RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 ERVK-9P63128 1117 aa10.77□□□□□ -0.69
RFC1-213ENST00000512275 VASH1Q7L8A9 365 aaPredicted RBP10.77□□□□□ -0.69
RFC1-213ENST00000512275 RBM19Q9Y4C8 960 aaKnown RBP10.77□□□□□ -0.69
RFC1-213ENST00000512275 CASKIN1Q8WXD9 1431 aa10.76□□□□□ -0.69
RFC1-213ENST00000512275 RAB15P59190 212 aa10.76□□□□□ -0.69
RFC1-213ENST00000512275 AMOTL2Q9Y2J4 779 aa10.76□□□□□ -0.69
RFC1-213ENST00000512275 TIAM1Q13009 1591 aa10.75□□□□□ -0.69
RFC1-213ENST00000512275 MYCP01106 439 aaPredicted RBP10.75□□□□□ -0.69
RFC1-213ENST00000512275 PPARGC1BQ86YN6 1023 aaKnown RBP10.75□□□□□ -0.69
RFC1-213ENST00000512275 PRIMPOLQ96LW4 560 aa10.75□□□□□ -0.69
RFC1-213ENST00000512275 C11orf95C9JLR9 678 aaPredicted RBP10.74□□□□□ -0.69
RFC1-213ENST00000512275 WEE1P30291 646 aa10.74□□□□□ -0.69
RFC1-213ENST00000512275 MPNDQ8N594 471 aa10.74□□□□□ -0.69
RFC1-213ENST00000512275 ZNF428Q96B54 188 aa10.74□□□□□ -0.69
RFC1-213ENST00000512275 ABCA8O94911 1581 aa10.73□□□□□ -0.69
RFC1-213ENST00000512275 GRM5P41594 1212 aa10.73□□□□□ -0.69
RFC1-213ENST00000512275 LCE2AQ5TA79 106 aaPredicted RBP10.73□□□□□ -0.69
RFC1-213ENST00000512275 TSEN2Q8NCE0 465 aaKnown RBP10.73□□□□□ -0.69
RFC1-213ENST00000512275 EHBP1Q8NDI1 1231 aa10.73□□□□□ -0.69
RFC1-213ENST00000512275 HPS1Q92902 700 aa10.73□□□□□ -0.69
RFC1-213ENST00000512275 EGFL7Q9UHF1 273 aa10.73□□□□□ -0.69
RFC1-213ENST00000512275 PLB1Q6P1J6 1458 aa10.73□□□□□ -0.69
RFC1-213ENST00000512275 TMEM229AB2RXF0 380 aa10.72□□□□□ -0.69
RFC1-213ENST00000512275 WASLO00401 505 aaPredicted RBP10.72□□□□□ -0.69
RFC1-213ENST00000512275 SCNN1DP51172 638 aa10.72□□□□□ -0.69
RFC1-213ENST00000512275 CC2D2BQ6DHV5 1058 aa10.72□□□□□ -0.69
RFC1-213ENST00000512275 OSBPL3Q9H4L5 887 aa10.72□□□□□ -0.69
RFC1-213ENST00000512275 ZNF358Q9NW07 568 aa10.72□□□□□ -0.69
RFC1-213ENST00000512275 SIAH2O43255 324 aa10.71□□□□□ -0.69
RFC1-213ENST00000512275 PTPRGP23470 1445 aa10.71□□□□□ -0.69
RFC1-213ENST00000512275 FSHRP23945 695 aa10.71□□□□□ -0.69
RFC1-213ENST00000512275 CDK13Q14004 1512 aaKnown RBP10.71□□□□□ -0.69
RFC1-213ENST00000512275 DNAJC14Q6Y2X3 702 aaPredicted RBP10.71□□□□□ -0.69
RFC1-213ENST00000512275 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.71□□□□□ -0.69
RFC1-213ENST00000512275 ATP13A2Q9NQ11 1180 aa10.71□□□□□ -0.69
RFC1-213ENST00000512275 RIMBP3CA6NJZ7 1639 aa10.7□□□□□ -0.7
RFC1-213ENST00000512275 RIMBP3BA6NNM3 1639 aa10.7□□□□□ -0.7
RFC1-213ENST00000512275 RIMBP3Q9UFD9 1639 aa10.7□□□□□ -0.7
RFC1-213ENST00000512275 NUP153P49790 1475 aaKnown RBP10.7□□□□□ -0.7
RFC1-213ENST00000512275 ALDH1A1P00352 501 aa10.7□□□□□ -0.7
RFC1-213ENST00000512275 TREML4Q6UXN2 200 aa10.7□□□□□ -0.7
RFC1-213ENST00000512275 TLL2Q9Y6L7 1015 aa10.7□□□□□ -0.7
RFC1-213ENST00000512275 ARHGEF11O15085 1522 aa10.69□□□□□ -0.7
RFC1-213ENST00000512275 LGR5O75473 907 aa10.69□□□□□ -0.7
RFC1-213ENST00000512275 DHX9Q08211 1270 aaKnown RBP10.69□□□□□ -0.7
RFC1-213ENST00000512275 HINFPQ9BQA5 517 aa10.69□□□□□ -0.7
RFC1-213ENST00000512275 TMPRSS4Q9NRS4 437 aa10.69□□□□□ -0.7
RFC1-213ENST00000512275 EPRSP07814 1512 aaKnown RBP10.68□□□□□ -0.7
RFC1-213ENST00000512275 MAP3K1Q13233 1512 aa10.68□□□□□ -0.7
RFC1-213ENST00000512275 CCDC18Q5T9S5 1454 aa10.68□□□□□ -0.7
RFC1-213ENST00000512275 LILRA1O75019 489 aa10.68□□□□□ -0.7
RFC1-213ENST00000512275 ADH1CP00326 375 aa10.68□□□□□ -0.7
RFC1-213ENST00000512275 RBM25P49756 843 aaKnown RBP10.68□□□□□ -0.7
RFC1-213ENST00000512275 FKBP5Q13451 457 aaPredicted RBP10.68□□□□□ -0.7
RFC1-213ENST00000512275 NOM1Q5C9Z4 860 aaKnown RBP10.68□□□□□ -0.7
RFC1-213ENST00000512275 ZNF784Q8NCA9 323 aaPredicted RBP10.68□□□□□ -0.7
RFC1-213ENST00000512275 CYLDQ9NQC7 956 aa10.68□□□□□ -0.7
RFC1-213ENST00000512275 ABCC2Q92887 1545 aa10.68□□□□□ -0.7
RFC1-213ENST00000512275 EPHA4P54764 986 aa10.67□□□□□ -0.7
RFC1-213ENST00000512275 GDF10P55107 478 aa10.67□□□□□ -0.7
RFC1-213ENST00000512275 ARID5BQ14865 1188 aa10.67□□□□□ -0.7
RFC1-213ENST00000512275 PURBQ96QR8 312 aaKnown RBP10.67□□□□□ -0.7
RFC1-213ENST00000512275 UACAQ9BZF9 1416 aa10.67□□□□□ -0.7
RFC1-213ENST00000512275 ADCY10Q96PN6 1610 aa10.66□□□□□ -0.7
RFC1-213ENST00000512275 IGFBP4P22692 258 aa10.66□□□□□ -0.7
RFC1-213ENST00000512275 COL26A1Q96A83 441 aa10.66□□□□□ -0.7
RFC1-213ENST00000512275 SEPT3Q9UH03 358 aa10.66□□□□□ -0.7
RFC1-213ENST00000512275 MAGI3Q5TCQ9 1506 aa10.66□□□□□ -0.7
RFC1-213ENST00000512275 ZCCHC11Q5TAX3 1644 aaKnown RBP10.66□□□□□ -0.7
RFC1-213ENST00000512275 ICMTO60725 284 aa10.65□□□□□ -0.7
RFC1-213ENST00000512275 STAU1O95793 577 aaKnown RBP10.65□□□□□ -0.7
RFC1-213ENST00000512275 SNRPBP14678 240 aaKnown RBP10.65□□□□□ -0.7
RFC1-213ENST00000512275 ERCC3P19447 782 aa10.65□□□□□ -0.7
RFC1-213ENST00000512275 ZNF211Q13398 564 aaPredicted RBP10.65□□□□□ -0.7
RFC1-213ENST00000512275 PPP1R26Q5T8A7 1209 aaPredicted RBP10.65□□□□□ -0.7
RFC1-213ENST00000512275 CCDC116Q8IYX3 515 aa10.65□□□□□ -0.7
RFC1-213ENST00000512275 TRIM52Q96A61 297 aa10.65□□□□□ -0.7
RFC1-213ENST00000512275 LRRC9Q6ZRR7 1453 aa10.65□□□□□ -0.7
RFC1-213ENST00000512275 EHBP1L1Q8N3D4 1523 aa10.64□□□□□ -0.71
RFC1-213ENST00000512275 INHAP05111 366 aa10.64□□□□□ -0.71
RFC1-213ENST00000512275 NR5A1Q13285 461 aa10.64□□□□□ -0.71
RFC1-213ENST00000512275 ECM1Q16610 540 aa10.64□□□□□ -0.71
RFC1-213ENST00000512275 CAPN12Q6ZSI9 719 aa10.64□□□□□ -0.71
RFC1-213ENST00000512275 GTF3C2Q8WUA4 911 aaPredicted RBP10.64□□□□□ -0.71
RFC1-213ENST00000512275 TRIM47Q96LD4 638 aa10.64□□□□□ -0.71
RFC1-213ENST00000512275 SLC4A9Q96Q91 983 aa10.64□□□□□ -0.71
RFC1-213ENST00000512275 ETNK1Q9HBU6 452 aa10.64□□□□□ -0.71
RFC1-213ENST00000512275 SUPT6HQ7KZ85 1726 aaKnown RBP10.64□□□□□ -0.71
RFC1-213ENST00000512275 H3BRB1 525 aa10.63□□□□□ -0.71
RFC1-213ENST00000512275 FOXO3O43524 673 aa10.63□□□□□ -0.71
RFC1-213ENST00000512275 PTCD1O75127 700 aaKnown RBP10.63□□□□□ -0.71
RFC1-213ENST00000512275 ABL1P00519 1130 aa10.63□□□□□ -0.71
RFC1-213ENST00000512275 NR3C2P08235 984 aa10.63□□□□□ -0.71
RFC1-213ENST00000512275 MKNK1Q9BUB5 465 aa10.63□□□□□ -0.71
RFC1-213ENST00000512275 ESF1Q9H501 851 aaKnown RBP10.63□□□□□ -0.71
RFC1-213ENST00000512275 TUT1Q9H6E5 874 aaKnown RBP10.63□□□□□ -0.71
RFC1-213ENST00000512275 SENP2Q9HC62 589 aa10.63□□□□□ -0.71
RFC1-213ENST00000512275 DNMT3AQ9Y6K1 912 aaPredicted RBP10.63□□□□□ -0.71
RFC1-213ENST00000512275 RBM47A0AV96 593 aaKnown RBP10.62□□□□□ -0.71
RFC1-213ENST00000512275 BACH1O14867 736 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms