RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 LRRC4BQ9NT99 713 aa17.52■□□□□ 0.4
UBE2D3-221ENST00000507845 KCNQ4P56696 695 aa17.51■□□□□ 0.39
UBE2D3-221ENST00000507845 TSR2Q969E8 191 aaKnown RBP17.51■□□□□ 0.39
UBE2D3-221ENST00000507845 ZBTB12Q9Y330 459 aaPredicted RBP17.51■□□□□ 0.39
UBE2D3-221ENST00000507845 MYH14Q7Z406 1995 aaKnown RBP17.51■□□□□ 0.39
UBE2D3-221ENST00000507845 FANCIQ9NVI1 1328 aa17.5■□□□□ 0.39
UBE2D3-221ENST00000507845 ATP6V1AP38606 617 aa17.5■□□□□ 0.39
UBE2D3-221ENST00000507845 ITPK1Q13572 414 aa17.5■□□□□ 0.39
UBE2D3-221ENST00000507845 VSIG10Q8N0Z9 540 aa17.5■□□□□ 0.39
UBE2D3-221ENST00000507845 C4BP0C0L5 1744 aa17.5■□□□□ 0.39
UBE2D3-221ENST00000507845 E9PSI1 815 aa17.49■□□□□ 0.39
UBE2D3-221ENST00000507845 SLFN5Q08AF3 891 aa17.49■□□□□ 0.39
UBE2D3-221ENST00000507845 CDCA7LQ96GN5 454 aa17.49■□□□□ 0.39
UBE2D3-221ENST00000507845 MYH16Q9H6N6 1097 aa17.49■□□□□ 0.39
UBE2D3-221ENST00000507845 KRT24Q2M2I5 525 aa17.48■□□□□ 0.39
UBE2D3-221ENST00000507845 DNAJC10Q8IXB1 793 aa17.48■□□□□ 0.39
UBE2D3-221ENST00000507845 TUBGCP6Q96RT7 1819 aa17.47■□□□□ 0.39
UBE2D3-221ENST00000507845 PRAMEF22A3QJZ6 481 aa17.47■□□□□ 0.39
UBE2D3-221ENST00000507845 GIGYF1O75420 1035 aaPredicted RBP17.47■□□□□ 0.39
UBE2D3-221ENST00000507845 SNRPA1P09661 255 aaKnown RBP17.47■□□□□ 0.39
UBE2D3-221ENST00000507845 TRMT2AQ8IZ69 625 aaKnown RBP17.47■□□□□ 0.39
UBE2D3-221ENST00000507845 LINC00116Q8NCU8 138 aa17.47■□□□□ 0.39
UBE2D3-221ENST00000507845 YTHDC1Q96MU7 727 aaKnown RBP17.47■□□□□ 0.39
UBE2D3-221ENST00000507845 UBR3Q6ZT12 1888 aa17.46■□□□□ 0.39
UBE2D3-221ENST00000507845 CYP19A1P11511 503 aaPredicted RBP17.45■□□□□ 0.38
UBE2D3-221ENST00000507845 C8orf58Q8NAV2 365 aa17.45■□□□□ 0.38
UBE2D3-221ENST00000507845 TEX13AQ9BXU3 409 aaPredicted RBP17.45■□□□□ 0.38
UBE2D3-221ENST00000507845 QSER1Q2KHR3 1735 aa17.44■□□□□ 0.38
UBE2D3-221ENST00000507845 DUSP27Q5VZP5 1158 aa17.44■□□□□ 0.38
UBE2D3-221ENST00000507845 USP16Q9Y5T5 823 aa17.44■□□□□ 0.38
UBE2D3-221ENST00000507845 HOXB7P09629 217 aa17.43■□□□□ 0.38
UBE2D3-221ENST00000507845 EXOSC9Q06265 439 aaKnown RBP17.43■□□□□ 0.38
UBE2D3-221ENST00000507845 TSPYL6Q8N831 410 aa17.43■□□□□ 0.38
UBE2D3-221ENST00000507845 CNTNAP4Q9C0A0 1308 aa17.43■□□□□ 0.38
UBE2D3-221ENST00000507845 STARD3NLO95772 234 aa17.42■□□□□ 0.38
UBE2D3-221ENST00000507845 HMGB2P26583 209 aaKnown RBP17.42■□□□□ 0.38
UBE2D3-221ENST00000507845 CRKLP46109 303 aaKnown RBP17.42■□□□□ 0.38
UBE2D3-221ENST00000507845 RC3H1Q5TC82 1133 aaKnown RBP17.42■□□□□ 0.38
UBE2D3-221ENST00000507845 AKT1S1Q96B36 256 aa17.42■□□□□ 0.38
UBE2D3-221ENST00000507845 ANO8Q9HCE9 1232 aaPredicted RBP17.42■□□□□ 0.38
UBE2D3-221ENST00000507845 CACNA1FO60840 1977 aa17.41■□□□□ 0.38
UBE2D3-221ENST00000507845 ELL2O00472 640 aaPredicted RBP17.41■□□□□ 0.38
UBE2D3-221ENST00000507845 ZNF827Q17R98 1081 aa17.41■□□□□ 0.38
UBE2D3-221ENST00000507845 INTS5Q6P9B9 1019 aaKnown RBP17.41■□□□□ 0.38
UBE2D3-221ENST00000507845 SOS1Q07889 1333 aaPredicted RBP17.41■□□□□ 0.38
UBE2D3-221ENST00000507845 TWISTNBQ3B726 338 aaPredicted RBP17.4■□□□□ 0.38
UBE2D3-221ENST00000507845 CCDC87Q9NVE4 849 aa17.4■□□□□ 0.38
UBE2D3-221ENST00000507845 A1BGP04217 495 aa17.39■□□□□ 0.37
UBE2D3-221ENST00000507845 EIF2S2P20042 333 aaKnown RBP17.39■□□□□ 0.37
UBE2D3-221ENST00000507845 AK7Q96M32 723 aa17.39■□□□□ 0.37
UBE2D3-221ENST00000507845 STK32BQ9NY57 414 aa17.39■□□□□ 0.37
UBE2D3-221ENST00000507845 VAMP4O75379 141 aa17.38■□□□□ 0.37
UBE2D3-221ENST00000507845 SLC15A2Q16348 729 aa17.38■□□□□ 0.37
UBE2D3-221ENST00000507845 HDGFL1Q5TGJ6 251 aa17.38■□□□□ 0.37
UBE2D3-221ENST00000507845 NBPF14Q5TI25 921 aa17.38■□□□□ 0.37
UBE2D3-221ENST00000507845 ZBTB1Q9Y2K1 713 aa17.38■□□□□ 0.37
UBE2D3-221ENST00000507845 C4AP0C0L4 1744 aa17.38■□□□□ 0.37
UBE2D3-221ENST00000507845 NBPF26B4DH59 902 aa17.37■□□□□ 0.37
UBE2D3-221ENST00000507845 GNPATO15228 680 aa17.37■□□□□ 0.37
UBE2D3-221ENST00000507845 NBPF10Q6P3W6 841 aaKnown RBP17.37■□□□□ 0.37
UBE2D3-221ENST00000507845 AMIGO3Q86WK7 504 aa17.37■□□□□ 0.37
UBE2D3-221ENST00000507845 NBPF15Q8N660 670 aa17.37■□□□□ 0.37
UBE2D3-221ENST00000507845 NECTIN2Q92692 538 aa17.37■□□□□ 0.37
UBE2D3-221ENST00000507845 ERBB4Q15303 1308 aa17.37■□□□□ 0.37
UBE2D3-221ENST00000507845 RPS6KA4O75676 772 aa17.36■□□□□ 0.37
UBE2D3-221ENST00000507845 CANXP27824 592 aaKnown RBP17.36■□□□□ 0.37
UBE2D3-221ENST00000507845 PIP4K2AP48426 406 aaPredicted RBP17.36■□□□□ 0.37
UBE2D3-221ENST00000507845 PDIA6Q15084 440 aa17.35■□□□□ 0.37
UBE2D3-221ENST00000507845 SMIM5Q71RC9 77 aa17.35■□□□□ 0.37
UBE2D3-221ENST00000507845 TFCP2L1Q9NZI6 479 aa17.35■□□□□ 0.37
UBE2D3-221ENST00000507845 IL6STP40189 918 aaPredicted RBP17.34■□□□□ 0.37
UBE2D3-221ENST00000507845 EIF5P55010 431 aaKnown RBP17.34■□□□□ 0.37
UBE2D3-221ENST00000507845 PROSER3Q2NL68 480 aa17.34■□□□□ 0.37
UBE2D3-221ENST00000507845 CCDC30Q5VVM6 783 aa17.34■□□□□ 0.37
UBE2D3-221ENST00000507845 CASZ1Q86V15 1759 aa17.34■□□□□ 0.37
UBE2D3-221ENST00000507845 CHMP4AQ9BY43 222 aa17.34■□□□□ 0.37
UBE2D3-221ENST00000507845 CHPF2Q9P2E5 772 aa17.34■□□□□ 0.37
UBE2D3-221ENST00000507845 RTCBQ9Y3I0 505 aaKnown RBP17.34■□□□□ 0.37
UBE2D3-221ENST00000507845 PNPLA7Q6ZV29 1317 aa17.33■□□□□ 0.36
UBE2D3-221ENST00000507845 SSFA2P28290 1259 aa17.33■□□□□ 0.36
UBE2D3-221ENST00000507845 LRP10Q7Z4F1 713 aa17.33■□□□□ 0.36
UBE2D3-221ENST00000507845 DDX21Q9NR30 783 aaKnown RBP eCLIP17.33■□□□□ 0.36
UBE2D3-221ENST00000507845 BCORQ6W2J9 1755 aa17.33■□□□□ 0.36
UBE2D3-221ENST00000507845 COL15A1P39059 1388 aa17.32■□□□□ 0.36
UBE2D3-221ENST00000507845 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.32■□□□□ 0.36
UBE2D3-221ENST00000507845 PHF14O94880 888 aa17.32■□□□□ 0.36
UBE2D3-221ENST00000507845 ANXA1P04083 346 aa17.32■□□□□ 0.36
UBE2D3-221ENST00000507845 CT47B1P0C2W7 299 aaPredicted RBP17.32■□□□□ 0.36
UBE2D3-221ENST00000507845 MYL6BP14649 208 aa17.32■□□□□ 0.36
UBE2D3-221ENST00000507845 DBF4Q9UBU7 674 aaPredicted RBP17.32■□□□□ 0.36
UBE2D3-221ENST00000507845 TCERG1O14776 1098 aaKnown RBP17.31■□□□□ 0.36
UBE2D3-221ENST00000507845 R3HDM1Q15032 1099 aaKnown RBP17.31■□□□□ 0.36
UBE2D3-221ENST00000507845 SCN7AQ01118 1682 aa17.31■□□□□ 0.36
UBE2D3-221ENST00000507845 MKRN4PQ13434 485 aaPredicted RBP17.3■□□□□ 0.36
UBE2D3-221ENST00000507845 TRAPPC3LQ5T215 181 aa17.3■□□□□ 0.36
UBE2D3-221ENST00000507845 COL23A1Q86Y22 540 aaPredicted RBP17.3■□□□□ 0.36
UBE2D3-221ENST00000507845 FLAD1Q8NFF5 587 aa17.3■□□□□ 0.36
UBE2D3-221ENST00000507845 ARHGEF1Q92888 912 aaKnown RBP17.3■□□□□ 0.36
UBE2D3-221ENST00000507845 ZNF428Q96B54 188 aa17.3■□□□□ 0.36
UBE2D3-221ENST00000507845 STK31Q9BXU1 1019 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms