RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 TEX13AQ9BXU3 409 aaPredicted RBP22.31■■□□□ 1.16
CLDND1-219ENST00000508659 ZBTB1Q9Y2K1 713 aa22.31■■□□□ 1.16
CLDND1-219ENST00000508659 SOS1Q07889 1333 aaPredicted RBP22.31■■□□□ 1.16
CLDND1-219ENST00000508659 COL15A1P39059 1388 aa22.3■■□□□ 1.16
CLDND1-219ENST00000508659 RRP7AQ9Y3A4 280 aaKnown RBP22.3■■□□□ 1.16
CLDND1-219ENST00000508659 SYT17Q9BSW7 474 aa22.29■■□□□ 1.16
CLDND1-219ENST00000508659 USP42Q9H9J4 1324 aaKnown RBP22.29■■□□□ 1.16
CLDND1-219ENST00000508659 NEUROD2Q15784 382 aa22.28■■□□□ 1.16
CLDND1-219ENST00000508659 MRS2Q9HD23 443 aa22.27■■□□□ 1.16
CLDND1-219ENST00000508659 KDM3BQ7LBC6 1761 aa22.27■■□□□ 1.16
CLDND1-219ENST00000508659 GYS1P13807 737 aa22.26■■□□□ 1.15
CLDND1-219ENST00000508659 CANXP27824 592 aaKnown RBP22.26■■□□□ 1.15
CLDND1-219ENST00000508659 NLGN1Q8N2Q7 840 aa22.26■■□□□ 1.15
CLDND1-219ENST00000508659 MIS18AQ9NYP9 233 aa22.26■■□□□ 1.15
CLDND1-219ENST00000508659 DCAF8L1A6NGE4 600 aa22.25■■□□□ 1.15
CLDND1-219ENST00000508659 SNRPA1P09661 255 aaKnown RBP22.25■■□□□ 1.15
CLDND1-219ENST00000508659 CCDC184Q52MB2 194 aa22.25■■□□□ 1.15
CLDND1-219ENST00000508659 SRP68Q9UHB9 627 aaKnown RBP22.25■■□□□ 1.15
CLDND1-219ENST00000508659 ZPR1O75312 459 aa22.24■■□□□ 1.15
CLDND1-219ENST00000508659 MMP10P09238 476 aa22.24■■□□□ 1.15
CLDND1-219ENST00000508659 TSPYL4Q9UJ04 414 aa22.24■■□□□ 1.15
CLDND1-219ENST00000508659 ZNF330Q9Y3S2 320 aaPredicted RBP22.24■■□□□ 1.15
CLDND1-219ENST00000508659 NPM2Q86SE8 214 aaKnown RBP22.23■■□□□ 1.15
CLDND1-219ENST00000508659 LAMB4A4D0S4 1761 aa22.22■■□□□ 1.15
CLDND1-219ENST00000508659 PRAMEF22A3QJZ6 481 aa22.22■■□□□ 1.15
CLDND1-219ENST00000508659 A0A087WZG4 1122 aa22.21■■□□□ 1.15
CLDND1-219ENST00000508659 USPL1Q5W0Q7 1092 aa22.21■■□□□ 1.15
CLDND1-219ENST00000508659 USP16Q9Y5T5 823 aa22.21■■□□□ 1.15
CLDND1-219ENST00000508659 IL6STP40189 918 aaPredicted RBP22.2■■□□□ 1.14
CLDND1-219ENST00000508659 EIF5P55010 431 aaKnown RBP22.2■■□□□ 1.14
CLDND1-219ENST00000508659 NARFQ9UHQ1 456 aa22.2■■□□□ 1.14
CLDND1-219ENST00000508659 TRIM35Q9UPQ4 493 aa22.2■■□□□ 1.14
CLDND1-219ENST00000508659 APAF1O14727 1248 aa22.19■■□□□ 1.14
CLDND1-219ENST00000508659 A1BGP04217 495 aa22.19■■□□□ 1.14
CLDND1-219ENST00000508659 EIF4A1P60842 406 aaKnown RBP22.19■■□□□ 1.14
CLDND1-219ENST00000508659 FKBP8Q14318 412 aa22.19■■□□□ 1.14
CLDND1-219ENST00000508659 NLGN2Q8NFZ4 835 aa22.19■■□□□ 1.14
CLDND1-219ENST00000508659 BABAM1Q9NWV8 329 aa22.19■■□□□ 1.14
CLDND1-219ENST00000508659 CD2APQ9Y5K6 639 aa22.19■■□□□ 1.14
CLDND1-219ENST00000508659 PARP3Q9Y6F1 533 aa22.19■■□□□ 1.14
CLDND1-219ENST00000508659 SCN7AQ01118 1682 aa22.19■■□□□ 1.14
CLDND1-219ENST00000508659 C10orf71Q711Q0 1435 aa22.16■■□□□ 1.14
CLDND1-219ENST00000508659 GIGYF1O75420 1035 aaPredicted RBP22.16■■□□□ 1.14
CLDND1-219ENST00000508659 PIP4K2AP48426 406 aaPredicted RBP22.16■■□□□ 1.14
CLDND1-219ENST00000508659 LAS1LQ9Y4W2 734 aaKnown RBP22.16■■□□□ 1.14
CLDND1-219ENST00000508659 CALD1Q05682 793 aaKnown RBP22.14■■□□□ 1.13
CLDND1-219ENST00000508659 PELP1Q8IZL8 1130 aaKnown RBP22.14■■□□□ 1.13
CLDND1-219ENST00000508659 DDR1Q08345 913 aa22.13■■□□□ 1.13
CLDND1-219ENST00000508659 TBC1D2BQ9UPU7 963 aa22.13■■□□□ 1.13
CLDND1-219ENST00000508659 DZIP3Q86Y13 1208 aaKnown RBP22.12■■□□□ 1.13
CLDND1-219ENST00000508659 BCL2L12Q9HB09 334 aa22.12■■□□□ 1.13
CLDND1-219ENST00000508659 POLRMTO00411 1230 aaKnown RBP22.11■■□□□ 1.13
CLDND1-219ENST00000508659 CHL1O00533 1208 aa22.11■■□□□ 1.13
CLDND1-219ENST00000508659 GPR162Q16538 588 aa22.11■■□□□ 1.13
CLDND1-219ENST00000508659 BCORQ6W2J9 1755 aa22.11■■□□□ 1.13
CLDND1-219ENST00000508659 NBPF26B4DH59 902 aa22.1■■□□□ 1.13
CLDND1-219ENST00000508659 NFIXQ14938 502 aa22.1■■□□□ 1.13
CLDND1-219ENST00000508659 NBPF10Q6P3W6 841 aaKnown RBP22.1■■□□□ 1.13
CLDND1-219ENST00000508659 NBPF15Q8N660 670 aa22.1■■□□□ 1.13
CLDND1-219ENST00000508659 CFAP44Q96MT7 982 aa22.1■■□□□ 1.13
CLDND1-219ENST00000508659 PXDNLA1KZ92 1463 aa22.09■■□□□ 1.13
CLDND1-219ENST00000508659 CAMTA2O94983 1202 aa22.09■■□□□ 1.13
CLDND1-219ENST00000508659 ERBB4Q15303 1308 aa22.08■■□□□ 1.13
CLDND1-219ENST00000508659 TM4SF1P30408 202 aa22.08■■□□□ 1.13
CLDND1-219ENST00000508659 BICDL1Q6ZP65 573 aa22.08■■□□□ 1.13
CLDND1-219ENST00000508659 IFT57Q9NWB7 429 aa22.08■■□□□ 1.13
CLDND1-219ENST00000508659 ZNF652Q9Y2D9 606 aa22.08■■□□□ 1.13
CLDND1-219ENST00000508659 CARMIL3Q8ND23 1372 aa22.08■■□□□ 1.12
CLDND1-219ENST00000508659 KIF13BQ9NQT8 1826 aa22.08■■□□□ 1.12
CLDND1-219ENST00000508659 UTRNP46939 3433 aa22.08■■□□□ 1.12
CLDND1-219ENST00000508659 SENP3-EIF4A1A0A087X0R7 540 aa22.06■■□□□ 1.12
CLDND1-219ENST00000508659 MYL6BP14649 208 aa22.06■■□□□ 1.12
CLDND1-219ENST00000508659 EIF2S2P20042 333 aaKnown RBP22.06■■□□□ 1.12
CLDND1-219ENST00000508659 TGFB2P61812 414 aa22.06■■□□□ 1.12
CLDND1-219ENST00000508659 GNAI1P63096 354 aa22.06■■□□□ 1.12
CLDND1-219ENST00000508659 TBC1D9BQ66K14 1250 aa22.06■■□□□ 1.12
CLDND1-219ENST00000508659 FAM9BQ8IZU0 186 aa22.06■■□□□ 1.12
CLDND1-219ENST00000508659 MBIPQ9NS73 344 aa22.06■■□□□ 1.12
CLDND1-219ENST00000508659 CCDC27Q2M243 656 aa22.05■■□□□ 1.12
CLDND1-219ENST00000508659 SERPINB2P05120 415 aa22.04■■□□□ 1.12
CLDND1-219ENST00000508659 KRT24Q2M2I5 525 aa22.04■■□□□ 1.12
CLDND1-219ENST00000508659 KIF6Q6ZMV9 814 aa22.04■■□□□ 1.12
CLDND1-219ENST00000508659 NGEFQ8N5V2 710 aa22.04■■□□□ 1.12
CLDND1-219ENST00000508659 WWC3Q9ULE0 1092 aa22.04■■□□□ 1.12
CLDND1-219ENST00000508659 GOLGB1Q14789 3259 aaKnown RBP22.04■■□□□ 1.12
CLDND1-219ENST00000508659 KIAA1551Q9HCM1 1747 aa22.03■■□□□ 1.12
CLDND1-219ENST00000508659 NRXN2Q9P2S2 1712 aa22.03■■□□□ 1.12
CLDND1-219ENST00000508659 RGL2O15211 777 aa22.03■■□□□ 1.12
CLDND1-219ENST00000508659 HOXB7P09629 217 aa22.03■■□□□ 1.12
CLDND1-219ENST00000508659 YBX3P16989 372 aaKnown RBP eCLIP22.03■■□□□ 1.12
CLDND1-219ENST00000508659 CLEC4GQ6UXB4 293 aa22.03■■□□□ 1.12
CLDND1-219ENST00000508659 ZNF853P0CG23 659 aa22.02■■□□□ 1.12
CLDND1-219ENST00000508659 SETDB2Q96T68 719 aa22.02■■□□□ 1.12
CLDND1-219ENST00000508659 NPHP1O15259 732 aa22.01■■□□□ 1.11
CLDND1-219ENST00000508659 NCBP3Q53F19 620 aaKnown RBP22.01■■□□□ 1.11
CLDND1-219ENST00000508659 HDGFL1Q5TGJ6 251 aa22.01■■□□□ 1.11
CLDND1-219ENST00000508659 WWC1Q8IX03 1113 aa22.01■■□□□ 1.11
CLDND1-219ENST00000508659 NECTIN2Q92692 538 aa22.01■■□□□ 1.11
CLDND1-219ENST00000508659 A0A0G2JLW4 131 aa22■■□□□ 1.11
CLDND1-219ENST00000508659 GRIN3BO60391 1043 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms