RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 UBE2HP62256 183 aa17.71■□□□□ 0.43
USP38-202ENST00000510377 SDF4Q9BRK5 362 aa17.71■□□□□ 0.43
USP38-202ENST00000510377 ATP8B2P98198 1209 aa17.71■□□□□ 0.43
USP38-202ENST00000510377 IGSF3O75054 1194 aa17.7■□□□□ 0.42
USP38-202ENST00000510377 PI4KAP2A4QPH2 592 aa17.7■□□□□ 0.42
USP38-202ENST00000510377 GLRX3O76003 335 aaKnown RBP17.7■□□□□ 0.42
USP38-202ENST00000510377 PI4KAP1Q8N8J0 262 aa17.7■□□□□ 0.42
USP38-202ENST00000510377 MYOM2P54296 1465 aa17.7■□□□□ 0.42
USP38-202ENST00000510377 FAM173BQ6P4H8 233 aa17.7■□□□□ 0.42
USP38-202ENST00000510377 ZNF530Q6P9A1 599 aaPredicted RBP17.7■□□□□ 0.42
USP38-202ENST00000510377 HOMER1Q86YM7 354 aa17.7■□□□□ 0.42
USP38-202ENST00000510377 ZFYVE9O95405 1425 aa17.69■□□□□ 0.42
USP38-202ENST00000510377 CHL1O00533 1208 aa17.69■□□□□ 0.42
USP38-202ENST00000510377 SYT1P21579 422 aa17.69■□□□□ 0.42
USP38-202ENST00000510377 TPM3P06753 285 aa17.69■□□□□ 0.42
USP38-202ENST00000510377 TTC21BQ7Z4L5 1316 aa17.69■□□□□ 0.42
USP38-202ENST00000510377 NLRP1Q9C000 1473 aa17.68■□□□□ 0.42
USP38-202ENST00000510377 RTL1A6NKG5 1358 aa17.68■□□□□ 0.42
USP38-202ENST00000510377 DDX58O95786 925 aaKnown RBP17.68■□□□□ 0.42
USP38-202ENST00000510377 HSPA2P54652 639 aa17.68■□□□□ 0.42
USP38-202ENST00000510377 CCDC112Q8NEF3 446 aa17.68■□□□□ 0.42
USP38-202ENST00000510377 PHAXQ9H814 394 aaKnown RBP17.68■□□□□ 0.42
USP38-202ENST00000510377 BRD1O95696 1058 aa17.68■□□□□ 0.42
USP38-202ENST00000510377 MYL6BP14649 208 aa17.68■□□□□ 0.42
USP38-202ENST00000510377 TPM4P67936 248 aa17.68■□□□□ 0.42
USP38-202ENST00000510377 CCAR2Q8N163 923 aaKnown RBP17.68■□□□□ 0.42
USP38-202ENST00000510377 PLXNC1O60486 1568 aa17.68■□□□□ 0.42
USP38-202ENST00000510377 ANAPC15P60006 121 aa17.67■□□□□ 0.42
USP38-202ENST00000510377 ZSCAN31Q96LW9 406 aaPredicted RBP17.67■□□□□ 0.42
USP38-202ENST00000510377 F13A1P00488 732 aa17.67■□□□□ 0.42
USP38-202ENST00000510377 UNC5CLQ8IV45 518 aa17.66■□□□□ 0.42
USP38-202ENST00000510377 CHD1O14646 1710 aa17.66■□□□□ 0.42
USP38-202ENST00000510377 KINO60870 393 aaKnown RBP17.66■□□□□ 0.42
USP38-202ENST00000510377 DNAAF4Q8WXU2 420 aa17.66■□□□□ 0.42
USP38-202ENST00000510377 PA2G4Q9UQ80 394 aaKnown RBP17.66■□□□□ 0.42
USP38-202ENST00000510377 LAMC1P11047 1609 aa17.66■□□□□ 0.42
USP38-202ENST00000510377 MAP3K4Q9Y6R4 1608 aa17.65■□□□□ 0.42
USP38-202ENST00000510377 BTBD11A6QL63 1104 aa17.65■□□□□ 0.42
USP38-202ENST00000510377 MPRIPQ6WCQ1 1025 aa17.65■□□□□ 0.42
USP38-202ENST00000510377 INTS4Q96HW7 963 aaKnown RBP17.65■□□□□ 0.42
USP38-202ENST00000510377 GUCY1B3Q02153 619 aa17.65■□□□□ 0.42
USP38-202ENST00000510377 DNAJC5Q9H3Z4 198 aa17.65■□□□□ 0.42
USP38-202ENST00000510377 SMC2O95347 1197 aa17.65■□□□□ 0.42
USP38-202ENST00000510377 JARID2Q92833 1246 aaPredicted RBP17.65■□□□□ 0.42
USP38-202ENST00000510377 PPP6R1Q9UPN7 881 aa17.65■□□□□ 0.42
USP38-202ENST00000510377 ME1P48163 572 aa17.64■□□□□ 0.41
USP38-202ENST00000510377 CCDC186Q7Z3E2 898 aa17.64■□□□□ 0.41
USP38-202ENST00000510377 TRMT1Q9NXH9 659 aaKnown RBP17.64■□□□□ 0.41
USP38-202ENST00000510377 UVSSAQ2YD98 709 aa17.64■□□□□ 0.41
USP38-202ENST00000510377 TAF7LQ5H9L4 462 aa17.64■□□□□ 0.41
USP38-202ENST00000510377 PIP4K2BP78356 416 aa17.64■□□□□ 0.41
USP38-202ENST00000510377 CREBRFQ8IUR6 639 aa17.64■□□□□ 0.41
USP38-202ENST00000510377 CPLX1O14810 134 aa17.63■□□□□ 0.41
USP38-202ENST00000510377 ECHDC1Q9NTX5 307 aa17.63■□□□□ 0.41
USP38-202ENST00000510377 CHPF2Q9P2E5 772 aa17.63■□□□□ 0.41
USP38-202ENST00000510377 ZNF500O60304 480 aaPredicted RBP17.63■□□□□ 0.41
USP38-202ENST00000510377 PTGS1P23219 599 aa17.63■□□□□ 0.41
USP38-202ENST00000510377 ZDHHC9Q9Y397 364 aa17.63■□□□□ 0.41
USP38-202ENST00000510377 TNNT1P13805 278 aa17.63■□□□□ 0.41
USP38-202ENST00000510377 ERC1Q8IUD2 1116 aa17.63■□□□□ 0.41
USP38-202ENST00000510377 EYA1Q99502 592 aa17.63■□□□□ 0.41
USP38-202ENST00000510377 DACT1Q9NYF0 836 aa17.63■□□□□ 0.41
USP38-202ENST00000510377 ZFYVE16Q7Z3T8 1539 aa17.63■□□□□ 0.41
USP38-202ENST00000510377 ABCA6Q8N139 1617 aa17.63■□□□□ 0.41
USP38-202ENST00000510377 ZNF853P0CG23 659 aa17.62■□□□□ 0.41
USP38-202ENST00000510377 EVA1CP58658 441 aa17.62■□□□□ 0.41
USP38-202ENST00000510377 TOMM22Q9NS69 142 aa17.62■□□□□ 0.41
USP38-202ENST00000510377 LUZP1Q86V48 1076 aa17.62■□□□□ 0.41
USP38-202ENST00000510377 PRIMPOLQ96LW4 560 aa17.62■□□□□ 0.41
USP38-202ENST00000510377 LRRC2Q9BYS8 371 aa17.62■□□□□ 0.41
USP38-202ENST00000510377 SH2B1Q9NRF2 756 aaPredicted RBP17.62■□□□□ 0.41
USP38-202ENST00000510377 MAP3K19Q56UN5 1328 aa17.61■□□□□ 0.41
USP38-202ENST00000510377 ZNF165P49910 485 aa17.61■□□□□ 0.41
USP38-202ENST00000510377 BRPF1P55201 1214 aaPredicted RBP17.61■□□□□ 0.41
USP38-202ENST00000510377 CLIP2Q9UDT6 1046 aa17.61■□□□□ 0.41
USP38-202ENST00000510377 SNX14Q9Y5W7 946 aa17.61■□□□□ 0.41
USP38-202ENST00000510377 ANO6Q4KMQ2 910 aa17.61■□□□□ 0.41
USP38-202ENST00000510377 RBM8AQ9Y5S9 174 aaKnown RBP17.61■□□□□ 0.41
USP38-202ENST00000510377 DDIT3P35638 169 aa17.6■□□□□ 0.41
USP38-202ENST00000510377 ANKRD1Q15327 319 aa17.6■□□□□ 0.41
USP38-202ENST00000510377 STK11IPQ8N1F8 1099 aa17.6■□□□□ 0.41
USP38-202ENST00000510377 SPHKAPQ2M3C7 1700 aa17.6■□□□□ 0.41
USP38-202ENST00000510377 HIP1O00291 1037 aa17.6■□□□□ 0.41
USP38-202ENST00000510377 WASHC4Q2M389 1173 aa17.6■□□□□ 0.41
USP38-202ENST00000510377 TTC5Q8N0Z6 440 aa17.6■□□□□ 0.41
USP38-202ENST00000510377 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.6■□□□□ 0.41
USP38-202ENST00000510377 V9GYY5 206 aaPredicted RBP17.6■□□□□ 0.41
USP38-202ENST00000510377 SOS1Q07889 1333 aaPredicted RBP17.6■□□□□ 0.41
USP38-202ENST00000510377 IQSEC2Q5JU85 1478 aa17.59■□□□□ 0.41
USP38-202ENST00000510377 KIF1BO60333 1816 aa17.59■□□□□ 0.41
USP38-202ENST00000510377 MAP3K2Q9Y2U5 619 aa17.59■□□□□ 0.41
USP38-202ENST00000510377 FAM177A1Q8N128 213 aaPredicted RBP17.59■□□□□ 0.41
USP38-202ENST00000510377 SCAND2PQ9GZW5 306 aaPredicted RBP17.59■□□□□ 0.41
USP38-202ENST00000510377 NLRP2Q9NX02 1062 aa17.59■□□□□ 0.41
USP38-202ENST00000510377 PLEKHO1Q53GL0 409 aaPredicted RBP17.58■□□□□ 0.41
USP38-202ENST00000510377 DNAJC25Q9H1X3 360 aa17.58■□□□□ 0.41
USP38-202ENST00000510377 AMOTL2Q9Y2J4 779 aa17.58■□□□□ 0.41
USP38-202ENST00000510377 TET3O43151 1660 aa17.58■□□□□ 0.41
USP38-202ENST00000510377 APPP05067 770 aa17.58■□□□□ 0.4
USP38-202ENST00000510377 NBPF7P0C2Y1 421 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms