00000520339 KDRP35968 1356 aa12.59□□□□□ -0.39
CTNNA1-221ENST00000520339 C1orf141Q5JVX7 400 aa12.59□□□□□ -0.39
CTNNA1-221ENST00000520339 RC3H1Q5TC82 1133 aaKnown RBP12.59□□□□□ -0.39
CTNNA1-221ENST00000520339 C3orf67Q6ZVT6 689 aa12.59□□□□□ -0.39
CTNNA1-221ENST00000520339 UTRNP46939 3433 aa12.59□□□□□ -0.39
CTNNA1-221ENST00000520339 KDM6AO15550 1401 aaPredicted RBP12.59□□□□□ -0.39
CTNNA1-221ENST00000520339 QSER1Q2KHR3 1735 aa12.59□□□□□ -0.39
CTNNA1-221ENST00000520339 NFATC2IPQ8NCF5 419 aa12.58□□□□□ -0.4
CTNNA1-221ENST00000520339 TOGARAM1Q9Y4F4 1720 aa12.58□□□□□ -0.4
CTNNA1-221ENST00000520339 COL24A1Q17RW2 1714 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms