RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 EIF5P55010 431 aaKnown RBP15.15■□□□□ 0.02
SPIDR-212ENST00000519661 EIF4A1P60842 406 aaKnown RBP15.15■□□□□ 0.02
SPIDR-212ENST00000519661 GIGYF1O75420 1035 aaPredicted RBP15.14■□□□□ 0.01
SPIDR-212ENST00000519661 ZBTB7AO95365 584 aa15.14■□□□□ 0.01
SPIDR-212ENST00000519661 CFAP44Q96MT7 982 aa15.14■□□□□ 0.01
SPIDR-212ENST00000519661 THUMPD2Q9BTF0 503 aaKnown RBP15.14■□□□□ 0.01
SPIDR-212ENST00000519661 C4AP0C0L4 1744 aa15.14■□□□□ 0.01
SPIDR-212ENST00000519661 IL6STP40189 918 aaPredicted RBP15.13■□□□□ 0.01
SPIDR-212ENST00000519661 TRAPPC3LQ5T215 181 aa15.13■□□□□ 0.01
SPIDR-212ENST00000519661 ARHGEF1Q92888 912 aaKnown RBP15.13■□□□□ 0.01
SPIDR-212ENST00000519661 ZBTB1Q9Y2K1 713 aa15.13■□□□□ 0.01
SPIDR-212ENST00000519661 LAMB4A4D0S4 1761 aa15.13■□□□□ 0.01
SPIDR-212ENST00000519661 ERBB4Q15303 1308 aa15.13■□□□□ 0.01
SPIDR-212ENST00000519661 USP42Q9H9J4 1324 aaKnown RBP15.13■□□□□ 0.01
SPIDR-212ENST00000519661 HOXB7P09629 217 aa15.12■□□□□ 0.01
SPIDR-212ENST00000519661 CALD1Q05682 793 aaKnown RBP15.12■□□□□ 0.01
SPIDR-212ENST00000519661 IL16Q14005 1332 aa15.12■□□□□ 0.01
SPIDR-212ENST00000519661 COL15A1P39059 1388 aa15.11■□□□□ 0.01
SPIDR-212ENST00000519661 NLGN1Q8N2Q7 840 aa15.11■□□□□ 0.01
SPIDR-212ENST00000519661 IFT57Q9NWB7 429 aa15.11■□□□□ 0.01
SPIDR-212ENST00000519661 RRP7AQ9Y3A4 280 aaKnown RBP15.11■□□□□ 0.01
SPIDR-212ENST00000519661 USP16Q9Y5T5 823 aa15.11■□□□□ 0.01
SPIDR-212ENST00000519661 GYS1P13807 737 aa15.1■□□□□ 0.01
SPIDR-212ENST00000519661 NARFQ9UHQ1 456 aa15.1■□□□□ 0.01
SPIDR-212ENST00000519661 WWC1Q8IX03 1113 aa15.09■□□□□ 0.01
SPIDR-212ENST00000519661 ARXQ96QS3 562 aa15.09■□□□□ 0.01
SPIDR-212ENST00000519661 TSPYL4Q9UJ04 414 aa15.09■□□□□ 0.01
SPIDR-212ENST00000519661 ATF5Q9Y2D1 282 aaPredicted RBP15.09■□□□□ 0.01
SPIDR-212ENST00000519661 A0A087WZG4 1122 aa15.08■□□□□ 0
SPIDR-212ENST00000519661 POLD1P28340 1107 aa15.08■□□□□ 0
SPIDR-212ENST00000519661 RFC4P35249 363 aa15.08■□□□□ 0
SPIDR-212ENST00000519661 LRP10Q7Z4F1 713 aa15.08■□□□□ 0
SPIDR-212ENST00000519661 MIS18AQ9NYP9 233 aa15.08■□□□□ 0
SPIDR-212ENST00000519661 ZNF521Q96K83 1311 aa15.08■□□□□ 0
SPIDR-212ENST00000519661 SCN7AQ01118 1682 aa15.07■□□□□ 0
SPIDR-212ENST00000519661 PRAMEF22A3QJZ6 481 aa15.07■□□□□ 0
SPIDR-212ENST00000519661 NBPF26B4DH59 902 aa15.07■□□□□ 0
SPIDR-212ENST00000519661 PHF14O94880 888 aa15.07■□□□□ 0
SPIDR-212ENST00000519661 GNAI1P63096 354 aa15.07■□□□□ 0
SPIDR-212ENST00000519661 NBPF10Q6P3W6 841 aaKnown RBP15.07■□□□□ 0
SPIDR-212ENST00000519661 NBPF15Q8N660 670 aa15.07■□□□□ 0
SPIDR-212ENST00000519661 BCL2L12Q9HB09 334 aa15.07■□□□□ 0
SPIDR-212ENST00000519661 TM4SF1P30408 202 aa15.06■□□□□ 0
SPIDR-212ENST00000519661 NEUROD2Q15784 382 aa15.06■□□□□ 0
SPIDR-212ENST00000519661 SMIM5Q71RC9 77 aa15.06■□□□□ 0
SPIDR-212ENST00000519661 WDR63Q8IWG1 891 aa15.06■□□□□ 0
SPIDR-212ENST00000519661 CD2APQ9Y5K6 639 aa15.06■□□□□ 0
SPIDR-212ENST00000519661 A1BGP04217 495 aa15.05■□□□□ -0
SPIDR-212ENST00000519661 CLEC4GQ6UXB4 293 aa15.05■□□□□ -0
SPIDR-212ENST00000519661 MBIPQ9NS73 344 aa15.05■□□□□ -0
SPIDR-212ENST00000519661 NRXN2Q9P2S2 1712 aa15.05■□□□□ -0
SPIDR-212ENST00000519661 KIF13BQ9NQT8 1826 aa15.04■□□□□ -0
SPIDR-212ENST00000519661 C10orf71Q711Q0 1435 aa15.04■□□□□ -0
SPIDR-212ENST00000519661 PDIA6Q15084 440 aa15.04■□□□□ -0
SPIDR-212ENST00000519661 DIEXFQ68CQ4 756 aaKnown RBP15.04■□□□□ -0
SPIDR-212ENST00000519661 SYT17Q9BSW7 474 aa15.04■□□□□ -0
SPIDR-212ENST00000519661 BCORQ6W2J9 1755 aa15.03■□□□□ -0
SPIDR-212ENST00000519661 CAMTA2O94983 1202 aa15.03■□□□□ -0
SPIDR-212ENST00000519661 CANXP27824 592 aaKnown RBP15.03■□□□□ -0
SPIDR-212ENST00000519661 FHDC1Q9C0D6 1143 aaPredicted RBP15.03■□□□□ -0
SPIDR-212ENST00000519661 MMP10P09238 476 aa15.02■□□□□ -0
SPIDR-212ENST00000519661 FKBP8Q14318 412 aa15.02■□□□□ -0
SPIDR-212ENST00000519661 SRP68Q9UHB9 627 aaKnown RBP15.02■□□□□ -0
SPIDR-212ENST00000519661 ERVV-1B6SEH8 477 aa15.01□□□□□ -0.01
SPIDR-212ENST00000519661 POLRMTO00411 1230 aaKnown RBP15.01□□□□□ -0.01
SPIDR-212ENST00000519661 MSH5O43196 834 aa15.01□□□□□ -0.01
SPIDR-212ENST00000519661 ZPR1O75312 459 aa15.01□□□□□ -0.01
SPIDR-212ENST00000519661 USPL1Q5W0Q7 1092 aa15.01□□□□□ -0.01
SPIDR-212ENST00000519661 CHMP4AQ9BY43 222 aa15.01□□□□□ -0.01
SPIDR-212ENST00000519661 PPP1R1BQ9UD71 204 aaPredicted RBP15.01□□□□□ -0.01
SPIDR-212ENST00000519661 ATP10DQ9P241 1426 aa15□□□□□ -0.01
SPIDR-212ENST00000519661 DDR1Q08345 913 aa15□□□□□ -0.01
SPIDR-212ENST00000519661 MSL1Q68DK7 614 aa15□□□□□ -0.01
SPIDR-212ENST00000519661 FAM9BQ8IZU0 186 aa15□□□□□ -0.01
SPIDR-212ENST00000519661 NFIXQ14938 502 aa14.99□□□□□ -0.01
SPIDR-212ENST00000519661 DDX21Q9NR30 783 aaKnown RBP eCLIP14.99□□□□□ -0.01
SPIDR-212ENST00000519661 KIAA1551Q9HCM1 1747 aa14.99□□□□□ -0.01
SPIDR-212ENST00000519661 IBTKQ9P2D0 1353 aaPredicted RBP14.98□□□□□ -0.01
SPIDR-212ENST00000519661 KRT24Q2M2I5 525 aa14.98□□□□□ -0.01
SPIDR-212ENST00000519661 DUSP27Q5VZP5 1158 aa14.98□□□□□ -0.01
SPIDR-212ENST00000519661 DZIP3Q86Y13 1208 aaKnown RBP14.98□□□□□ -0.01
SPIDR-212ENST00000519661 CARMIL3Q8ND23 1372 aa14.98□□□□□ -0.01
SPIDR-212ENST00000519661 TGFB2P61812 414 aa14.97□□□□□ -0.01
SPIDR-212ENST00000519661 MAP3K15Q6ZN16 1313 aa14.96□□□□□ -0.01
SPIDR-212ENST00000519661 FANCIQ9NVI1 1328 aa14.96□□□□□ -0.01
SPIDR-212ENST00000519661 PXDNLA1KZ92 1463 aa14.96□□□□□ -0.01
SPIDR-212ENST00000519661 RIC1Q4ADV7 1423 aa14.96□□□□□ -0.01
SPIDR-212ENST00000519661 MIER1Q8N108 512 aa14.96□□□□□ -0.01
SPIDR-212ENST00000519661 DBF4Q9UBU7 674 aaPredicted RBP14.96□□□□□ -0.01
SPIDR-212ENST00000519661 TBC1D2BQ9UPU7 963 aa14.96□□□□□ -0.01
SPIDR-212ENST00000519661 ZNF652Q9Y2D9 606 aa14.96□□□□□ -0.01
SPIDR-212ENST00000519661 PARP3Q9Y6F1 533 aa14.96□□□□□ -0.01
SPIDR-212ENST00000519661 HDGFL1Q5TGJ6 251 aa14.95□□□□□ -0.02
SPIDR-212ENST00000519661 C8orf58Q8NAV2 365 aa14.95□□□□□ -0.02
SPIDR-212ENST00000519661 GOLGB1Q14789 3259 aaKnown RBP14.95□□□□□ -0.02
SPIDR-212ENST00000519661 UTRNP46939 3433 aa14.94□□□□□ -0.02
SPIDR-212ENST00000519661 PROSER3Q2NL68 480 aa14.94□□□□□ -0.02
SPIDR-212ENST00000519661 TBC1D9BQ66K14 1250 aa14.94□□□□□ -0.02
SPIDR-212ENST00000519661 GIGYF2Q6Y7W6 1299 aaKnown RBP14.94□□□□□ -0.02
SPIDR-212ENST00000519661 NPM2Q86SE8 214 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms