RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 CCDC30Q5VVM6 783 aa13.54□□□□□ -0.24
PABPC1-203ENST00000517921 ZKSCAN2Q63HK3 967 aa13.54□□□□□ -0.24
PABPC1-203ENST00000517921 ACSBG1Q96GR2 724 aa13.54□□□□□ -0.24
PABPC1-203ENST00000517921 NOB1Q9ULX3 412 aaKnown RBP13.54□□□□□ -0.24
PABPC1-203ENST00000517921 AFDNP55196 1824 aaKnown RBP13.53□□□□□ -0.24
PABPC1-203ENST00000517921 TRIM27P14373 513 aa13.53□□□□□ -0.24
PABPC1-203ENST00000517921 PDE3AQ14432 1141 aa13.53□□□□□ -0.24
PABPC1-203ENST00000517921 ATF7IPQ6VMQ6 1270 aa13.53□□□□□ -0.24
PABPC1-203ENST00000517921 NECTIN2Q92692 538 aa13.53□□□□□ -0.24
PABPC1-203ENST00000517921 SYTL4Q96C24 671 aaPredicted RBP13.53□□□□□ -0.24
PABPC1-203ENST00000517921 ATG3Q9NT62 314 aa13.53□□□□□ -0.24
PABPC1-203ENST00000517921 ASAP1Q9ULH1 1129 aa13.53□□□□□ -0.24
PABPC1-203ENST00000517921 TRIM37O94972 964 aa13.52□□□□□ -0.25
PABPC1-203ENST00000517921 SNRPA1P09661 255 aaKnown RBP13.52□□□□□ -0.25
PABPC1-203ENST00000517921 RLBP1P12271 317 aa13.52□□□□□ -0.25
PABPC1-203ENST00000517921 EIF2S2P20042 333 aaKnown RBP13.52□□□□□ -0.25
PABPC1-203ENST00000517921 ERICH6BQ5W0A0 696 aa13.52□□□□□ -0.25
PABPC1-203ENST00000517921 CRBNQ96SW2 442 aa13.52□□□□□ -0.25
PABPC1-203ENST00000517921 STK31Q9BXU1 1019 aa13.52□□□□□ -0.25
PABPC1-203ENST00000517921 TNS1Q9HBL0 1735 aaKnown RBP13.52□□□□□ -0.25
PABPC1-203ENST00000517921 IPO8O15397 1037 aaKnown RBP13.51□□□□□ -0.25
PABPC1-203ENST00000517921 SLC4A2P04920 1241 aa13.51□□□□□ -0.25
PABPC1-203ENST00000517921 EN1Q05925 392 aaPredicted RBP13.51□□□□□ -0.25
PABPC1-203ENST00000517921 EXOC6Q8TAG9 804 aa13.51□□□□□ -0.25
PABPC1-203ENST00000517921 PANK1Q8TE04 598 aa13.51□□□□□ -0.25
PABPC1-203ENST00000517921 ARHGAP45Q92619 1136 aa13.51□□□□□ -0.25
PABPC1-203ENST00000517921 CHMP4AQ9BY43 222 aa13.51□□□□□ -0.25
PABPC1-203ENST00000517921 CHPF2Q9P2E5 772 aa13.51□□□□□ -0.25
PABPC1-203ENST00000517921 ABCC4O15439 1325 aa13.5□□□□□ -0.25
PABPC1-203ENST00000517921 PTPRCP08575 1304 aa13.5□□□□□ -0.25
PABPC1-203ENST00000517921 KCNQ2O43526 872 aa13.5□□□□□ -0.25
PABPC1-203ENST00000517921 PTCD1O75127 700 aaKnown RBP13.5□□□□□ -0.25
PABPC1-203ENST00000517921 APBA3O96018 575 aa13.5□□□□□ -0.25
PABPC1-203ENST00000517921 G2E3Q7L622 706 aa13.5□□□□□ -0.25
PABPC1-203ENST00000517921 PXDNLA1KZ92 1463 aa13.49□□□□□ -0.25
PABPC1-203ENST00000517921 PROSER3Q2NL68 480 aa13.49□□□□□ -0.25
PABPC1-203ENST00000517921 FTSJ3Q8IY81 847 aaKnown RBP13.49□□□□□ -0.25
PABPC1-203ENST00000517921 DZIP1LQ8IYY4 767 aaKnown RBP13.49□□□□□ -0.25
PABPC1-203ENST00000517921 VSIG10Q8N0Z9 540 aa13.49□□□□□ -0.25
PABPC1-203ENST00000517921 CLUAP1Q96AJ1 413 aa13.49□□□□□ -0.25
PABPC1-203ENST00000517921 DBF4Q9UBU7 674 aaPredicted RBP13.49□□□□□ -0.25
PABPC1-203ENST00000517921 USP16Q9Y5T5 823 aa13.49□□□□□ -0.25
PABPC1-203ENST00000517921 ANKRD36CQ5JPF3 1778 aa13.49□□□□□ -0.25
PABPC1-203ENST00000517921 NUP98P52948 1817 aa13.48□□□□□ -0.25
PABPC1-203ENST00000517921 PALLDQ8WX93 1383 aa13.48□□□□□ -0.25
PABPC1-203ENST00000517921 ANXA1P04083 346 aa13.48□□□□□ -0.25
PABPC1-203ENST00000517921 MS4A1P11836 297 aa13.48□□□□□ -0.25
PABPC1-203ENST00000517921 FLIIQ13045 1269 aa13.48□□□□□ -0.25
PABPC1-203ENST00000517921 SLC4A9Q96Q91 983 aa13.48□□□□□ -0.25
PABPC1-203ENST00000517921 API5Q9BZZ5 524 aaKnown RBP13.48□□□□□ -0.25
PABPC1-203ENST00000517921 RGPD3A6NKT7 1758 aaPredicted RBP13.48□□□□□ -0.25
PABPC1-203ENST00000517921 RGPD4Q7Z3J3 1758 aa13.48□□□□□ -0.25
PABPC1-203ENST00000517921 ERBB4Q15303 1308 aa13.47□□□□□ -0.25
PABPC1-203ENST00000517921 PDIA6Q15084 440 aa13.47□□□□□ -0.25
PABPC1-203ENST00000517921 PTF1AQ7RTS3 328 aa13.47□□□□□ -0.25
PABPC1-203ENST00000517921 PHAXQ9H814 394 aaKnown RBP13.47□□□□□ -0.25
PABPC1-203ENST00000517921 DDX21Q9NR30 783 aaKnown RBP eCLIP13.47□□□□□ -0.25
PABPC1-203ENST00000517921 COG6Q9Y2V7 657 aa13.47□□□□□ -0.25
PABPC1-203ENST00000517921 BCORQ6W2J9 1755 aa13.46□□□□□ -0.25
PABPC1-203ENST00000517921 MVPQ14764 893 aaKnown RBP13.46□□□□□ -0.25
PABPC1-203ENST00000517921 EZH2Q15910 746 aaKnown RBP13.46□□□□□ -0.25
PABPC1-203ENST00000517921 LRP10Q7Z4F1 713 aa13.46□□□□□ -0.25
PABPC1-203ENST00000517921 DNAJC10Q8IXB1 793 aa13.46□□□□□ -0.25
PABPC1-203ENST00000517921 TMEM57Q8N5G2 664 aa13.46□□□□□ -0.25
PABPC1-203ENST00000517921 SMARCC1Q92922 1105 aaPredicted RBP13.46□□□□□ -0.25
PABPC1-203ENST00000517921 RBM42Q9BTD8 480 aaKnown RBP13.46□□□□□ -0.25
PABPC1-203ENST00000517921 PSDA5PKW4 1024 aaPredicted RBP13.45□□□□□ -0.26
PABPC1-203ENST00000517921 FKBP5Q13451 457 aaPredicted RBP13.45□□□□□ -0.26
PABPC1-203ENST00000517921 HYPKQ9NX55 129 aa13.45□□□□□ -0.26
PABPC1-203ENST00000517921 LOC102724428A0A0B4J2F2 783 aa13.44□□□□□ -0.26
PABPC1-203ENST00000517921 SIK1P57059 783 aa13.44□□□□□ -0.26
PABPC1-203ENST00000517921 CAMKK2Q96RR4 588 aa13.44□□□□□ -0.26
PABPC1-203ENST00000517921 TEX13AQ9BXU3 409 aaPredicted RBP13.44□□□□□ -0.26
PABPC1-203ENST00000517921 PPP4R2Q9NY27 417 aa13.44□□□□□ -0.26
PABPC1-203ENST00000517921 C4BP0C0L5 1744 aa13.44□□□□□ -0.26
PABPC1-203ENST00000517921 UBR3Q6ZT12 1888 aa13.44□□□□□ -0.26
PABPC1-203ENST00000517921 ADCY9O60503 1353 aa13.44□□□□□ -0.26
PABPC1-203ENST00000517921 NBPF26B4DH59 902 aa13.43□□□□□ -0.26
PABPC1-203ENST00000517921 A1BGP04217 495 aa13.43□□□□□ -0.26
PABPC1-203ENST00000517921 C4AP0C0L4 1744 aa13.43□□□□□ -0.26
PABPC1-203ENST00000517921 PIP4K2AP48426 406 aaPredicted RBP13.43□□□□□ -0.26
PABPC1-203ENST00000517921 NBPF14Q5TI25 921 aa13.43□□□□□ -0.26
PABPC1-203ENST00000517921 INTS3Q68E01 1043 aaKnown RBP13.43□□□□□ -0.26
PABPC1-203ENST00000517921 NBPF10Q6P3W6 841 aaKnown RBP13.43□□□□□ -0.26
PABPC1-203ENST00000517921 ITPRIPQ8IWB1 547 aa13.43□□□□□ -0.26
PABPC1-203ENST00000517921 NBPF15Q8N660 670 aa13.43□□□□□ -0.26
PABPC1-203ENST00000517921 TUBGCP6Q96RT7 1819 aa13.43□□□□□ -0.26
PABPC1-203ENST00000517921 ATP10DQ9P241 1426 aa13.42□□□□□ -0.26
PABPC1-203ENST00000517921 F6X3S4 739 aa13.42□□□□□ -0.26
PABPC1-203ENST00000517921 CYP19A1P11511 503 aaPredicted RBP13.42□□□□□ -0.26
PABPC1-203ENST00000517921 MYL6BP14649 208 aa13.42□□□□□ -0.26
PABPC1-203ENST00000517921 BCL11BQ9C0K0 894 aaPredicted RBP13.42□□□□□ -0.26
PABPC1-203ENST00000517921 DDX19BQ9UMR2 479 aa13.42□□□□□ -0.26
PABPC1-203ENST00000517921 SCN7AQ01118 1682 aa13.42□□□□□ -0.26
PABPC1-203ENST00000517921 STARD3NLO95772 234 aa13.41□□□□□ -0.26
PABPC1-203ENST00000517921 ITPK1Q13572 414 aa13.41□□□□□ -0.26
PABPC1-203ENST00000517921 R3HDM1Q15032 1099 aaKnown RBP13.41□□□□□ -0.26
PABPC1-203ENST00000517921 XAGE3Q8WTP9 111 aa13.41□□□□□ -0.26
PABPC1-203ENST00000517921 PI4KAP2A4QPH2 592 aa13.4□□□□□ -0.26
PABPC1-203ENST00000517921 ATP6V1AP38606 617 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms