RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 MIS18AQ9NYP9 233 aa19.84■□□□□ 0.77
TRIO-211ENST00000508343 LMOD3Q0VAK6 560 aa19.83■□□□□ 0.77
TRIO-211ENST00000508343 ZBTB1Q9Y2K1 713 aa19.83■□□□□ 0.77
TRIO-211ENST00000508343 SOS1Q07889 1333 aaPredicted RBP19.82■□□□□ 0.76
TRIO-211ENST00000508343 DCAF8L1A6NGE4 600 aa19.82■□□□□ 0.76
TRIO-211ENST00000508343 GYS1P13807 737 aa19.82■□□□□ 0.76
TRIO-211ENST00000508343 CANXP27824 592 aaKnown RBP19.82■□□□□ 0.76
TRIO-211ENST00000508343 KLHL34Q8N239 644 aa19.82■□□□□ 0.76
TRIO-211ENST00000508343 RRP7AQ9Y3A4 280 aaKnown RBP19.82■□□□□ 0.76
TRIO-211ENST00000508343 SNRPA1P09661 255 aaKnown RBP19.81■□□□□ 0.76
TRIO-211ENST00000508343 NEUROD2Q15784 382 aa19.81■□□□□ 0.76
TRIO-211ENST00000508343 CCDC184Q52MB2 194 aa19.81■□□□□ 0.76
TRIO-211ENST00000508343 USP42Q9H9J4 1324 aaKnown RBP19.8■□□□□ 0.76
TRIO-211ENST00000508343 SRP68Q9UHB9 627 aaKnown RBP19.8■□□□□ 0.76
TRIO-211ENST00000508343 USP16Q9Y5T5 823 aa19.8■□□□□ 0.76
TRIO-211ENST00000508343 ZPR1O75312 459 aa19.79■□□□□ 0.76
TRIO-211ENST00000508343 MMP10P09238 476 aa19.79■□□□□ 0.76
TRIO-211ENST00000508343 CD2APQ9Y5K6 639 aa19.79■□□□□ 0.76
TRIO-211ENST00000508343 A1BGP04217 495 aa19.78■□□□□ 0.76
TRIO-211ENST00000508343 EIF5P55010 431 aaKnown RBP19.78■□□□□ 0.76
TRIO-211ENST00000508343 NARFQ9UHQ1 456 aa19.78■□□□□ 0.76
TRIO-211ENST00000508343 A0A087WZG4 1122 aa19.77■□□□□ 0.76
TRIO-211ENST00000508343 PRAMEF22A3QJZ6 481 aa19.77■□□□□ 0.76
TRIO-211ENST00000508343 IL6STP40189 918 aaPredicted RBP19.77■□□□□ 0.76
TRIO-211ENST00000508343 BABAM1Q9NWV8 329 aa19.77■□□□□ 0.76
TRIO-211ENST00000508343 TRIM35Q9UPQ4 493 aa19.77■□□□□ 0.76
TRIO-211ENST00000508343 COL15A1P39059 1388 aa19.77■□□□□ 0.76
TRIO-211ENST00000508343 EIF4A1P60842 406 aaKnown RBP19.76■□□□□ 0.75
TRIO-211ENST00000508343 FKBP8Q14318 412 aa19.76■□□□□ 0.75
TRIO-211ENST00000508343 USPL1Q5W0Q7 1092 aa19.76■□□□□ 0.75
TRIO-211ENST00000508343 APAF1O14727 1248 aa19.75■□□□□ 0.75
TRIO-211ENST00000508343 NLGN2Q8NFZ4 835 aa19.75■□□□□ 0.75
TRIO-211ENST00000508343 MRS2Q9HD23 443 aa19.75■□□□□ 0.75
TRIO-211ENST00000508343 TSPYL4Q9UJ04 414 aa19.75■□□□□ 0.75
TRIO-211ENST00000508343 C4AP0C0L4 1744 aa19.75■□□□□ 0.75
TRIO-211ENST00000508343 GIGYF1O75420 1035 aaPredicted RBP19.74■□□□□ 0.75
TRIO-211ENST00000508343 NPM2Q86SE8 214 aaKnown RBP19.74■□□□□ 0.75
TRIO-211ENST00000508343 ZNF330Q9Y3S2 320 aaPredicted RBP19.74■□□□□ 0.75
TRIO-211ENST00000508343 PARP3Q9Y6F1 533 aa19.74■□□□□ 0.75
TRIO-211ENST00000508343 TM4SF1P30408 202 aa19.72■□□□□ 0.75
TRIO-211ENST00000508343 BCL2L12Q9HB09 334 aa19.72■□□□□ 0.75
TRIO-211ENST00000508343 KDM3BQ7LBC6 1761 aa19.71■□□□□ 0.75
TRIO-211ENST00000508343 CHL1O00533 1208 aa19.71■□□□□ 0.75
TRIO-211ENST00000508343 TBC1D2BQ9UPU7 963 aa19.71■□□□□ 0.75
TRIO-211ENST00000508343 PIP4K2AP48426 406 aaPredicted RBP19.7■□□□□ 0.74
TRIO-211ENST00000508343 GPR162Q16538 588 aa19.7■□□□□ 0.74
TRIO-211ENST00000508343 NBPF26B4DH59 902 aa19.69■□□□□ 0.74
TRIO-211ENST00000508343 DDR1Q08345 913 aa19.69■□□□□ 0.74
TRIO-211ENST00000508343 NBPF10Q6P3W6 841 aaKnown RBP19.69■□□□□ 0.74
TRIO-211ENST00000508343 NBPF15Q8N660 670 aa19.69■□□□□ 0.74
TRIO-211ENST00000508343 LAS1LQ9Y4W2 734 aaKnown RBP19.69■□□□□ 0.74
TRIO-211ENST00000508343 UTRNP46939 3433 aa19.69■□□□□ 0.74
TRIO-211ENST00000508343 POLRMTO00411 1230 aaKnown RBP19.68■□□□□ 0.74
TRIO-211ENST00000508343 NFIXQ14938 502 aa19.68■□□□□ 0.74
TRIO-211ENST00000508343 TGFB2P61812 414 aa19.67■□□□□ 0.74
TRIO-211ENST00000508343 DZIP3Q86Y13 1208 aaKnown RBP19.67■□□□□ 0.74
TRIO-211ENST00000508343 PELP1Q8IZL8 1130 aaKnown RBP19.67■□□□□ 0.74
TRIO-211ENST00000508343 CFAP44Q96MT7 982 aa19.67■□□□□ 0.74
TRIO-211ENST00000508343 CAMTA2O94983 1202 aa19.66■□□□□ 0.74
TRIO-211ENST00000508343 CALD1Q05682 793 aaKnown RBP19.66■□□□□ 0.74
TRIO-211ENST00000508343 C10orf71Q711Q0 1435 aa19.65■□□□□ 0.74
TRIO-211ENST00000508343 TBC1D9BQ66K14 1250 aa19.64■□□□□ 0.73
TRIO-211ENST00000508343 BICDL1Q6ZP65 573 aa19.64■□□□□ 0.73
TRIO-211ENST00000508343 GOLGB1Q14789 3259 aaKnown RBP19.64■□□□□ 0.73
TRIO-211ENST00000508343 ERBB4Q15303 1308 aa19.63■□□□□ 0.73
TRIO-211ENST00000508343 SERPINB2P05120 415 aa19.63■□□□□ 0.73
TRIO-211ENST00000508343 ZNF853P0CG23 659 aa19.63■□□□□ 0.73
TRIO-211ENST00000508343 EIF2S2P20042 333 aaKnown RBP19.63■□□□□ 0.73
TRIO-211ENST00000508343 CLEC4GQ6UXB4 293 aa19.63■□□□□ 0.73
TRIO-211ENST00000508343 IFT57Q9NWB7 429 aa19.63■□□□□ 0.73
TRIO-211ENST00000508343 A0A0G2JLW4 131 aa19.62■□□□□ 0.73
TRIO-211ENST00000508343 RGL2O15211 777 aa19.62■□□□□ 0.73
TRIO-211ENST00000508343 GRIN3BO60391 1043 aa19.62■□□□□ 0.73
TRIO-211ENST00000508343 YBX3P16989 372 aaKnown RBP eCLIP19.62■□□□□ 0.73
TRIO-211ENST00000508343 GNAI1P63096 354 aa19.62■□□□□ 0.73
TRIO-211ENST00000508343 CCDC27Q2M243 656 aa19.62■□□□□ 0.73
TRIO-211ENST00000508343 NCBP3Q53F19 620 aaKnown RBP19.62■□□□□ 0.73
TRIO-211ENST00000508343 NGEFQ8N5V2 710 aa19.62■□□□□ 0.73
TRIO-211ENST00000508343 ZNF652Q9Y2D9 606 aa19.62■□□□□ 0.73
TRIO-211ENST00000508343 LAMB4A4D0S4 1761 aa19.62■□□□□ 0.73
TRIO-211ENST00000508343 KIF13BQ9NQT8 1826 aa19.61■□□□□ 0.73
TRIO-211ENST00000508343 MYL6BP14649 208 aa19.61■□□□□ 0.73
TRIO-211ENST00000508343 SETDB2Q96T68 719 aa19.61■□□□□ 0.73
TRIO-211ENST00000508343 MBIPQ9NS73 344 aa19.61■□□□□ 0.73
TRIO-211ENST00000508343 DPEP1P16444 411 aa19.6■□□□□ 0.73
TRIO-211ENST00000508343 KRT24Q2M2I5 525 aa19.6■□□□□ 0.73
TRIO-211ENST00000508343 FAM9BQ8IZU0 186 aa19.6■□□□□ 0.73
TRIO-211ENST00000508343 PXDNLA1KZ92 1463 aa19.6■□□□□ 0.73
TRIO-211ENST00000508343 SENP3-EIF4A1A0A087X0R7 540 aa19.59■□□□□ 0.73
TRIO-211ENST00000508343 PDIA6Q15084 440 aa19.59■□□□□ 0.73
TRIO-211ENST00000508343 WWC1Q8IX03 1113 aa19.59■□□□□ 0.73
TRIO-211ENST00000508343 SCN7AQ01118 1682 aa19.59■□□□□ 0.73
TRIO-211ENST00000508343 CARMIL3Q8ND23 1372 aa19.58■□□□□ 0.73
TRIO-211ENST00000508343 ERVV-1B6SEH8 477 aa19.58■□□□□ 0.72
TRIO-211ENST00000508343 HOXB7P09629 217 aa19.58■□□□□ 0.72
TRIO-211ENST00000508343 YY1P25490 414 aa19.58■□□□□ 0.72
TRIO-211ENST00000508343 WWC3Q9ULE0 1092 aa19.58■□□□□ 0.72
TRIO-211ENST00000508343 KCNA3P22001 575 aa19.57■□□□□ 0.72
TRIO-211ENST00000508343 HLFQ16534 295 aa19.57■□□□□ 0.72
TRIO-211ENST00000508343 KIF6Q6ZMV9 814 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms