RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-210ENST00000507965 PTCH1Q13635 1447 aa8.46□□□□□ -1.06
ATXN3-210ENST00000507965 CDC42BPGQ6DT37 1551 aa8.45□□□□□ -1.06
ATXN3-210ENST00000507965 NUTM2BA6NNL0 878 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-210ENST00000507965 NUTM2EB1AL46 878 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-210ENST00000507965 VEGFBP49765 207 aa8.45□□□□□ -1.06
ATXN3-210ENST00000507965 ZNF326Q5BKZ1 582 aaKnown RBP8.45□□□□□ -1.06
ATXN3-210ENST00000507965 NUTM2AQ8IVF1 878 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-210ENST00000507965 DDX17Q92841 729 aaKnown RBP8.45□□□□□ -1.06
ATXN3-210ENST00000507965 TRIM52Q96A61 297 aa8.45□□□□□ -1.06
ATXN3-210ENST00000507965 PNPLA6Q8IY17 1366 aa8.45□□□□□ -1.06
ATXN3-210ENST00000507965 MINK1Q8N4C8 1332 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-210ENST00000507965 C1orf167Q5SNV9 1468 aa8.44□□□□□ -1.06
ATXN3-210ENST00000507965 CDK12Q9NYV4 1490 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-210ENST00000507965 ABCA3Q99758 1704 aa8.43□□□□□ -1.06
ATXN3-210ENST00000507965 FMN2Q9NZ56 1722 aa8.43□□□□□ -1.06
ATXN3-210ENST00000507965 RGPD8O14715 1765 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-210ENST00000507965 H3BM21 787 aa8.43□□□□□ -1.06
ATXN3-210ENST00000507965 TULP1O00294 542 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-210ENST00000507965 SH3BP2P78314 561 aa8.43□□□□□ -1.06
ATXN3-210ENST00000507965 GPCPD1Q9NPB8 672 aa8.43□□□□□ -1.06
ATXN3-210ENST00000507965 AFF2P51816 1311 aa8.43□□□□□ -1.06
ATXN3-210ENST00000507965 ROBO2Q9HCK4 1378 aa8.43□□□□□ -1.06
ATXN3-210ENST00000507965 PRAG1Q86YV5 1406 aa8.43□□□□□ -1.06
ATXN3-210ENST00000507965 C6orf229H3BNL8 230 aa8.42□□□□□ -1.06
ATXN3-210ENST00000507965 CCNYL3P0C7X3 344 aa8.42□□□□□ -1.06
ATXN3-210ENST00000507965 CLCN1P35523 988 aa8.42□□□□□ -1.06
ATXN3-210ENST00000507965 ZNF772Q68DY9 489 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-210ENST00000507965 KRI1Q8N9T8 703 aaKnown RBP8.42□□□□□ -1.06
ATXN3-210ENST00000507965 ZFP42Q96MM3 310 aa8.42□□□□□ -1.06
ATXN3-210ENST00000507965 HFM1A2PYH4 1435 aa8.42□□□□□ -1.06
ATXN3-210ENST00000507965 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.41□□□□□ -1.06
ATXN3-210ENST00000507965 MS4A1P11836 297 aa8.41□□□□□ -1.06
ATXN3-210ENST00000507965 FAM217BQ9NTX9 383 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-210ENST00000507965 PXDNQ92626 1479 aa8.4□□□□□ -1.06
ATXN3-210ENST00000507965 PLEKHG3A1L390 1219 aa8.4□□□□□ -1.06
ATXN3-210ENST00000507965 FDX1P10109 184 aa8.4□□□□□ -1.06
ATXN3-210ENST00000507965 LORP23490 312 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-210ENST00000507965 CCDC102AQ96A19 550 aa8.4□□□□□ -1.06
ATXN3-210ENST00000507965 C8orf37Q96NL8 207 aa8.4□□□□□ -1.06
ATXN3-210ENST00000507965 KIF1AQ12756 1690 aa8.4□□□□□ -1.07
ATXN3-210ENST00000507965 PLCH1Q4KWH8 1693 aa8.4□□□□□ -1.07
ATXN3-210ENST00000507965 ERBB4Q15303 1308 aa8.39□□□□□ -1.07
ATXN3-210ENST00000507965 BRWD3Q6RI45 1802 aa8.39□□□□□ -1.07
ATXN3-210ENST00000507965 RXRBP28702 533 aa8.39□□□□□ -1.07
ATXN3-210ENST00000507965 LINC01559Q495D7 138 aa8.39□□□□□ -1.07
ATXN3-210ENST00000507965 UNC93B1Q9H1C4 597 aa8.39□□□□□ -1.07
ATXN3-210ENST00000507965 TLL2Q9Y6L7 1015 aa8.39□□□□□ -1.07
ATXN3-210ENST00000507965 MYOM2P54296 1465 aa8.38□□□□□ -1.07
ATXN3-210ENST00000507965 PTPRNQ16849 979 aa8.38□□□□□ -1.07
ATXN3-210ENST00000507965 USP32Q8NFA0 1604 aa8.37□□□□□ -1.07
ATXN3-210ENST00000507965 ADAMTS2O95450 1211 aa8.37□□□□□ -1.07
ATXN3-210ENST00000507965 PRKCSHP14314 528 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-210ENST00000507965 SCARF1Q14162 830 aa8.37□□□□□ -1.07
ATXN3-210ENST00000507965 BAP1Q92560 729 aa8.37□□□□□ -1.07
ATXN3-210ENST00000507965 LRRC59Q96AG4 307 aaKnown RBP8.37□□□□□ -1.07
ATXN3-210ENST00000507965 ORAI2Q96SN7 254 aa8.37□□□□□ -1.07
ATXN3-210ENST00000507965 EVA1BQ9NVM1 165 aa8.37□□□□□ -1.07
ATXN3-210ENST00000507965 GLI3P10071 1580 aa8.36□□□□□ -1.07
ATXN3-210ENST00000507965 VARSP26640 1264 aaKnown RBP8.36□□□□□ -1.07
ATXN3-210ENST00000507965 NNTQ13423 1086 aa8.36□□□□□ -1.07
ATXN3-210ENST00000507965 MRPL14Q6P1L8 145 aaKnown RBP8.36□□□□□ -1.07
ATXN3-210ENST00000507965 PCDHGC3Q9UN70 934 aa8.36□□□□□ -1.07
ATXN3-210ENST00000507965 TECPR2O15040 1411 aa8.36□□□□□ -1.07
ATXN3-210ENST00000507965 SPATA31E1Q6ZUB1 1445 aa8.36□□□□□ -1.07
ATXN3-210ENST00000507965 SOS2Q07890 1332 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-210ENST00000507965 KCNH2Q12809 1159 aa8.35□□□□□ -1.07
ATXN3-210ENST00000507965 PURBQ96QR8 312 aaKnown RBP8.35□□□□□ -1.07
ATXN3-210ENST00000507965 CCDC144AA2RUR9 1427 aa8.35□□□□□ -1.07
ATXN3-210ENST00000507965 PIK3C2GO75747 1445 aa8.35□□□□□ -1.07
ATXN3-210ENST00000507965 ATRNO75882 1429 aa8.35□□□□□ -1.07
ATXN3-210ENST00000507965 PLEKHH1Q9ULM0 1364 aa8.35□□□□□ -1.07
ATXN3-210ENST00000507965 NRAPQ86VF7 1730 aa8.34□□□□□ -1.07
ATXN3-210ENST00000507965 NWD2Q9ULI1 1742 aa8.34□□□□□ -1.07
ATXN3-210ENST00000507965 CRYBG1Q9Y4K1 1723 aa8.34□□□□□ -1.07
ATXN3-210ENST00000507965 ADGRF5Q8IZF2 1346 aa8.34□□□□□ -1.07
ATXN3-210ENST00000507965 WDR4P57081 412 aaKnown RBP8.34□□□□□ -1.07
ATXN3-210ENST00000507965 ZNF511Q8NB15 262 aa8.34□□□□□ -1.07
ATXN3-210ENST00000507965 QTRT2Q9H974 415 aaKnown RBP8.34□□□□□ -1.07
ATXN3-210ENST00000507965 TRPM3Q9HCF6 1732 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-210ENST00000507965 BCL9LQ86UU0 1499 aa8.33□□□□□ -1.08
ATXN3-210ENST00000507965 ADH1CP00326 375 aa8.33□□□□□ -1.08
ATXN3-210ENST00000507965 RBM6P78332 1123 aaKnown RBP8.33□□□□□ -1.08
ATXN3-210ENST00000507965 XPCQ01831 940 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-210ENST00000507965 MPNDQ8N594 471 aa8.33□□□□□ -1.08
ATXN3-210ENST00000507965 NGLY1Q96IV0 654 aa8.33□□□□□ -1.08
ATXN3-210ENST00000507965 RPGRIP1LQ68CZ1 1315 aa8.32□□□□□ -1.08
ATXN3-210ENST00000507965 ADGRB2O60241 1585 aa8.32□□□□□ -1.08
ATXN3-210ENST00000507965 TIMP2P16035 220 aa8.32□□□□□ -1.08
ATXN3-210ENST00000507965 PRR7Q8TB68 274 aa8.32□□□□□ -1.08
ATXN3-210ENST00000507965 USP21Q9UK80 565 aa8.32□□□□□ -1.08
ATXN3-210ENST00000507965 ALS2Q96Q42 1657 aa8.32□□□□□ -1.08
ATXN3-210ENST00000507965 LRPPRCP42704 1394 aaKnown RBP8.32□□□□□ -1.08
ATXN3-210ENST00000507965 ATAD2Q6PL18 1390 aa8.32□□□□□ -1.08
ATXN3-210ENST00000507965 YTHDC2Q9H6S0 1430 aaKnown RBP8.31□□□□□ -1.08
ATXN3-210ENST00000507965 SOBPA7XYQ1 873 aa8.31□□□□□ -1.08
ATXN3-210ENST00000507965 NDUFV2P19404 249 aa8.31□□□□□ -1.08
ATXN3-210ENST00000507965 SSTR3P32745 418 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-210ENST00000507965 ESCO1Q5FWF5 840 aa8.31□□□□□ -1.08
ATXN3-210ENST00000507965 WAPLQ7Z5K2 1190 aa8.31□□□□□ -1.08
ATXN3-210ENST00000507965 SPIRE2Q8WWL2 714 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms