RNA–Protein interactions for RNA: ENST00000510003.5

SNCAIP-214, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,039 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-214ENST00000510003 RAD50Q92878 1312 aa17.52■□□□□ 0.39
SNCAIP-214ENST00000510003 PXDNLA1KZ92 1463 aa17.51■□□□□ 0.39
SNCAIP-214ENST00000510003 KIF20AO95235 890 aa17.51■□□□□ 0.39
SNCAIP-214ENST00000510003 F13A1P00488 732 aa17.51■□□□□ 0.39
SNCAIP-214ENST00000510003 TTC21BQ7Z4L5 1316 aa17.51■□□□□ 0.39
SNCAIP-214ENST00000510003 PDIA4P13667 645 aaKnown RBP17.5■□□□□ 0.39
SNCAIP-214ENST00000510003 LIMCH1Q9UPQ0 1083 aa17.5■□□□□ 0.39
SNCAIP-214ENST00000510003 A2ML1A8K2U0 1454 aa17.5■□□□□ 0.39
SNCAIP-214ENST00000510003 RAB11FIP3O75154 756 aa17.5■□□□□ 0.39
SNCAIP-214ENST00000510003 TSHZ3Q63HK5 1081 aa17.5■□□□□ 0.39
SNCAIP-214ENST00000510003 G2E3Q7L622 706 aa17.5■□□□□ 0.39
SNCAIP-214ENST00000510003 STK31Q9BXU1 1019 aa17.5■□□□□ 0.39
SNCAIP-214ENST00000510003 SENP3Q9H4L4 574 aaPredicted RBP17.5■□□□□ 0.39
SNCAIP-214ENST00000510003 BCL2L12Q9HB09 334 aa17.5■□□□□ 0.39
SNCAIP-214ENST00000510003 XRN1Q8IZH2 1706 aaKnown RBP17.49■□□□□ 0.39
SNCAIP-214ENST00000510003 F6X3S4 739 aa17.49■□□□□ 0.39
SNCAIP-214ENST00000510003 ANKRD7Q92527 254 aa17.49■□□□□ 0.39
SNCAIP-214ENST00000510003 CTIFO43310 598 aaKnown RBP17.48■□□□□ 0.39
SNCAIP-214ENST00000510003 SYT1P21579 422 aa17.48■□□□□ 0.39
SNCAIP-214ENST00000510003 PPP4R3BQ5MIZ7 849 aa17.48■□□□□ 0.39
SNCAIP-214ENST00000510003 TSPYL4Q9UJ04 414 aa17.48■□□□□ 0.39
SNCAIP-214ENST00000510003 TECPR2O15040 1411 aa17.48■□□□□ 0.39
SNCAIP-214ENST00000510003 PNMA6EA0A0J9YXQ4 647 aa17.48■□□□□ 0.39
SNCAIP-214ENST00000510003 SGSM2O43147 1006 aa17.48■□□□□ 0.39
SNCAIP-214ENST00000510003 SYCP1Q15431 976 aa17.48■□□□□ 0.39
SNCAIP-214ENST00000510003 FOXD4L6Q3SYB3 417 aaPredicted RBP17.48■□□□□ 0.39
SNCAIP-214ENST00000510003 FOXD4L3Q6VB84 417 aaPredicted RBP17.48■□□□□ 0.39
SNCAIP-214ENST00000510003 PDCL2Q8N4E4 241 aa17.48■□□□□ 0.39
SNCAIP-214ENST00000510003 ARID3AQ99856 593 aa17.48■□□□□ 0.39
SNCAIP-214ENST00000510003 PRDM10Q9NQV6 1147 aa17.48■□□□□ 0.39
SNCAIP-214ENST00000510003 SMC3Q9UQE7 1217 aa17.48■□□□□ 0.39
SNCAIP-214ENST00000510003 OVOS2A0A0J9YW53 1432 aa17.48■□□□□ 0.39
SNCAIP-214ENST00000510003 OVOS2Q6IE36 1432 aa17.48■□□□□ 0.39
SNCAIP-214ENST00000510003 CEP170BQ9Y4F5 1589 aaPredicted RBP17.47■□□□□ 0.39
SNCAIP-214ENST00000510003 SNX14Q9Y5W7 946 aa17.47■□□□□ 0.39
SNCAIP-214ENST00000510003 TCHHQ07283 1943 aa17.47■□□□□ 0.39
SNCAIP-214ENST00000510003 CCDC192P0DO97 292 aa17.47■□□□□ 0.39
SNCAIP-214ENST00000510003 UNC5CLQ8IV45 518 aa17.47■□□□□ 0.39
SNCAIP-214ENST00000510003 THEMISQ8N1K5 641 aaPredicted RBP17.47■□□□□ 0.39
SNCAIP-214ENST00000510003 RTF1Q92541 710 aaKnown RBP17.47■□□□□ 0.39
SNCAIP-214ENST00000510003 NALCNQ8IZF0 1738 aa17.47■□□□□ 0.39
SNCAIP-214ENST00000510003 FAM208AQ9UK61 1670 aaKnown RBP17.46■□□□□ 0.39
SNCAIP-214ENST00000510003 CCDC30Q5VVM6 783 aa17.46■□□□□ 0.39
SNCAIP-214ENST00000510003 FEZ1Q99689 392 aa17.46■□□□□ 0.39
SNCAIP-214ENST00000510003 UBR1Q8IWV7 1749 aa17.46■□□□□ 0.39
SNCAIP-214ENST00000510003 HTATSF1O43719 755 aaKnown RBP17.45■□□□□ 0.38
SNCAIP-214ENST00000510003 HSPA2P54652 639 aa17.45■□□□□ 0.38
SNCAIP-214ENST00000510003 AK2P54819 239 aa17.45■□□□□ 0.38
SNCAIP-214ENST00000510003 FLIIQ13045 1269 aa17.45■□□□□ 0.38
SNCAIP-214ENST00000510003 SSH3Q8TE77 659 aa17.45■□□□□ 0.38
SNCAIP-214ENST00000510003 ZSCAN31Q96LW9 406 aaPredicted RBP17.45■□□□□ 0.38
SNCAIP-214ENST00000510003 LSG1Q9H089 658 aaKnown RBP17.45■□□□□ 0.38
SNCAIP-214ENST00000510003 KCNF1Q9H3M0 494 aa17.45■□□□□ 0.38
SNCAIP-214ENST00000510003 CACNA1FO60840 1977 aa17.45■□□□□ 0.38
SNCAIP-214ENST00000510003 RUFY3Q7L099 469 aa17.45■□□□□ 0.38
SNCAIP-214ENST00000510003 C17orf53Q8N3J3 647 aaPredicted RBP17.45■□□□□ 0.38
SNCAIP-214ENST00000510003 TSC1Q92574 1164 aa17.45■□□□□ 0.38
SNCAIP-214ENST00000510003 SH2B1Q9NRF2 756 aaPredicted RBP17.45■□□□□ 0.38
SNCAIP-214ENST00000510003 USP31Q70CQ4 1352 aa17.45■□□□□ 0.38
SNCAIP-214ENST00000510003 NRXN3Q9Y4C0 1643 aa17.44■□□□□ 0.38
SNCAIP-214ENST00000510003 RIOK3O14730 519 aaKnown RBP17.44■□□□□ 0.38
SNCAIP-214ENST00000510003 CRYBG1Q9Y4K1 1723 aa17.44■□□□□ 0.38
SNCAIP-214ENST00000510003 FIBPO43427 364 aa17.43■□□□□ 0.38
SNCAIP-214ENST00000510003 CBX1P83916 185 aa17.43■□□□□ 0.38
SNCAIP-214ENST00000510003 ATP2B3Q16720 1220 aa17.43■□□□□ 0.38
SNCAIP-214ENST00000510003 GIMAP6Q6P9H5 292 aa17.43■□□□□ 0.38
SNCAIP-214ENST00000510003 CNTROBQ8N137 903 aa17.43■□□□□ 0.38
SNCAIP-214ENST00000510003 MPNDQ8N594 471 aa17.43■□□□□ 0.38
SNCAIP-214ENST00000510003 JARID2Q92833 1246 aaPredicted RBP17.43■□□□□ 0.38
SNCAIP-214ENST00000510003 PYCARDQ9ULZ3 195 aa17.43■□□□□ 0.38
SNCAIP-214ENST00000510003 LRRC37A3O60309 1634 aa17.43■□□□□ 0.38
SNCAIP-214ENST00000510003 LMTK3Q96Q04 1460 aa17.43■□□□□ 0.38
SNCAIP-214ENST00000510003 CCDC171Q6TFL3 1326 aa17.43■□□□□ 0.38
SNCAIP-214ENST00000510003 PEAK1Q9H792 1746 aa17.43■□□□□ 0.38
SNCAIP-214ENST00000510003 PI4K2BQ8TCG2 481 aa17.43■□□□□ 0.38
SNCAIP-214ENST00000510003 FAM200AQ8TCP9 573 aa17.43■□□□□ 0.38
SNCAIP-214ENST00000510003 TM6SF1Q9BZW5 370 aa17.43■□□□□ 0.38
SNCAIP-214ENST00000510003 IL25Q9H293 177 aa17.43■□□□□ 0.38
SNCAIP-214ENST00000510003 MTMR6Q9Y217 621 aa17.43■□□□□ 0.38
SNCAIP-214ENST00000510003 ZNF142P52746 1687 aaPredicted RBP17.43■□□□□ 0.38
SNCAIP-214ENST00000510003 VPS53Q5VIR6 699 aa17.42■□□□□ 0.38
SNCAIP-214ENST00000510003 ZHX1Q9UKY1 873 aaPredicted RBP17.42■□□□□ 0.38
SNCAIP-214ENST00000510003 LRRFIP2Q9Y608 721 aaKnown RBP17.42■□□□□ 0.38
SNCAIP-214ENST00000510003 KDRP35968 1356 aa17.42■□□□□ 0.38
SNCAIP-214ENST00000510003 ELP1O95163 1332 aa17.42■□□□□ 0.38
SNCAIP-214ENST00000510003 USP42Q9H9J4 1324 aaKnown RBP17.42■□□□□ 0.38
SNCAIP-214ENST00000510003 MAP3K5Q99683 1374 aa17.42■□□□□ 0.38
SNCAIP-214ENST00000510003 AP5Z1O43299 807 aa17.42■□□□□ 0.38
SNCAIP-214ENST00000510003 BABAM1Q9NWV8 329 aa17.42■□□□□ 0.38
SNCAIP-214ENST00000510003 TMEM2Q9UHN6 1383 aa17.41■□□□□ 0.38
SNCAIP-214ENST00000510003 UBTFL1P0CB47 393 aaPredicted RBP17.41■□□□□ 0.38
SNCAIP-214ENST00000510003 POLA2Q14181 598 aa17.41■□□□□ 0.38
SNCAIP-214ENST00000510003 HYPKQ9NX55 129 aa17.41■□□□□ 0.38
SNCAIP-214ENST00000510003 LTKP29376 864 aa17.4■□□□□ 0.38
SNCAIP-214ENST00000510003 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.4■□□□□ 0.38
SNCAIP-214ENST00000510003 KCNB2Q92953 911 aa17.4■□□□□ 0.38
SNCAIP-214ENST00000510003 KIF1BPQ96EK5 621 aa17.4■□□□□ 0.38
SNCAIP-214ENST00000510003 GJB2P29033 226 aa17.4■□□□□ 0.38
SNCAIP-214ENST00000510003 MTHFSDQ2M296 383 aaKnown RBP17.4■□□□□ 0.38
SNCAIP-214ENST00000510003 RUFY2Q8WXA3 655 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms