RNA–Protein interactions for RNA: ENST00000513511.5

ABCC3-212, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 5

Gene ABCC3, Length 1,042 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-212ENST00000513511 ANP32CO43423 234 aa18.48■□□□□ 0.55
ABCC3-212ENST00000513511 CYP19A1P11511 503 aaPredicted RBP18.48■□□□□ 0.55
ABCC3-212ENST00000513511 DPEP1P16444 411 aa18.48■□□□□ 0.55
ABCC3-212ENST00000513511 TGFB2P61812 414 aa18.48■□□□□ 0.55
ABCC3-212ENST00000513511 ZBTB1Q9Y2K1 713 aa18.48■□□□□ 0.55
ABCC3-212ENST00000513511 USPL1Q5W0Q7 1092 aa18.47■□□□□ 0.55
ABCC3-212ENST00000513511 SOS1Q07889 1333 aaPredicted RBP18.47■□□□□ 0.55
ABCC3-212ENST00000513511 COL15A1P39059 1388 aa18.46■□□□□ 0.55
ABCC3-212ENST00000513511 UBR2Q8IWV8 1755 aa18.46■□□□□ 0.55
ABCC3-212ENST00000513511 CANXP27824 592 aaKnown RBP18.46■□□□□ 0.55
ABCC3-212ENST00000513511 DDR1Q08345 913 aa18.46■□□□□ 0.55
ABCC3-212ENST00000513511 IL17REQ8NFR9 667 aa18.46■□□□□ 0.55
ABCC3-212ENST00000513511 GPBP1L1Q9HC44 474 aaPredicted RBP18.46■□□□□ 0.55
ABCC3-212ENST00000513511 ZNF330Q9Y3S2 320 aaPredicted RBP18.45■□□□□ 0.54
ABCC3-212ENST00000513511 CCDC184Q52MB2 194 aa18.44■□□□□ 0.54
ABCC3-212ENST00000513511 PLEKHF1Q96S99 279 aa18.44■□□□□ 0.54
ABCC3-212ENST00000513511 WDR43Q15061 677 aaKnown RBP eCLIP18.43■□□□□ 0.54
ABCC3-212ENST00000513511 ZNF790Q6PG37 636 aa18.43■□□□□ 0.54
ABCC3-212ENST00000513511 VSIG10Q8N0Z9 540 aa18.43■□□□□ 0.54
ABCC3-212ENST00000513511 ZNF496Q96IT1 587 aaPredicted RBP18.43■□□□□ 0.54
ABCC3-212ENST00000513511 ADCY9O60503 1353 aa18.42■□□□□ 0.54
ABCC3-212ENST00000513511 POLRMTO00411 1230 aaKnown RBP18.42■□□□□ 0.54
ABCC3-212ENST00000513511 STARD3NLO95772 234 aa18.42■□□□□ 0.54
ABCC3-212ENST00000513511 ARHGAP27Q6ZUM4 889 aa18.42■□□□□ 0.54
ABCC3-212ENST00000513511 MAPK8IP3Q9UPT6 1336 aa18.42■□□□□ 0.54
ABCC3-212ENST00000513511 SIPA1L3O60292 1781 aaPredicted RBP18.42■□□□□ 0.54
ABCC3-212ENST00000513511 NEFMP07197 916 aa18.41■□□□□ 0.54
ABCC3-212ENST00000513511 CHRNA5P30532 468 aa18.41■□□□□ 0.54
ABCC3-212ENST00000513511 NARFQ9UHQ1 456 aa18.41■□□□□ 0.54
ABCC3-212ENST00000513511 BRCA1P38398 1863 aaKnown RBP18.41■□□□□ 0.54
ABCC3-212ENST00000513511 HEG1Q9ULI3 1381 aa18.41■□□□□ 0.54
ABCC3-212ENST00000513511 BTBD11A6QL63 1104 aa18.4■□□□□ 0.54
ABCC3-212ENST00000513511 BICDL1Q6ZP65 573 aa18.4■□□□□ 0.54
ABCC3-212ENST00000513511 DLG5Q8TDM6 1919 aa18.39■□□□□ 0.53
ABCC3-212ENST00000513511 KCNA3P22001 575 aa18.39■□□□□ 0.53
ABCC3-212ENST00000513511 TM4SF1P30408 202 aa18.39■□□□□ 0.53
ABCC3-212ENST00000513511 NFIXQ14938 502 aa18.39■□□□□ 0.53
ABCC3-212ENST00000513511 MCM10Q7L590 875 aa18.39■□□□□ 0.53
ABCC3-212ENST00000513511 CCDC146Q8IYE0 955 aa18.39■□□□□ 0.53
ABCC3-212ENST00000513511 RTF1Q92541 710 aaKnown RBP18.39■□□□□ 0.53
ABCC3-212ENST00000513511 FMNL2Q96PY5 1086 aa18.39■□□□□ 0.53
ABCC3-212ENST00000513511 PNNQ9H307 717 aaKnown RBP18.39■□□□□ 0.53
ABCC3-212ENST00000513511 PIM2Q9P1W9 311 aa18.39■□□□□ 0.53
ABCC3-212ENST00000513511 ADAMTS8Q9UP79 889 aa18.39■□□□□ 0.53
ABCC3-212ENST00000513511 CEMIPQ8WUJ3 1361 aa18.39■□□□□ 0.53
ABCC3-212ENST00000513511 KCNQ3O43525 872 aa18.38■□□□□ 0.53
ABCC3-212ENST00000513511 DALRD3Q5D0E6 543 aaKnown RBP18.38■□□□□ 0.53
ABCC3-212ENST00000513511 MRS2Q9HD23 443 aa18.38■□□□□ 0.53
ABCC3-212ENST00000513511 AFDNP55196 1824 aaKnown RBP18.37■□□□□ 0.53
ABCC3-212ENST00000513511 NFE2L2Q16236 605 aa18.37■□□□□ 0.53
ABCC3-212ENST00000513511 NPM2Q86SE8 214 aaKnown RBP18.37■□□□□ 0.53
ABCC3-212ENST00000513511 BCL2L12Q9HB09 334 aa18.37■□□□□ 0.53
ABCC3-212ENST00000513511 SERPINB2P05120 415 aa18.36■□□□□ 0.53
ABCC3-212ENST00000513511 DCTN1Q14203 1278 aa18.36■□□□□ 0.53
ABCC3-212ENST00000513511 TEX13AQ9BXU3 409 aaPredicted RBP18.36■□□□□ 0.53
ABCC3-212ENST00000513511 TBC1D2BQ9UPU7 963 aa18.36■□□□□ 0.53
ABCC3-212ENST00000513511 ARFGEF1Q9Y6D6 1849 aa18.35■□□□□ 0.53
ABCC3-212ENST00000513511 A0A087WZG4 1122 aa18.35■□□□□ 0.53
ABCC3-212ENST00000513511 EIF5P55010 431 aaKnown RBP18.35■□□□□ 0.53
ABCC3-212ENST00000513511 A1BGP04217 495 aa18.34■□□□□ 0.53
ABCC3-212ENST00000513511 PIP4K2AP48426 406 aaPredicted RBP18.34■□□□□ 0.53
ABCC3-212ENST00000513511 SCN7AQ01118 1682 aa18.34■□□□□ 0.53
ABCC3-212ENST00000513511 RUNDC1Q96C34 613 aa18.33■□□□□ 0.52
ABCC3-212ENST00000513511 NRXN2Q9P2S2 1712 aa18.32■□□□□ 0.52
ABCC3-212ENST00000513511 CARMIL3Q8ND23 1372 aa18.32■□□□□ 0.52
ABCC3-212ENST00000513511 PRAMEF22A3QJZ6 481 aa18.32■□□□□ 0.52
ABCC3-212ENST00000513511 HTATSF1O43719 755 aaKnown RBP18.32■□□□□ 0.52
ABCC3-212ENST00000513511 IL6STP40189 918 aaPredicted RBP18.32■□□□□ 0.52
ABCC3-212ENST00000513511 C9orf131Q5VYM1 1079 aa18.32■□□□□ 0.52
ABCC3-212ENST00000513511 TBC1D9BQ66K14 1250 aa18.32■□□□□ 0.52
ABCC3-212ENST00000513511 RRP7AQ9Y3A4 280 aaKnown RBP18.32■□□□□ 0.52
ABCC3-212ENST00000513511 NPHP1O15259 732 aa18.31■□□□□ 0.52
ABCC3-212ENST00000513511 TMPOP42166 694 aaKnown RBP18.31■□□□□ 0.52
ABCC3-212ENST00000513511 CCDC24Q8N4L8 307 aa18.31■□□□□ 0.52
ABCC3-212ENST00000513511 PNISRQ8TF01 805 aaKnown RBP18.31■□□□□ 0.52
ABCC3-212ENST00000513511 THUMPD2Q9BTF0 503 aaKnown RBP18.31■□□□□ 0.52
ABCC3-212ENST00000513511 RIPK4P57078 832 aa18.3■□□□□ 0.52
ABCC3-212ENST00000513511 C2CD5Q86YS7 1000 aa18.3■□□□□ 0.52
ABCC3-212ENST00000513511 USP16Q9Y5T5 823 aa18.3■□□□□ 0.52
ABCC3-212ENST00000513511 NEUROD2Q15784 382 aa18.29■□□□□ 0.52
ABCC3-212ENST00000513511 MIS18AQ9NYP9 233 aa18.29■□□□□ 0.52
ABCC3-212ENST00000513511 RNF181Q9P0P0 153 aa18.29■□□□□ 0.52
ABCC3-212ENST00000513511 H0YIN7 160 aa18.28■□□□□ 0.52
ABCC3-212ENST00000513511 KIF3CO14782 793 aa18.28■□□□□ 0.52
ABCC3-212ENST00000513511 SNRPA1P09661 255 aaKnown RBP18.28■□□□□ 0.52
ABCC3-212ENST00000513511 RASSF7Q02833 373 aa18.28■□□□□ 0.52
ABCC3-212ENST00000513511 DZIP3Q86Y13 1208 aaKnown RBP18.28■□□□□ 0.52
ABCC3-212ENST00000513511 CEP350Q5VT06 3117 aa18.28■□□□□ 0.52
ABCC3-212ENST00000513511 DLEC1Q9Y238 1755 aa18.27■□□□□ 0.52
ABCC3-212ENST00000513511 CAMTA2O94983 1202 aa18.27■□□□□ 0.52
ABCC3-212ENST00000513511 NMRK2Q9NPI5 230 aa18.27■□□□□ 0.52
ABCC3-212ENST00000513511 BCORQ6W2J9 1755 aa18.27■□□□□ 0.51
ABCC3-212ENST00000513511 KDM3BQ7LBC6 1761 aa18.27■□□□□ 0.51
ABCC3-212ENST00000513511 LMOD3Q0VAK6 560 aa18.26■□□□□ 0.51
ABCC3-212ENST00000513511 TAF7Q15545 349 aaPredicted RBP18.26■□□□□ 0.51
ABCC3-212ENST00000513511 PRR5LQ6MZQ0 368 aa18.26■□□□□ 0.51
ABCC3-212ENST00000513511 TTLL6Q8N841 843 aa18.26■□□□□ 0.51
ABCC3-212ENST00000513511 ZNF622Q969S3 477 aaKnown RBP eCLIP18.26■□□□□ 0.51
ABCC3-212ENST00000513511 SETDB2Q96T68 719 aa18.26■□□□□ 0.51
ABCC3-212ENST00000513511 ZNF219Q9P2Y4 722 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms