RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 G2E3Q7L622 706 aa11.97□□□□□ -0.49
DHFR-206ENST00000513048 QTRT2Q9H974 415 aaKnown RBP11.97□□□□□ -0.49
DHFR-206ENST00000513048 TMOD3Q9NYL9 352 aa11.97□□□□□ -0.49
DHFR-206ENST00000513048 ABCC4O15439 1325 aa11.96□□□□□ -0.49
DHFR-206ENST00000513048 IPO8O15397 1037 aaKnown RBP11.96□□□□□ -0.49
DHFR-206ENST00000513048 FMNL2Q96PY5 1086 aa11.96□□□□□ -0.49
DHFR-206ENST00000513048 ATG3Q9NT62 314 aa11.96□□□□□ -0.49
DHFR-206ENST00000513048 CANXP27824 592 aaKnown RBP11.95□□□□□ -0.5
DHFR-206ENST00000513048 PRIM1P49642 420 aaKnown RBP11.95□□□□□ -0.5
DHFR-206ENST00000513048 DZIP1LQ8IYY4 767 aaKnown RBP11.95□□□□□ -0.5
DHFR-206ENST00000513048 TTC5Q8N0Z6 440 aa11.95□□□□□ -0.5
DHFR-206ENST00000513048 NECTIN2Q92692 538 aa11.95□□□□□ -0.5
DHFR-206ENST00000513048 PPP4R2Q9NY27 417 aa11.95□□□□□ -0.5
DHFR-206ENST00000513048 ASAP1Q9ULH1 1129 aa11.95□□□□□ -0.5
DHFR-206ENST00000513048 PTPRCP08575 1304 aa11.94□□□□□ -0.5
DHFR-206ENST00000513048 SNRPA1P09661 255 aaKnown RBP11.94□□□□□ -0.5
DHFR-206ENST00000513048 MS4A1P11836 297 aa11.94□□□□□ -0.5
DHFR-206ENST00000513048 PDIA6Q15084 440 aa11.94□□□□□ -0.5
DHFR-206ENST00000513048 SEPT12Q8IYM1 358 aa11.94□□□□□ -0.5
DHFR-206ENST00000513048 CLUAP1Q96AJ1 413 aa11.94□□□□□ -0.5
DHFR-206ENST00000513048 STK31Q9BXU1 1019 aa11.94□□□□□ -0.5
DHFR-206ENST00000513048 API5Q9BZZ5 524 aaKnown RBP11.94□□□□□ -0.5
DHFR-206ENST00000513048 CHPF2Q9P2E5 772 aa11.94□□□□□ -0.5
DHFR-206ENST00000513048 COG6Q9Y2V7 657 aa11.94□□□□□ -0.5
DHFR-206ENST00000513048 BRWD3Q6RI45 1802 aa11.94□□□□□ -0.5
DHFR-206ENST00000513048 NHSQ6T4R5 1651 aa11.94□□□□□ -0.5
DHFR-206ENST00000513048 CICQ96RK0 1608 aaPredicted RBP11.93□□□□□ -0.5
DHFR-206ENST00000513048 SBF2Q86WG5 1849 aa11.93□□□□□ -0.5
DHFR-206ENST00000513048 N4BP2Q86UW6 1770 aaPredicted RBP11.93□□□□□ -0.5
DHFR-206ENST00000513048 EIF2S2P20042 333 aaKnown RBP11.93□□□□□ -0.5
DHFR-206ENST00000513048 MVPQ14764 893 aaKnown RBP11.93□□□□□ -0.5
DHFR-206ENST00000513048 PROSER3Q2NL68 480 aa11.93□□□□□ -0.5
DHFR-206ENST00000513048 ZNF772Q68DY9 489 aaPredicted RBP11.93□□□□□ -0.5
DHFR-206ENST00000513048 LRP10Q7Z4F1 713 aa11.93□□□□□ -0.5
DHFR-206ENST00000513048 TMEM57Q8N5G2 664 aa11.93□□□□□ -0.5
DHFR-206ENST00000513048 CHMP4AQ9BY43 222 aa11.93□□□□□ -0.5
DHFR-206ENST00000513048 RGS17Q9UGC6 210 aaPredicted RBP11.93□□□□□ -0.5
DHFR-206ENST00000513048 USP16Q9Y5T5 823 aa11.93□□□□□ -0.5
DHFR-206ENST00000513048 TJP1Q07157 1748 aa11.93□□□□□ -0.5
DHFR-206ENST00000513048 KAT6BQ8WYB5 2073 aa11.93□□□□□ -0.5
DHFR-206ENST00000513048 FLIIQ13045 1269 aa11.92□□□□□ -0.5
DHFR-206ENST00000513048 ACSBG1Q96GR2 724 aa11.92□□□□□ -0.5
DHFR-206ENST00000513048 SLC4A9Q96Q91 983 aa11.92□□□□□ -0.5
DHFR-206ENST00000513048 PHAXQ9H814 394 aaKnown RBP11.92□□□□□ -0.5
DHFR-206ENST00000513048 DBF4Q9UBU7 674 aaPredicted RBP11.92□□□□□ -0.5
DHFR-206ENST00000513048 KCNQ2O43526 872 aa11.91□□□□□ -0.5
DHFR-206ENST00000513048 PTCD1O75127 700 aaKnown RBP11.91□□□□□ -0.5
DHFR-206ENST00000513048 ANXA1P04083 346 aa11.91□□□□□ -0.5
DHFR-206ENST00000513048 RBM6P78332 1123 aaKnown RBP11.91□□□□□ -0.5
DHFR-206ENST00000513048 FTSJ3Q8IY81 847 aaKnown RBP11.91□□□□□ -0.5
DHFR-206ENST00000513048 VSIG10Q8N0Z9 540 aa11.91□□□□□ -0.5
DHFR-206ENST00000513048 DDX21Q9NR30 783 aaKnown RBP eCLIP11.91□□□□□ -0.5
DHFR-206ENST00000513048 ZNF831Q5JPB2 1677 aa11.91□□□□□ -0.5
DHFR-206ENST00000513048 ERBB4Q15303 1308 aa11.9□□□□□ -0.5
DHFR-206ENST00000513048 A0A0G2JS52 829 aa11.9□□□□□ -0.5
DHFR-206ENST00000513048 NBPF26B4DH59 902 aa11.9□□□□□ -0.5
DHFR-206ENST00000513048 MYT1Q01538 1121 aa11.9□□□□□ -0.5
DHFR-206ENST00000513048 NBPF14Q5TI25 921 aa11.9□□□□□ -0.5
DHFR-206ENST00000513048 INTS3Q68E01 1043 aaKnown RBP11.9□□□□□ -0.5
DHFR-206ENST00000513048 NBPF10Q6P3W6 841 aaKnown RBP11.9□□□□□ -0.5
DHFR-206ENST00000513048 PTF1AQ7RTS3 328 aa11.9□□□□□ -0.5
DHFR-206ENST00000513048 NBPF15Q8N660 670 aa11.9□□□□□ -0.5
DHFR-206ENST00000513048 SYTL4Q96C24 671 aaPredicted RBP11.9□□□□□ -0.5
DHFR-206ENST00000513048 BTAF1O14981 1849 aa11.9□□□□□ -0.5
DHFR-206ENST00000513048 PXDNLA1KZ92 1463 aa11.89□□□□□ -0.51
DHFR-206ENST00000513048 FAM182BQ5T319 152 aa11.89□□□□□ -0.51
DHFR-206ENST00000513048 B4GALNT3Q6L9W6 998 aa11.89□□□□□ -0.51
DHFR-206ENST00000513048 DNAJC10Q8IXB1 793 aa11.89□□□□□ -0.51
DHFR-206ENST00000513048 HYPKQ9NX55 129 aa11.89□□□□□ -0.51
DHFR-206ENST00000513048 ADCY9O60503 1353 aa11.89□□□□□ -0.51
DHFR-206ENST00000513048 RREB1Q92766 1687 aa11.88□□□□□ -0.51
DHFR-206ENST00000513048 F6X3S4 739 aa11.88□□□□□ -0.51
DHFR-206ENST00000513048 ZBTB7BO15156 539 aaPredicted RBP11.88□□□□□ -0.51
DHFR-206ENST00000513048 AAMPQ13685 434 aa11.88□□□□□ -0.51
DHFR-206ENST00000513048 DDX19BQ9UMR2 479 aa11.88□□□□□ -0.51
DHFR-206ENST00000513048 FKBP5Q13451 457 aaPredicted RBP11.87□□□□□ -0.51
DHFR-206ENST00000513048 ITPRIPQ8IWB1 547 aa11.87□□□□□ -0.51
DHFR-206ENST00000513048 TEX13AQ9BXU3 409 aaPredicted RBP11.87□□□□□ -0.51
DHFR-206ENST00000513048 ZBTB40Q9NUA8 1239 aa11.87□□□□□ -0.51
DHFR-206ENST00000513048 PALLDQ8WX93 1383 aa11.87□□□□□ -0.51
DHFR-206ENST00000513048 COL5A3P25940 1745 aaPredicted RBP11.86□□□□□ -0.51
DHFR-206ENST00000513048 A1BGP04217 495 aa11.86□□□□□ -0.51
DHFR-206ENST00000513048 CYP19A1P11511 503 aaPredicted RBP11.86□□□□□ -0.51
DHFR-206ENST00000513048 PIP4K2AP48426 406 aaPredicted RBP11.86□□□□□ -0.51
DHFR-206ENST00000513048 POTEAQ6S8J7 498 aa11.86□□□□□ -0.51
DHFR-206ENST00000513048 KRT27Q7Z3Y8 459 aa11.86□□□□□ -0.51
DHFR-206ENST00000513048 REM2Q8IYK8 340 aaPredicted RBP11.86□□□□□ -0.51
DHFR-206ENST00000513048 SMARCC1Q92922 1105 aaPredicted RBP11.86□□□□□ -0.51
DHFR-206ENST00000513048 PCDHB15Q9Y5E8 787 aa11.86□□□□□ -0.51
DHFR-206ENST00000513048 LY75O60449 1722 aa11.86□□□□□ -0.51
DHFR-206ENST00000513048 ATP10DQ9P241 1426 aa11.86□□□□□ -0.51
DHFR-206ENST00000513048 LOC102724428A0A0B4J2F2 783 aa11.85□□□□□ -0.51
DHFR-206ENST00000513048 PI4KAP2A4QPH2 592 aa11.85□□□□□ -0.51
DHFR-206ENST00000513048 MYL6BP14649 208 aa11.85□□□□□ -0.51
DHFR-206ENST00000513048 CCT4P50991 539 aaKnown RBP11.85□□□□□ -0.51
DHFR-206ENST00000513048 SIK1P57059 783 aa11.85□□□□□ -0.51
DHFR-206ENST00000513048 ITPK1Q13572 414 aa11.85□□□□□ -0.51
DHFR-206ENST00000513048 KSR2Q6VAB6 950 aa11.85□□□□□ -0.51
DHFR-206ENST00000513048 PI4KAP1Q8N8J0 262 aa11.85□□□□□ -0.51
DHFR-206ENST00000513048 XAGE3Q8WTP9 111 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms