RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 NPHP3Q7Z494 1330 aa10.01□□□□□ -0.81
PCM1-212ENST00000519253 FOSBP53539 338 aa10.01□□□□□ -0.81
PCM1-212ENST00000519253 TXNDC2Q86VQ3 553 aa10.01□□□□□ -0.81
PCM1-212ENST00000519253 PDLIM2Q96JY6 352 aa10.01□□□□□ -0.81
PCM1-212ENST00000519253 PBRM1Q86U86 1689 aa10.01□□□□□ -0.81
PCM1-212ENST00000519253 TUBB4AP04350 444 aa10.01□□□□□ -0.81
PCM1-212ENST00000519253 TRDNQ13061 729 aa10.01□□□□□ -0.81
PCM1-212ENST00000519253 TARBP1Q13395 1621 aaKnown RBP10.01□□□□□ -0.81
PCM1-212ENST00000519253 LEKR1Q6ZMV7 388 aa10.01□□□□□ -0.81
PCM1-212ENST00000519253 OTUD7AQ8TE49 926 aaPredicted RBP10.01□□□□□ -0.81
PCM1-212ENST00000519253 SYT1P21579 422 aa10.01□□□□□ -0.81
PCM1-212ENST00000519253 NLRP6P59044 892 aa10.01□□□□□ -0.81
PCM1-212ENST00000519253 STX1AQ16623 288 aa10.01□□□□□ -0.81
PCM1-212ENST00000519253 ANKRD20A12PQ8NF67 263 aa10.01□□□□□ -0.81
PCM1-212ENST00000519253 ECHDC1Q9NTX5 307 aa10.01□□□□□ -0.81
PCM1-212ENST00000519253 MIS18AQ9NYP9 233 aa10.01□□□□□ -0.81
PCM1-212ENST00000519253 UTP14CQ5TAP6 766 aaKnown RBP10.01□□□□□ -0.81
PCM1-212ENST00000519253 PPIP5K1Q6PFW1 1433 aa10□□□□□ -0.81
PCM1-212ENST00000519253 ERICH4A6NGS2 130 aa10□□□□□ -0.81
PCM1-212ENST00000519253 DNM1Q05193 864 aaKnown RBP10□□□□□ -0.81
PCM1-212ENST00000519253 TYRO3Q06418 890 aa10□□□□□ -0.81
PCM1-212ENST00000519253 GABPB1Q06547 395 aaPredicted RBP10□□□□□ -0.81
PCM1-212ENST00000519253 RALYLQ86SE5 291 aaKnown RBP10□□□□□ -0.81
PCM1-212ENST00000519253 TIGD1Q96MW7 591 aa10□□□□□ -0.81
PCM1-212ENST00000519253 PLEKHF1Q96S99 279 aa10□□□□□ -0.81
PCM1-212ENST00000519253 SPG7Q9UQ90 795 aa10□□□□□ -0.81
PCM1-212ENST00000519253 TTC21BQ7Z4L5 1316 aa10□□□□□ -0.81
PCM1-212ENST00000519253 GNAT3A8MTJ3 354 aa10□□□□□ -0.81
PCM1-212ENST00000519253 WASLO00401 505 aaPredicted RBP10□□□□□ -0.81
PCM1-212ENST00000519253 SERPINC1P01008 464 aa10□□□□□ -0.81
PCM1-212ENST00000519253 TAF7LQ5H9L4 462 aa10□□□□□ -0.81
PCM1-212ENST00000519253 RHPN1Q8TCX5 695 aa10□□□□□ -0.81
PCM1-212ENST00000519253 EVI5LQ96CN4 794 aa10□□□□□ -0.81
PCM1-212ENST00000519253 SETQ01105 290 aaPredicted RBP10□□□□□ -0.81
PCM1-212ENST00000519253 PKP1Q13835 747 aa10□□□□□ -0.81
PCM1-212ENST00000519253 RIC3Q7Z5B4 369 aa10□□□□□ -0.81
PCM1-212ENST00000519253 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10□□□□□ -0.81
PCM1-212ENST00000519253 ZNF397Q8NF99 534 aaPredicted RBP10□□□□□ -0.81
PCM1-212ENST00000519253 ERLIN1O75477 346 aa9.99□□□□□ -0.81
PCM1-212ENST00000519253 PDILTQ8N807 584 aa9.99□□□□□ -0.81
PCM1-212ENST00000519253 IPO7O95373 1038 aaKnown RBP9.99□□□□□ -0.81
PCM1-212ENST00000519253 ANO6Q4KMQ2 910 aa9.99□□□□□ -0.81
PCM1-212ENST00000519253 DACT1Q9NYF0 836 aa9.99□□□□□ -0.81
PCM1-212ENST00000519253 AOX1Q06278 1338 aa9.99□□□□□ -0.81
PCM1-212ENST00000519253 RIOK3O14730 519 aaKnown RBP9.99□□□□□ -0.81
PCM1-212ENST00000519253 ZSCAN12O43309 604 aa9.99□□□□□ -0.81
PCM1-212ENST00000519253 PTGS1P23219 599 aa9.99□□□□□ -0.81
PCM1-212ENST00000519253 WAPLQ7Z5K2 1190 aa9.99□□□□□ -0.81
PCM1-212ENST00000519253 ZSCAN16Q9H4T2 348 aaPredicted RBP9.99□□□□□ -0.81
PCM1-212ENST00000519253 EIF3JO75822 258 aaKnown RBP9.99□□□□□ -0.81
PCM1-212ENST00000519253 AK2P54819 239 aa9.99□□□□□ -0.81
PCM1-212ENST00000519253 SAFBQ15424 915 aaKnown RBP eCLIP9.99□□□□□ -0.81
PCM1-212ENST00000519253 TFIP11Q9UBB9 837 aaKnown RBP9.99□□□□□ -0.81
PCM1-212ENST00000519253 SKILP12757 684 aa9.98□□□□□ -0.81
PCM1-212ENST00000519253 TAF7Q15545 349 aaPredicted RBP9.98□□□□□ -0.81
PCM1-212ENST00000519253 PPP1R42Q7Z4L9 355 aa9.98□□□□□ -0.81
PCM1-212ENST00000519253 HMG20BQ9P0W2 317 aa9.98□□□□□ -0.81
PCM1-212ENST00000519253 LARP6Q9BRS8 491 aaKnown RBP9.98□□□□□ -0.81
PCM1-212ENST00000519253 SSH2Q76I76 1423 aa9.98□□□□□ -0.81
PCM1-212ENST00000519253 NOL10Q9BSC4 688 aaKnown RBP9.98□□□□□ -0.81
PCM1-212ENST00000519253 BCL2L12Q9HB09 334 aa9.98□□□□□ -0.81
PCM1-212ENST00000519253 SNW1Q13573 536 aaKnown RBP9.98□□□□□ -0.81
PCM1-212ENST00000519253 CCDC150Q8NCX0 1101 aa9.98□□□□□ -0.81
PCM1-212ENST00000519253 CCDC9Q9Y3X0 531 aaKnown RBP9.98□□□□□ -0.81
PCM1-212ENST00000519253 SLU7O95391 586 aaKnown RBP9.98□□□□□ -0.81
PCM1-212ENST00000519253 VPS53Q5VIR6 699 aa9.98□□□□□ -0.81
PCM1-212ENST00000519253 MYOM2P54296 1465 aa9.97□□□□□ -0.81
PCM1-212ENST00000519253 CREBRFQ8IUR6 639 aa9.97□□□□□ -0.81
PCM1-212ENST00000519253 TRMT1Q9NXH9 659 aaKnown RBP9.97□□□□□ -0.81
PCM1-212ENST00000519253 HMGB1P09429 215 aaKnown RBP9.97□□□□□ -0.81
PCM1-212ENST00000519253 PIK3R4Q99570 1358 aa9.97□□□□□ -0.81
PCM1-212ENST00000519253 GADD45BO75293 160 aaPredicted RBP9.97□□□□□ -0.81
PCM1-212ENST00000519253 DMTNQ08495 405 aa9.97□□□□□ -0.81
PCM1-212ENST00000519253 DNAAF4Q8WXU2 420 aa9.97□□□□□ -0.81
PCM1-212ENST00000519253 TRPM2O94759 1503 aa9.97□□□□□ -0.81
PCM1-212ENST00000519253 DDX11Q96FC9 970 aa9.97□□□□□ -0.81
PCM1-212ENST00000519253 PLEKHO1Q53GL0 409 aaPredicted RBP9.97□□□□□ -0.81
PCM1-212ENST00000519253 DNAJC2Q99543 621 aaKnown RBP9.97□□□□□ -0.81
PCM1-212ENST00000519253 DACH1Q9UI36 760 aa9.97□□□□□ -0.81
PCM1-212ENST00000519253 LAMC1P11047 1609 aa9.96□□□□□ -0.81
PCM1-212ENST00000519253 PLXNC1O60486 1568 aa9.96□□□□□ -0.81
PCM1-212ENST00000519253 MSH6P52701 1360 aa9.96□□□□□ -0.81
PCM1-212ENST00000519253 CUL4AQ13619 759 aa9.96□□□□□ -0.81
PCM1-212ENST00000519253 FBLN1P23142 703 aa9.96□□□□□ -0.81
PCM1-212ENST00000519253 AKAP17AQ02040 695 aaKnown RBP9.96□□□□□ -0.81
PCM1-212ENST00000519253 NEUROD6Q96NK8 337 aa9.96□□□□□ -0.81
PCM1-212ENST00000519253 SOS1Q07889 1333 aaPredicted RBP9.96□□□□□ -0.81
PCM1-212ENST00000519253 TTC41PQ6P2S7 1318 aa9.96□□□□□ -0.81
PCM1-212ENST00000519253 AIMP1Q12904 312 aaKnown RBP9.96□□□□□ -0.82
PCM1-212ENST00000519253 TTC5Q8N0Z6 440 aa9.96□□□□□ -0.82
PCM1-212ENST00000519253 OSBPL3Q9H4L5 887 aa9.96□□□□□ -0.82
PCM1-212ENST00000519253 CHL1O00533 1208 aa9.96□□□□□ -0.82
PCM1-212ENST00000519253 ABCA8O94911 1581 aa9.96□□□□□ -0.82
PCM1-212ENST00000519253 CSB-PGBD3P0DP91 1061 aa9.95□□□□□ -0.82
PCM1-212ENST00000519253 HSPA4P34932 840 aa9.95□□□□□ -0.82
PCM1-212ENST00000519253 IL13P35225 146 aa9.95□□□□□ -0.82
PCM1-212ENST00000519253 TOMM22Q9NS69 142 aa9.95□□□□□ -0.82
PCM1-212ENST00000519253 RIMS2Q9UQ26 1411 aa9.95□□□□□ -0.82
PCM1-212ENST00000519253 URI1O94763 535 aaPredicted RBP9.95□□□□□ -0.82
PCM1-212ENST00000519253 C17orf53Q8N3J3 647 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms