RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 ZNF827Q17R98 1081 aa10.17□□□□□ -0.78
CLK4-203ENST00000519583 KDM2BQ8NHM5 1336 aa10.17□□□□□ -0.78
CLK4-203ENST00000519583 ZNF853P0CG23 659 aa10.17□□□□□ -0.78
CLK4-203ENST00000519583 TAF7Q15545 349 aaPredicted RBP10.17□□□□□ -0.78
CLK4-203ENST00000519583 SLC4A9Q96Q91 983 aa10.17□□□□□ -0.78
CLK4-203ENST00000519583 MBIPQ9NS73 344 aa10.17□□□□□ -0.78
CLK4-203ENST00000519583 ZNF790Q6PG37 636 aa10.17□□□□□ -0.78
CLK4-203ENST00000519583 KCNQ3O43525 872 aa10.16□□□□□ -0.78
CLK4-203ENST00000519583 ZKSCAN2Q63HK3 967 aa10.16□□□□□ -0.78
CLK4-203ENST00000519583 LINC00116Q8NCU8 138 aa10.16□□□□□ -0.78
CLK4-203ENST00000519583 MIS18AQ9NYP9 233 aa10.16□□□□□ -0.78
CLK4-203ENST00000519583 SKAP1Q86WV1 359 aa10.16□□□□□ -0.78
CLK4-203ENST00000519583 AKT1S1Q96B36 256 aa10.16□□□□□ -0.78
CLK4-203ENST00000519583 TFCP2L1Q9NZI6 479 aa10.16□□□□□ -0.78
CLK4-203ENST00000519583 HMGB2P26583 209 aaKnown RBP10.16□□□□□ -0.78
CLK4-203ENST00000519583 CENPQQ7L2Z9 268 aaPredicted RBP10.16□□□□□ -0.78
CLK4-203ENST00000519583 CFAP44Q96MT7 982 aa10.16□□□□□ -0.78
CLK4-203ENST00000519583 PAPPAQ13219 1627 aa10.15□□□□□ -0.78
CLK4-203ENST00000519583 TSPYL6Q8N831 410 aa10.15□□□□□ -0.78
CLK4-203ENST00000519583 ZNF496Q96IT1 587 aaPredicted RBP10.15□□□□□ -0.78
CLK4-203ENST00000519583 AK7Q96M32 723 aa10.15□□□□□ -0.78
CLK4-203ENST00000519583 SIPA1L3O60292 1781 aaPredicted RBP10.15□□□□□ -0.78
CLK4-203ENST00000519583 DNAJC10Q8IXB1 793 aa10.15□□□□□ -0.79
CLK4-203ENST00000519583 FTSJ3Q8IY81 847 aaKnown RBP10.15□□□□□ -0.79
CLK4-203ENST00000519583 NOB1Q9ULX3 412 aaKnown RBP10.15□□□□□ -0.79
CLK4-203ENST00000519583 C5P01031 1676 aa10.14□□□□□ -0.79
CLK4-203ENST00000519583 ELL2O00472 640 aaPredicted RBP10.14□□□□□ -0.79
CLK4-203ENST00000519583 TRIM27P14373 513 aa10.14□□□□□ -0.79
CLK4-203ENST00000519583 DZIP1LQ8IYY4 767 aaKnown RBP10.14□□□□□ -0.79
CLK4-203ENST00000519583 FMNL2Q96PY5 1086 aa10.14□□□□□ -0.79
CLK4-203ENST00000519583 KCPQ6ZWJ8 1503 aa10.14□□□□□ -0.79
CLK4-203ENST00000519583 VAMP4O75379 141 aa10.14□□□□□ -0.79
CLK4-203ENST00000519583 ALDH1L2Q3SY69 923 aa10.14□□□□□ -0.79
CLK4-203ENST00000519583 PDGFDQ9GZP0 370 aaPredicted RBP10.14□□□□□ -0.79
CLK4-203ENST00000519583 GNPATO15228 680 aa10.13□□□□□ -0.79
CLK4-203ENST00000519583 TSPYL4Q9UJ04 414 aa10.13□□□□□ -0.79
CLK4-203ENST00000519583 TAF1LQ8IZX4 1826 aa10.13□□□□□ -0.79
CLK4-203ENST00000519583 MSH5O43196 834 aa10.13□□□□□ -0.79
CLK4-203ENST00000519583 ATF7IPQ6VMQ6 1270 aa10.13□□□□□ -0.79
CLK4-203ENST00000519583 C8orf58Q8NAV2 365 aa10.13□□□□□ -0.79
CLK4-203ENST00000519583 KIF16BQ96L93 1317 aa10.13□□□□□ -0.79
CLK4-203ENST00000519583 HEG1Q9ULI3 1381 aa10.13□□□□□ -0.79
CLK4-203ENST00000519583 TCERG1O14776 1098 aaKnown RBP10.13□□□□□ -0.79
CLK4-203ENST00000519583 PHF14O94880 888 aa10.13□□□□□ -0.79
CLK4-203ENST00000519583 MVPQ14764 893 aaKnown RBP10.13□□□□□ -0.79
CLK4-203ENST00000519583 SMIM5Q71RC9 77 aa10.13□□□□□ -0.79
CLK4-203ENST00000519583 C4BP0C0L5 1744 aa10.13□□□□□ -0.79
CLK4-203ENST00000519583 MS4A1P11836 297 aa10.12□□□□□ -0.79
CLK4-203ENST00000519583 TWISTNBQ3B726 338 aaPredicted RBP10.12□□□□□ -0.79
CLK4-203ENST00000519583 VSIG10Q8N0Z9 540 aa10.12□□□□□ -0.79
CLK4-203ENST00000519583 ZNF428Q96B54 188 aa10.12□□□□□ -0.79
CLK4-203ENST00000519583 PNPLA7Q6ZV29 1317 aa10.12□□□□□ -0.79
CLK4-203ENST00000519583 IGHDP01880 384 aa10.12□□□□□ -0.79
CLK4-203ENST00000519583 CRKLP46109 303 aaKnown RBP10.12□□□□□ -0.79
CLK4-203ENST00000519583 CNTNAP4Q9C0A0 1308 aa10.12□□□□□ -0.79
CLK4-203ENST00000519583 UBR2Q8IWV8 1755 aa10.11□□□□□ -0.79
CLK4-203ENST00000519583 CHL1O00533 1208 aa10.11□□□□□ -0.79
CLK4-203ENST00000519583 ZBTB7AO95365 584 aa10.11□□□□□ -0.79
CLK4-203ENST00000519583 STARD3NLO95772 234 aa10.11□□□□□ -0.79
CLK4-203ENST00000519583 RC3H1Q5TC82 1133 aaKnown RBP10.11□□□□□ -0.79
CLK4-203ENST00000519583 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.11□□□□□ -0.79
CLK4-203ENST00000519583 IPO8O15397 1037 aaKnown RBP10.11□□□□□ -0.79
CLK4-203ENST00000519583 CYP19A1P11511 503 aaPredicted RBP10.11□□□□□ -0.79
CLK4-203ENST00000519583 AMIGO3Q86WK7 504 aa10.11□□□□□ -0.79
CLK4-203ENST00000519583 COL23A1Q86Y22 540 aaPredicted RBP10.11□□□□□ -0.79
CLK4-203ENST00000519583 MRPL50Q8N5N7 158 aaKnown RBP10.11□□□□□ -0.79
CLK4-203ENST00000519583 TEX13AQ9BXU3 409 aaPredicted RBP10.11□□□□□ -0.79
CLK4-203ENST00000519583 RTCBQ9Y3I0 505 aaKnown RBP10.11□□□□□ -0.79
CLK4-203ENST00000519583 ZNF831Q5JPB2 1677 aa10.11□□□□□ -0.79
CLK4-203ENST00000519583 TJP1Q07157 1748 aa10.11□□□□□ -0.79
CLK4-203ENST00000519583 PRAMEF22A3QJZ6 481 aa10.1□□□□□ -0.79
CLK4-203ENST00000519583 SNRPA1P09661 255 aaKnown RBP10.1□□□□□ -0.79
CLK4-203ENST00000519583 KRT24Q2M2I5 525 aa10.1□□□□□ -0.79
CLK4-203ENST00000519583 ITPRIPQ8IWB1 547 aa10.1□□□□□ -0.79
CLK4-203ENST00000519583 CCDC87Q9NVE4 849 aa10.1□□□□□ -0.79
CLK4-203ENST00000519583 PCDHB15Q9Y5E8 787 aa10.1□□□□□ -0.79
CLK4-203ENST00000519583 EIF4A1P60842 406 aaKnown RBP10.1□□□□□ -0.79
CLK4-203ENST00000519583 AAMPQ13685 434 aa10.1□□□□□ -0.79
CLK4-203ENST00000519583 TMEM57Q8N5G2 664 aa10.1□□□□□ -0.79
CLK4-203ENST00000519583 FLAD1Q8NFF5 587 aa10.1□□□□□ -0.79
CLK4-203ENST00000519583 BRPF1P55201 1214 aaPredicted RBP10.1□□□□□ -0.79
CLK4-203ENST00000519583 INTS5Q6P9B9 1019 aaKnown RBP10.1□□□□□ -0.79
CLK4-203ENST00000519583 BABAM1Q9NWV8 329 aa10.1□□□□□ -0.79
CLK4-203ENST00000519583 COL5A3P25940 1745 aaPredicted RBP10.1□□□□□ -0.79
CLK4-203ENST00000519583 TUBGCP6Q96RT7 1819 aa10.09□□□□□ -0.79
CLK4-203ENST00000519583 RPS6KA4O75676 772 aa10.09□□□□□ -0.79
CLK4-203ENST00000519583 SSFA2P28290 1259 aa10.09□□□□□ -0.79
CLK4-203ENST00000519583 ATF5Q9Y2D1 282 aaPredicted RBP10.09□□□□□ -0.79
CLK4-203ENST00000519583 USP16Q9Y5T5 823 aa10.09□□□□□ -0.79
CLK4-203ENST00000519583 ZBTB1Q9Y2K1 713 aa10.09□□□□□ -0.79
CLK4-203ENST00000519583 KDM3BQ7LBC6 1761 aa10.09□□□□□ -0.79
CLK4-203ENST00000519583 MYH14Q7Z406 1995 aaKnown RBP10.09□□□□□ -0.79
CLK4-203ENST00000519583 TRAPPC3LQ5T215 181 aa10.09□□□□□ -0.79
CLK4-203ENST00000519583 DDX19BQ9UMR2 479 aa10.08□□□□□ -0.8
CLK4-203ENST00000519583 ZNF330Q9Y3S2 320 aaPredicted RBP10.08□□□□□ -0.8
CLK4-203ENST00000519583 UBR3Q6ZT12 1888 aa10.08□□□□□ -0.8
CLK4-203ENST00000519583 GIGYF1O75420 1035 aaPredicted RBP10.08□□□□□ -0.8
CLK4-203ENST00000519583 A1BGP04217 495 aa10.08□□□□□ -0.8
CLK4-203ENST00000519583 MTFR1LQ9H019 292 aa10.08□□□□□ -0.8
CLK4-203ENST00000519583 SPON1Q9HCB6 807 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms