RNA–Protein interactions for RNA: ENST00000510356.5

CALCOCO2-217, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 1 (best)

Gene CALCOCO2, Length 1,009 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-217ENST00000510356 COL13A1Q5TAT6 717 aaPredicted RBP11.83□□□□□ -0.52
CALCOCO2-217ENST00000510356 MSL1Q68DK7 614 aa11.83□□□□□ -0.52
CALCOCO2-217ENST00000510356 C16orf71Q8IYS4 520 aaPredicted RBP11.83□□□□□ -0.52
CALCOCO2-217ENST00000510356 JMYQ8N9B5 988 aa11.83□□□□□ -0.52
CALCOCO2-217ENST00000510356 DDX12PQ92771 950 aa11.83□□□□□ -0.52
CALCOCO2-217ENST00000510356 KLRG1Q96E93 195 aa11.83□□□□□ -0.52
CALCOCO2-217ENST00000510356 KAT6BQ8WYB5 2073 aa11.83□□□□□ -0.52
CALCOCO2-217ENST00000510356 GRXCR2A6NFK2 248 aa11.82□□□□□ -0.52
CALCOCO2-217ENST00000510356 KCNQ4P56696 695 aa11.82□□□□□ -0.52
CALCOCO2-217ENST00000510356 NBPF1Q3BBV0 1214 aa11.82□□□□□ -0.52
CALCOCO2-217ENST00000510356 RBM46Q8TBY0 533 aaKnown RBP11.82□□□□□ -0.52
CALCOCO2-217ENST00000510356 KIAA1210Q9ULL0 1709 aa11.82□□□□□ -0.52
CALCOCO2-217ENST00000510356 IGSF1Q8N6C5 1336 aa11.82□□□□□ -0.52
CALCOCO2-217ENST00000510356 NFAT5O94916 1531 aa11.81□□□□□ -0.52
CALCOCO2-217ENST00000510356 KTN1Q86UP2 1357 aaKnown RBP11.81□□□□□ -0.52
CALCOCO2-217ENST00000510356 FSTL1Q12841 308 aa11.81□□□□□ -0.52
CALCOCO2-217ENST00000510356 CDAN1Q8IWY9 1227 aa11.81□□□□□ -0.52
CALCOCO2-217ENST00000510356 USP31Q70CQ4 1352 aa11.8□□□□□ -0.52
CALCOCO2-217ENST00000510356 GOLGB1Q14789 3259 aaKnown RBP11.8□□□□□ -0.52
CALCOCO2-217ENST00000510356 RGPD5Q99666 1765 aa11.8□□□□□ -0.52
CALCOCO2-217ENST00000510356 RAB3GAP2Q9H2M9 1393 aa11.79□□□□□ -0.52
CALCOCO2-217ENST00000510356 NSD3Q9BZ95 1437 aa11.79□□□□□ -0.52
CALCOCO2-217ENST00000510356 SMYD5Q6GMV2 418 aa11.79□□□□□ -0.52
CALCOCO2-217ENST00000510356 ZCRB1Q8TBF4 217 aaKnown RBP11.79□□□□□ -0.52
CALCOCO2-217ENST00000510356 LHX6Q9UPM6 363 aa11.79□□□□□ -0.52
CALCOCO2-217ENST00000510356 TULP1O00294 542 aaPredicted RBP11.77□□□□□ -0.53
CALCOCO2-217ENST00000510356 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.77□□□□□ -0.53
CALCOCO2-217ENST00000510356 IP6K1Q92551 441 aa11.77□□□□□ -0.53
CALCOCO2-217ENST00000510356 AK7Q96M32 723 aa11.77□□□□□ -0.53
CALCOCO2-217ENST00000510356 CGNL1Q0VF96 1302 aa11.77□□□□□ -0.53
CALCOCO2-217ENST00000510356 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.76□□□□□ -0.53
CALCOCO2-217ENST00000510356 SMARCC1Q92922 1105 aaPredicted RBP11.76□□□□□ -0.53
CALCOCO2-217ENST00000510356 NSD2O96028 1365 aa11.76□□□□□ -0.53
CALCOCO2-217ENST00000510356 TGFB2P61812 414 aa11.75□□□□□ -0.53
CALCOCO2-217ENST00000510356 HDGFL2Q7Z4V5 671 aaPredicted RBP11.75□□□□□ -0.53
CALCOCO2-217ENST00000510356 MARVELD3Q96A59 401 aa11.75□□□□□ -0.53
CALCOCO2-217ENST00000510356 WWC3Q9ULE0 1092 aa11.75□□□□□ -0.53
CALCOCO2-217ENST00000510356 KDM2BQ8NHM5 1336 aa11.75□□□□□ -0.53
CALCOCO2-217ENST00000510356 LY75O60449 1722 aa11.74□□□□□ -0.53
CALCOCO2-217ENST00000510356 TUBGCP6Q96RT7 1819 aa11.74□□□□□ -0.53
CALCOCO2-217ENST00000510356 PHF14O94880 888 aa11.74□□□□□ -0.53
CALCOCO2-217ENST00000510356 OSBPP22059 807 aa11.74□□□□□ -0.53
CALCOCO2-217ENST00000510356 PCDHGA10Q9Y5H3 936 aa11.74□□□□□ -0.53
CALCOCO2-217ENST00000510356 SSFA2P28290 1259 aa11.73□□□□□ -0.53
CALCOCO2-217ENST00000510356 FOSBP53539 338 aa11.73□□□□□ -0.53
CALCOCO2-217ENST00000510356 ARHGAP27Q6ZUM4 889 aa11.73□□□□□ -0.53
CALCOCO2-217ENST00000510356 NME9Q86XW9 330 aa11.73□□□□□ -0.53
CALCOCO2-217ENST00000510356 ZNF454Q8N9F8 522 aa11.73□□□□□ -0.53
CALCOCO2-217ENST00000510356 LTV1Q96GA3 475 aaPredicted RBP11.73□□□□□ -0.53
CALCOCO2-217ENST00000510356 PLEKHG2Q9H7P9 1386 aa11.73□□□□□ -0.53
CALCOCO2-217ENST00000510356 NMRK2Q9NPI5 230 aa11.73□□□□□ -0.53
CALCOCO2-217ENST00000510356 PALLDQ8WX93 1383 aa11.72□□□□□ -0.53
CALCOCO2-217ENST00000510356 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.72□□□□□ -0.53
CALCOCO2-217ENST00000510356 SMC1BQ8NDV3 1235 aa11.72□□□□□ -0.53
CALCOCO2-217ENST00000510356 RAPGEF4Q8WZA2 1011 aa11.72□□□□□ -0.53
CALCOCO2-217ENST00000510356 EPAS1Q99814 870 aa11.72□□□□□ -0.53
CALCOCO2-217ENST00000510356 BCS1LQ9Y276 419 aa11.72□□□□□ -0.53
CALCOCO2-217ENST00000510356 WDR90Q96KV7 1748 aa11.72□□□□□ -0.53
CALCOCO2-217ENST00000510356 CICQ96RK0 1608 aaPredicted RBP11.71□□□□□ -0.53
CALCOCO2-217ENST00000510356 EMP3P54852 163 aa11.71□□□□□ -0.53
CALCOCO2-217ENST00000510356 RBM26Q5T8P6 1007 aaKnown RBP11.71□□□□□ -0.53
CALCOCO2-217ENST00000510356 TERF2IPQ9NYB0 399 aa11.71□□□□□ -0.53
CALCOCO2-217ENST00000510356 AMPHP49418 695 aa11.7□□□□□ -0.54
CALCOCO2-217ENST00000510356 TYW1BQ6NUM6 668 aa11.7□□□□□ -0.54
CALCOCO2-217ENST00000510356 FAM208AQ9UK61 1670 aaKnown RBP11.7□□□□□ -0.54
CALCOCO2-217ENST00000510356 PCDH11XQ9BZA7 1347 aa11.69□□□□□ -0.54
CALCOCO2-217ENST00000510356 PCDH11YQ9BZA8 1340 aa11.69□□□□□ -0.54
CALCOCO2-217ENST00000510356 TATP17735 454 aaPredicted RBP11.69□□□□□ -0.54
CALCOCO2-217ENST00000510356 HTRA3P83110 453 aa11.69□□□□□ -0.54
CALCOCO2-217ENST00000510356 MPRIPQ6WCQ1 1025 aa11.69□□□□□ -0.54
CALCOCO2-217ENST00000510356 NLGN1Q8N2Q7 840 aa11.69□□□□□ -0.54
CALCOCO2-217ENST00000510356 DOT1LQ8TEK3 1739 aa11.69□□□□□ -0.54
CALCOCO2-217ENST00000510356 EDC4Q6P2E9 1401 aaKnown RBP11.69□□□□□ -0.54
CALCOCO2-217ENST00000510356 C10orf71Q711Q0 1435 aa11.69□□□□□ -0.54
CALCOCO2-217ENST00000510356 SBNO2Q9Y2G9 1366 aa11.68□□□□□ -0.54
CALCOCO2-217ENST00000510356 FCHSD2O94868 740 aa11.68□□□□□ -0.54
CALCOCO2-217ENST00000510356 HSPA1AP0DMV8 641 aaKnown RBP11.68□□□□□ -0.54
CALCOCO2-217ENST00000510356 HSPA1BP0DMV9 641 aaKnown RBP11.68□□□□□ -0.54
CALCOCO2-217ENST00000510356 HOXC9P31274 260 aa11.68□□□□□ -0.54
CALCOCO2-217ENST00000510356 C9orf131Q5VYM1 1079 aa11.68□□□□□ -0.54
CALCOCO2-217ENST00000510356 TMC1Q8TDI8 760 aa11.68□□□□□ -0.54
CALCOCO2-217ENST00000510356 CCDC87Q9NVE4 849 aa11.68□□□□□ -0.54
CALCOCO2-217ENST00000510356 C5P01031 1676 aa11.68□□□□□ -0.54
CALCOCO2-217ENST00000510356 USP54Q70EL1 1684 aa11.68□□□□□ -0.54
CALCOCO2-217ENST00000510356 LTN1O94822 1766 aa11.67□□□□□ -0.54
CALCOCO2-217ENST00000510356 MMP10P09238 476 aa11.67□□□□□ -0.54
CALCOCO2-217ENST00000510356 PPP4R3BQ5MIZ7 849 aa11.67□□□□□ -0.54
CALCOCO2-217ENST00000510356 ZDHHC16Q969W1 377 aa11.67□□□□□ -0.54
CALCOCO2-217ENST00000510356 COG3Q96JB2 828 aa11.67□□□□□ -0.54
CALCOCO2-217ENST00000510356 A0A0G2JLW4 131 aa11.66□□□□□ -0.54
CALCOCO2-217ENST00000510356 FAM205CA6NFA0 338 aa11.66□□□□□ -0.54
CALCOCO2-217ENST00000510356 VARS2Q5ST30 1063 aaKnown RBP11.66□□□□□ -0.54
CALCOCO2-217ENST00000510356 FBXW7Q969H0 707 aa11.66□□□□□ -0.54
CALCOCO2-217ENST00000510356 RRAGCQ9HB90 399 aa11.66□□□□□ -0.54
CALCOCO2-217ENST00000510356 SMG6Q86US8 1419 aaKnown RBP11.66□□□□□ -0.54
CALCOCO2-217ENST00000510356 PXDNLA1KZ92 1463 aa11.65□□□□□ -0.54
CALCOCO2-217ENST00000510356 MAP3K7O43318 606 aa11.65□□□□□ -0.54
CALCOCO2-217ENST00000510356 TMF1P82094 1093 aa11.65□□□□□ -0.54
CALCOCO2-217ENST00000510356 PUS7Q96PZ0 661 aaKnown RBP11.65□□□□□ -0.54
CALCOCO2-217ENST00000510356 PIM2Q9P1W9 311 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms