RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 HSP90AB2PQ58FF8 381 aa10.98□□□□□ -0.65
SNF8-210ENST00000511214 CYB5RLQ6IPT4 315 aa10.98□□□□□ -0.65
SNF8-210ENST00000511214 SLC4A10Q6U841 1118 aa10.98□□□□□ -0.65
SNF8-210ENST00000511214 PRIMPOLQ96LW4 560 aa10.98□□□□□ -0.65
SNF8-210ENST00000511214 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.98□□□□□ -0.65
SNF8-210ENST00000511214 RAD50Q92878 1312 aa10.98□□□□□ -0.65
SNF8-210ENST00000511214 USP42Q9H9J4 1324 aaKnown RBP10.98□□□□□ -0.65
SNF8-210ENST00000511214 RPAP1Q9BWH6 1393 aaPredicted RBP10.98□□□□□ -0.65
SNF8-210ENST00000511214 ROBO2Q9HCK4 1378 aa10.98□□□□□ -0.65
SNF8-210ENST00000511214 RIMS1Q86UR5 1692 aaKnown RBP10.98□□□□□ -0.65
SNF8-210ENST00000511214 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.98□□□□□ -0.65
SNF8-210ENST00000511214 XPCQ01831 940 aaPredicted RBP10.97□□□□□ -0.65
SNF8-210ENST00000511214 POLA2Q14181 598 aa10.97□□□□□ -0.65
SNF8-210ENST00000511214 HSP90AB4PQ58FF6 505 aa10.97□□□□□ -0.65
SNF8-210ENST00000511214 PALD1Q9ULE6 856 aa10.97□□□□□ -0.65
SNF8-210ENST00000511214 NSFL1CQ9UNZ2 370 aaKnown RBP10.97□□□□□ -0.65
SNF8-210ENST00000511214 EXOC6BQ9Y2D4 811 aa10.97□□□□□ -0.65
SNF8-210ENST00000511214 TNRQ92752 1358 aa10.97□□□□□ -0.65
SNF8-210ENST00000511214 MAP3K5Q99683 1374 aa10.97□□□□□ -0.65
SNF8-210ENST00000511214 DIP2AQ14689 1571 aa10.97□□□□□ -0.65
SNF8-210ENST00000511214 CRYBG1Q9Y4K1 1723 aa10.97□□□□□ -0.65
SNF8-210ENST00000511214 UBR1Q8IWV7 1749 aa10.96□□□□□ -0.65
SNF8-210ENST00000511214 NCKAP5LQ9HCH0 1330 aa10.96□□□□□ -0.65
SNF8-210ENST00000511214 TRIM6-TRIM34B2RNG4 842 aa10.96□□□□□ -0.65
SNF8-210ENST00000511214 F6X3S4 739 aa10.96□□□□□ -0.65
SNF8-210ENST00000511214 SGSM2O43147 1006 aa10.96□□□□□ -0.65
SNF8-210ENST00000511214 PTMAP06454 111 aaKnown RBP10.96□□□□□ -0.65
SNF8-210ENST00000511214 HOXB7P09629 217 aa10.96□□□□□ -0.65
SNF8-210ENST00000511214 UBE2HP62256 183 aa10.96□□□□□ -0.65
SNF8-210ENST00000511214 RILPL2Q969X0 211 aa10.96□□□□□ -0.65
SNF8-210ENST00000511214 PKNOX2Q96KN3 472 aa10.96□□□□□ -0.65
SNF8-210ENST00000511214 TTC14Q96N46 770 aa10.96□□□□□ -0.65
SNF8-210ENST00000511214 ZMYND15Q9H091 742 aa10.96□□□□□ -0.65
SNF8-210ENST00000511214 TTC41PQ6P2S7 1318 aa10.95□□□□□ -0.66
SNF8-210ENST00000511214 PNMA6EA0A0J9YXQ4 647 aa10.95□□□□□ -0.66
SNF8-210ENST00000511214 GNAT3A8MTJ3 354 aa10.95□□□□□ -0.66
SNF8-210ENST00000511214 UBTFL1P0CB47 393 aaPredicted RBP10.95□□□□□ -0.66
SNF8-210ENST00000511214 ZSCAN22P10073 491 aaPredicted RBP10.95□□□□□ -0.66
SNF8-210ENST00000511214 FKBP5Q13451 457 aaPredicted RBP10.95□□□□□ -0.66
SNF8-210ENST00000511214 USP48Q86UV5 1035 aa10.95□□□□□ -0.66
SNF8-210ENST00000511214 CNTROBQ8N137 903 aa10.95□□□□□ -0.66
SNF8-210ENST00000511214 PIBF1Q8WXW3 757 aa10.95□□□□□ -0.66
SNF8-210ENST00000511214 KIF1BPQ96EK5 621 aa10.95□□□□□ -0.66
SNF8-210ENST00000511214 ZSCAN31Q96LW9 406 aaPredicted RBP10.95□□□□□ -0.66
SNF8-210ENST00000511214 TM6SF1Q9BZW5 370 aa10.95□□□□□ -0.66
SNF8-210ENST00000511214 GTF2F1P35269 517 aaKnown RBP eCLIP10.94□□□□□ -0.66
SNF8-210ENST00000511214 MYRIPQ8NFW9 859 aa10.94□□□□□ -0.66
SNF8-210ENST00000511214 RUFY2Q8WXA3 655 aa10.94□□□□□ -0.66
SNF8-210ENST00000511214 KCNB2Q92953 911 aa10.94□□□□□ -0.66
SNF8-210ENST00000511214 USP44Q9H0E7 712 aa10.94□□□□□ -0.66
SNF8-210ENST00000511214 SH2B1Q9NRF2 756 aaPredicted RBP10.94□□□□□ -0.66
SNF8-210ENST00000511214 SPTLC3Q9NUV7 552 aa10.94□□□□□ -0.66
SNF8-210ENST00000511214 LIMCH1Q9UPQ0 1083 aa10.94□□□□□ -0.66
SNF8-210ENST00000511214 HDAC5Q9UQL6 1122 aa10.94□□□□□ -0.66
SNF8-210ENST00000511214 LRRFIP2Q9Y608 721 aaKnown RBP10.94□□□□□ -0.66
SNF8-210ENST00000511214 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.94□□□□□ -0.66
SNF8-210ENST00000511214 ANKARQ7Z5J8 1434 aa10.93□□□□□ -0.66
SNF8-210ENST00000511214 TAF7Q15545 349 aaPredicted RBP10.93□□□□□ -0.66
SNF8-210ENST00000511214 PI4K2BQ8TCG2 481 aa10.93□□□□□ -0.66
SNF8-210ENST00000511214 RHPN1Q8TCX5 695 aa10.93□□□□□ -0.66
SNF8-210ENST00000511214 EYA1Q99502 592 aa10.93□□□□□ -0.66
SNF8-210ENST00000511214 LSG1Q9H089 658 aaKnown RBP10.93□□□□□ -0.66
SNF8-210ENST00000511214 ESF1Q9H501 851 aaKnown RBP10.93□□□□□ -0.66
SNF8-210ENST00000511214 SNX14Q9Y5W7 946 aa10.93□□□□□ -0.66
SNF8-210ENST00000511214 CEP170BQ9Y4F5 1589 aaPredicted RBP10.93□□□□□ -0.66
SNF8-210ENST00000511214 NWD1Q149M9 1564 aa10.92□□□□□ -0.66
SNF8-210ENST00000511214 MED1Q15648 1581 aaPredicted RBP10.92□□□□□ -0.66
SNF8-210ENST00000511214 STX6O43752 255 aa10.92□□□□□ -0.66
SNF8-210ENST00000511214 F13A1P00488 732 aa10.92□□□□□ -0.66
SNF8-210ENST00000511214 VPS53Q5VIR6 699 aa10.92□□□□□ -0.66
SNF8-210ENST00000511214 SMAP1Q8IYB5 467 aaPredicted RBP10.92□□□□□ -0.66
SNF8-210ENST00000511214 RNF214Q8ND24 703 aa10.92□□□□□ -0.66
SNF8-210ENST00000511214 USP25Q9UHP3 1055 aa10.92□□□□□ -0.66
SNF8-210ENST00000511214 CCDC171Q6TFL3 1326 aa10.91□□□□□ -0.66
SNF8-210ENST00000511214 FOXO3O43524 673 aa10.91□□□□□ -0.66
SNF8-210ENST00000511214 KDM4AO75164 1064 aa10.91□□□□□ -0.66
SNF8-210ENST00000511214 GADD45BO75293 160 aaPredicted RBP10.91□□□□□ -0.66
SNF8-210ENST00000511214 GLRX3O76003 335 aaKnown RBP10.91□□□□□ -0.66
SNF8-210ENST00000511214 DSG3P32926 999 aa10.91□□□□□ -0.66
SNF8-210ENST00000511214 AMPHP49418 695 aa10.91□□□□□ -0.66
SNF8-210ENST00000511214 FAM69CQ0P6D2 419 aa10.91□□□□□ -0.66
SNF8-210ENST00000511214 MTX1Q13505 466 aa10.91□□□□□ -0.66
SNF8-210ENST00000511214 FOXD4L5Q5VV16 416 aaPredicted RBP10.91□□□□□ -0.66
SNF8-210ENST00000511214 UNC5CLQ8IV45 518 aa10.91□□□□□ -0.66
SNF8-210ENST00000511214 FOXD4L4Q8WXT5 416 aaPredicted RBP10.91□□□□□ -0.66
SNF8-210ENST00000511214 FUCA2Q9BTY2 467 aa10.91□□□□□ -0.66
SNF8-210ENST00000511214 UPF3BQ9BZI7 483 aaKnown RBP10.91□□□□□ -0.66
SNF8-210ENST00000511214 FAM13BQ9NYF5 915 aa10.91□□□□□ -0.66
SNF8-210ENST00000511214 MIS18AQ9NYP9 233 aa10.91□□□□□ -0.66
SNF8-210ENST00000511214 SMC3Q9UQE7 1217 aa10.91□□□□□ -0.66
SNF8-210ENST00000511214 PIK3C2AO00443 1686 aa10.9□□□□□ -0.66
SNF8-210ENST00000511214 GOLGA6L6A8MZA4 724 aa10.9□□□□□ -0.66
SNF8-210ENST00000511214 HIP1O00291 1037 aa10.9□□□□□ -0.66
SNF8-210ENST00000511214 SURF6O75683 361 aaKnown RBP10.9□□□□□ -0.66
SNF8-210ENST00000511214 SYT1P21579 422 aa10.9□□□□□ -0.66
SNF8-210ENST00000511214 NOLC1Q14978 699 aaKnown RBP eCLIP10.9□□□□□ -0.66
SNF8-210ENST00000511214 TSHZ3Q63HK5 1081 aa10.9□□□□□ -0.66
SNF8-210ENST00000511214 PPP1R42Q7Z4L9 355 aa10.9□□□□□ -0.66
SNF8-210ENST00000511214 ERC1Q8IUD2 1116 aa10.9□□□□□ -0.66
SNF8-210ENST00000511214 CHD2O14647 1828 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms