RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 CHL1O00533 1208 aa19.57■□□□□ 0.72
RNF4-210ENST00000508235 EIF4A1P60842 406 aaKnown RBP19.57■□□□□ 0.72
RNF4-210ENST00000508235 TRAPPC3LQ5T215 181 aa19.57■□□□□ 0.72
RNF4-210ENST00000508235 MIER1Q8N108 512 aa19.57■□□□□ 0.72
RNF4-210ENST00000508235 CFAP44Q96MT7 982 aa19.57■□□□□ 0.72
RNF4-210ENST00000508235 LAS1LQ9Y4W2 734 aaKnown RBP19.57■□□□□ 0.72
RNF4-210ENST00000508235 LAMB4A4D0S4 1761 aa19.57■□□□□ 0.72
RNF4-210ENST00000508235 ZBTB7AO95365 584 aa19.56■□□□□ 0.72
RNF4-210ENST00000508235 INTS5Q6P9B9 1019 aaKnown RBP19.56■□□□□ 0.72
RNF4-210ENST00000508235 GNAI1P63096 354 aa19.55■□□□□ 0.72
RNF4-210ENST00000508235 IFT57Q9NWB7 429 aa19.55■□□□□ 0.72
RNF4-210ENST00000508235 RFC4P35249 363 aa19.54■□□□□ 0.72
RNF4-210ENST00000508235 NPM2Q86SE8 214 aaKnown RBP19.54■□□□□ 0.72
RNF4-210ENST00000508235 WWC1Q8IX03 1113 aa19.54■□□□□ 0.72
RNF4-210ENST00000508235 COL24A1Q17RW2 1714 aa19.54■□□□□ 0.72
RNF4-210ENST00000508235 GIGYF1O75420 1035 aaPredicted RBP19.53■□□□□ 0.72
RNF4-210ENST00000508235 AMIGO3Q86WK7 504 aa19.53■□□□□ 0.72
RNF4-210ENST00000508235 USP16Q9Y5T5 823 aa19.53■□□□□ 0.72
RNF4-210ENST00000508235 C4AP0C0L4 1744 aa19.53■□□□□ 0.72
RNF4-210ENST00000508235 SOS1Q07889 1333 aaPredicted RBP19.52■□□□□ 0.72
RNF4-210ENST00000508235 ARHGEF1Q92888 912 aaKnown RBP19.52■□□□□ 0.72
RNF4-210ENST00000508235 ATF5Q9Y2D1 282 aaPredicted RBP19.52■□□□□ 0.72
RNF4-210ENST00000508235 ZBTB1Q9Y2K1 713 aa19.52■□□□□ 0.72
RNF4-210ENST00000508235 A0A087WZG4 1122 aa19.51■□□□□ 0.71
RNF4-210ENST00000508235 ZNF853P0CG23 659 aa19.51■□□□□ 0.71
RNF4-210ENST00000508235 CANXP27824 592 aaKnown RBP19.51■□□□□ 0.71
RNF4-210ENST00000508235 POLD1P28340 1107 aa19.51■□□□□ 0.71
RNF4-210ENST00000508235 IL16Q14005 1332 aa19.51■□□□□ 0.71
RNF4-210ENST00000508235 COL15A1P39059 1388 aa19.5■□□□□ 0.71
RNF4-210ENST00000508235 IL6STP40189 918 aaPredicted RBP19.5■□□□□ 0.71
RNF4-210ENST00000508235 WDR63Q8IWG1 891 aa19.5■□□□□ 0.71
RNF4-210ENST00000508235 MBIPQ9NS73 344 aa19.5■□□□□ 0.71
RNF4-210ENST00000508235 PRAMEF22A3QJZ6 481 aa19.49■□□□□ 0.71
RNF4-210ENST00000508235 A1BGP04217 495 aa19.49■□□□□ 0.71
RNF4-210ENST00000508235 SMIM5Q71RC9 77 aa19.49■□□□□ 0.71
RNF4-210ENST00000508235 PPP1R1BQ9UD71 204 aaPredicted RBP19.49■□□□□ 0.71
RNF4-210ENST00000508235 SALL2Q9Y467 1007 aaPredicted RBP19.49■□□□□ 0.71
RNF4-210ENST00000508235 SENP3-EIF4A1A0A087X0R7 540 aa19.48■□□□□ 0.71
RNF4-210ENST00000508235 ZPR1O75312 459 aa19.48■□□□□ 0.71
RNF4-210ENST00000508235 HOXB7P09629 217 aa19.48■□□□□ 0.71
RNF4-210ENST00000508235 EIF5P55010 431 aaKnown RBP19.48■□□□□ 0.71
RNF4-210ENST00000508235 ERBB4Q15303 1308 aa19.48■□□□□ 0.71
RNF4-210ENST00000508235 USP42Q9H9J4 1324 aaKnown RBP19.48■□□□□ 0.71
RNF4-210ENST00000508235 PTGER2P43116 358 aa19.47■□□□□ 0.71
RNF4-210ENST00000508235 NLGN1Q8N2Q7 840 aa19.47■□□□□ 0.71
RNF4-210ENST00000508235 SGIP1Q9BQI5 828 aa19.46■□□□□ 0.71
RNF4-210ENST00000508235 NARFQ9UHQ1 456 aa19.46■□□□□ 0.71
RNF4-210ENST00000508235 ZNF330Q9Y3S2 320 aaPredicted RBP19.46■□□□□ 0.71
RNF4-210ENST00000508235 MSL1Q68DK7 614 aa19.45■□□□□ 0.7
RNF4-210ENST00000508235 CHMP4AQ9BY43 222 aa19.45■□□□□ 0.7
RNF4-210ENST00000508235 GYS1P13807 737 aa19.44■□□□□ 0.7
RNF4-210ENST00000508235 ARXQ96QS3 562 aa19.44■□□□□ 0.7
RNF4-210ENST00000508235 EIF2S2P20042 333 aaKnown RBP19.43■□□□□ 0.7
RNF4-210ENST00000508235 DUSP27Q5VZP5 1158 aa19.43■□□□□ 0.7
RNF4-210ENST00000508235 USPL1Q5W0Q7 1092 aa19.43■□□□□ 0.7
RNF4-210ENST00000508235 NBPF26B4DH59 902 aa19.42■□□□□ 0.7
RNF4-210ENST00000508235 NBPF10Q6P3W6 841 aaKnown RBP19.42■□□□□ 0.7
RNF4-210ENST00000508235 NBPF15Q8N660 670 aa19.42■□□□□ 0.7
RNF4-210ENST00000508235 MYH16Q9H6N6 1097 aa19.42■□□□□ 0.7
RNF4-210ENST00000508235 SRP68Q9UHB9 627 aaKnown RBP19.42■□□□□ 0.7
RNF4-210ENST00000508235 SCN7AQ01118 1682 aa19.42■□□□□ 0.7
RNF4-210ENST00000508235 PIP4K2AP48426 406 aaPredicted RBP19.41■□□□□ 0.7
RNF4-210ENST00000508235 KRT24Q2M2I5 525 aa19.41■□□□□ 0.7
RNF4-210ENST00000508235 HDGFL1Q5TGJ6 251 aa19.41■□□□□ 0.7
RNF4-210ENST00000508235 DZIP3Q86Y13 1208 aaKnown RBP19.41■□□□□ 0.7
RNF4-210ENST00000508235 TSR2Q969E8 191 aaKnown RBP19.41■□□□□ 0.7
RNF4-210ENST00000508235 BCORQ6W2J9 1755 aa19.41■□□□□ 0.7
RNF4-210ENST00000508235 RGL2O15211 777 aa19.4■□□□□ 0.7
RNF4-210ENST00000508235 GOLGA2Q08379 1002 aa19.4■□□□□ 0.7
RNF4-210ENST00000508235 TBC1D2BQ9UPU7 963 aa19.4■□□□□ 0.7
RNF4-210ENST00000508235 ZNF521Q96K83 1311 aa19.4■□□□□ 0.7
RNF4-210ENST00000508235 MMP10P09238 476 aa19.39■□□□□ 0.69
RNF4-210ENST00000508235 MYL6BP14649 208 aa19.39■□□□□ 0.69
RNF4-210ENST00000508235 FKBP8Q14318 412 aa19.38■□□□□ 0.69
RNF4-210ENST00000508235 KIF6Q6ZMV9 814 aa19.38■□□□□ 0.69
RNF4-210ENST00000508235 DDX21Q9NR30 783 aaKnown RBP eCLIP19.38■□□□□ 0.69
RNF4-210ENST00000508235 FANCIQ9NVI1 1328 aa19.38■□□□□ 0.69
RNF4-210ENST00000508235 DBF4Q9UBU7 674 aaPredicted RBP19.38■□□□□ 0.69
RNF4-210ENST00000508235 ZNF652Q9Y2D9 606 aa19.38■□□□□ 0.69
RNF4-210ENST00000508235 CLEC4GQ6UXB4 293 aa19.37■□□□□ 0.69
RNF4-210ENST00000508235 C8orf58Q8NAV2 365 aa19.37■□□□□ 0.69
RNF4-210ENST00000508235 NECTIN2Q92692 538 aa19.37■□□□□ 0.69
RNF4-210ENST00000508235 PARP3Q9Y6F1 533 aa19.37■□□□□ 0.69
RNF4-210ENST00000508235 ELL2O00472 640 aaPredicted RBP19.36■□□□□ 0.69
RNF4-210ENST00000508235 CAMTA2O94983 1202 aa19.36■□□□□ 0.69
RNF4-210ENST00000508235 ERVV-1B6SEH8 477 aa19.35■□□□□ 0.69
RNF4-210ENST00000508235 E9PSI1 815 aa19.35■□□□□ 0.69
RNF4-210ENST00000508235 TM4SF1P30408 202 aa19.35■□□□□ 0.69
RNF4-210ENST00000508235 PDIA6Q15084 440 aa19.35■□□□□ 0.69
RNF4-210ENST00000508235 TWISTNBQ3B726 338 aaPredicted RBP19.35■□□□□ 0.69
RNF4-210ENST00000508235 CCDC30Q5VVM6 783 aa19.35■□□□□ 0.69
RNF4-210ENST00000508235 FHDC1Q9C0D6 1143 aaPredicted RBP19.35■□□□□ 0.69
RNF4-210ENST00000508235 BCL2L12Q9HB09 334 aa19.35■□□□□ 0.69
RNF4-210ENST00000508235 CHPF2Q9P2E5 772 aa19.35■□□□□ 0.69
RNF4-210ENST00000508235 HYPKQ9NX55 129 aa19.34■□□□□ 0.69
RNF4-210ENST00000508235 MAP3K15Q6ZN16 1313 aa19.33■□□□□ 0.69
RNF4-210ENST00000508235 NFIXQ14938 502 aa19.33■□□□□ 0.68
RNF4-210ENST00000508235 KLHL34Q8N239 644 aa19.33■□□□□ 0.68
RNF4-210ENST00000508235 TSPYL6Q8N831 410 aa19.33■□□□□ 0.68
RNF4-210ENST00000508235 CD2APQ9Y5K6 639 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms