RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 COL5A2P05997 1499 aaPredicted RBP21.89■■□□□ 1.09
SFXN1-208ENST00000507823 SMARCA5O60264 1052 aaPredicted RBP21.89■■□□□ 1.09
SFXN1-208ENST00000507823 HSP90AB1P08238 724 aaKnown RBP21.89■■□□□ 1.09
SFXN1-208ENST00000507823 DDX21Q9NR30 783 aaKnown RBP eCLIP21.88■■□□□ 1.09
SFXN1-208ENST00000507823 ALDH1L1O75891 902 aa21.87■■□□□ 1.09
SFXN1-208ENST00000507823 GLI3P10071 1580 aa21.87■■□□□ 1.09
SFXN1-208ENST00000507823 PDIA6Q15084 440 aa21.87■■□□□ 1.09
SFXN1-208ENST00000507823 KSR2Q6VAB6 950 aa21.87■■□□□ 1.09
SFXN1-208ENST00000507823 PROSER3Q2NL68 480 aa21.86■■□□□ 1.09
SFXN1-208ENST00000507823 LRRCC1Q9C099 1032 aa21.86■■□□□ 1.09
SFXN1-208ENST00000507823 PRAMEF22A3QJZ6 481 aa21.85■■□□□ 1.09
SFXN1-208ENST00000507823 ANTXR1Q9H6X2 564 aa21.85■■□□□ 1.09
SFXN1-208ENST00000507823 ANXA1P04083 346 aa21.84■■□□□ 1.09
SFXN1-208ENST00000507823 PDE1AP54750 535 aa21.84■■□□□ 1.09
SFXN1-208ENST00000507823 MTX1Q13505 466 aa21.84■■□□□ 1.09
SFXN1-208ENST00000507823 SNX21Q969T3 373 aa21.84■■□□□ 1.09
SFXN1-208ENST00000507823 EXOC6BQ9Y2D4 811 aa21.84■■□□□ 1.09
SFXN1-208ENST00000507823 NFATC2IPQ8NCF5 419 aa21.84■■□□□ 1.09
SFXN1-208ENST00000507823 PRDM11Q9NQV5 511 aa21.84■■□□□ 1.09
SFXN1-208ENST00000507823 SDSP20132 328 aa21.83■■□□□ 1.09
SFXN1-208ENST00000507823 KIF2CQ99661 725 aa21.83■■□□□ 1.09
SFXN1-208ENST00000507823 STAP2Q9UGK3 403 aa21.83■■□□□ 1.09
SFXN1-208ENST00000507823 RAB11FIP3O75154 756 aa21.83■■□□□ 1.08
SFXN1-208ENST00000507823 RTL5Q5HYW3 569 aaPredicted RBP21.83■■□□□ 1.08
SFXN1-208ENST00000507823 LAMB4A4D0S4 1761 aa21.82■■□□□ 1.08
SFXN1-208ENST00000507823 NBPF7P0C2Y1 421 aaPredicted RBP21.82■■□□□ 1.08
SFXN1-208ENST00000507823 UTYO14607 1347 aa21.82■■□□□ 1.08
SFXN1-208ENST00000507823 SHANK3Q9BYB0 1731 aa21.82■■□□□ 1.08
SFXN1-208ENST00000507823 MAP3K2Q9Y2U5 619 aa21.82■■□□□ 1.08
SFXN1-208ENST00000507823 AOX1Q06278 1338 aa21.82■■□□□ 1.08
SFXN1-208ENST00000507823 SLC39A6Q13433 755 aa21.81■■□□□ 1.08
SFXN1-208ENST00000507823 PPP1R42Q7Z4L9 355 aa21.81■■□□□ 1.08
SFXN1-208ENST00000507823 CARD10Q9BWT7 1032 aa21.81■■□□□ 1.08
SFXN1-208ENST00000507823 UBR2Q8IWV8 1755 aa21.8■■□□□ 1.08
SFXN1-208ENST00000507823 APBB1O00213 710 aa21.8■■□□□ 1.08
SFXN1-208ENST00000507823 DDX58O95786 925 aaKnown RBP21.8■■□□□ 1.08
SFXN1-208ENST00000507823 PAPPAQ13219 1627 aa21.8■■□□□ 1.08
SFXN1-208ENST00000507823 NKX1-1Q15270 411 aaPredicted RBP21.8■■□□□ 1.08
SFXN1-208ENST00000507823 NFKBIBQ15653 356 aa21.8■■□□□ 1.08
SFXN1-208ENST00000507823 LRP10Q7Z4F1 713 aa21.8■■□□□ 1.08
SFXN1-208ENST00000507823 LINS1Q8NG48 757 aa21.8■■□□□ 1.08
SFXN1-208ENST00000507823 ZNF496Q96IT1 587 aaPredicted RBP21.8■■□□□ 1.08
SFXN1-208ENST00000507823 PCDH11XQ9BZA7 1347 aa21.79■■□□□ 1.08
SFXN1-208ENST00000507823 PCDH11YQ9BZA8 1340 aa21.79■■□□□ 1.08
SFXN1-208ENST00000507823 HDAC5Q9UQL6 1122 aa21.79■■□□□ 1.08
SFXN1-208ENST00000507823 SNRPA1P09661 255 aaKnown RBP21.78■■□□□ 1.08
SFXN1-208ENST00000507823 MX1P20591 662 aa21.77■■□□□ 1.08
SFXN1-208ENST00000507823 ZCRB1Q8TBF4 217 aaKnown RBP21.77■■□□□ 1.08
SFXN1-208ENST00000507823 FMNL2Q96PY5 1086 aa21.77■■□□□ 1.08
SFXN1-208ENST00000507823 ERVV-2B6SEH9 535 aa21.76■■□□□ 1.07
SFXN1-208ENST00000507823 TOM1L2Q6ZVM7 507 aa21.76■■□□□ 1.07
SFXN1-208ENST00000507823 USP26Q9BXU7 913 aa21.76■■□□□ 1.07
SFXN1-208ENST00000507823 SRGAP3O43295 1099 aa21.75■■□□□ 1.07
SFXN1-208ENST00000507823 CABP4P57796 275 aa21.75■■□□□ 1.07
SFXN1-208ENST00000507823 HSP90AB4PQ58FF6 505 aa21.75■■□□□ 1.07
SFXN1-208ENST00000507823 CASC1Q6TDU7 716 aa21.75■■□□□ 1.07
SFXN1-208ENST00000507823 TTC5Q8N0Z6 440 aa21.75■■□□□ 1.07
SFXN1-208ENST00000507823 LARP1Q6PKG0 1096 aaKnown RBP21.74■■□□□ 1.07
SFXN1-208ENST00000507823 ERBB4Q15303 1308 aa21.74■■□□□ 1.07
SFXN1-208ENST00000507823 IL2RBP14784 551 aa21.74■■□□□ 1.07
SFXN1-208ENST00000507823 HSCBQ8IWL3 235 aa21.74■■□□□ 1.07
SFXN1-208ENST00000507823 KIF1BPQ96EK5 621 aa21.74■■□□□ 1.07
SFXN1-208ENST00000507823 RHPN1Q8TCX5 695 aa21.73■■□□□ 1.07
SFXN1-208ENST00000507823 COL22A1Q8NFW1 1626 aaPredicted RBP21.73■■□□□ 1.07
SFXN1-208ENST00000507823 GRM8O00222 908 aa21.73■■□□□ 1.07
SFXN1-208ENST00000507823 SURF6O75683 361 aaKnown RBP21.73■■□□□ 1.07
SFXN1-208ENST00000507823 KCPQ6ZWJ8 1503 aa21.73■■□□□ 1.07
SFXN1-208ENST00000507823 USP42Q9H9J4 1324 aaKnown RBP21.72■■□□□ 1.07
SFXN1-208ENST00000507823 AHDC1Q5TGY3 1603 aaPredicted RBP21.72■■□□□ 1.07
SFXN1-208ENST00000507823 USP16Q9Y5T5 823 aa21.72■■□□□ 1.07
SFXN1-208ENST00000507823 TNS2Q63HR2 1409 aa21.72■■□□□ 1.07
SFXN1-208ENST00000507823 IGKV5-2P06315 115 aa21.72■■□□□ 1.07
SFXN1-208ENST00000507823 CWF19L2Q2TBE0 894 aaKnown RBP21.72■■□□□ 1.07
SFXN1-208ENST00000507823 C9orf78Q9NZ63 289 aaPredicted RBP21.72■■□□□ 1.07
SFXN1-208ENST00000507823 COL15A1P39059 1388 aa21.71■■□□□ 1.07
SFXN1-208ENST00000507823 METTL22Q9BUU2 404 aaPredicted RBP21.71■■□□□ 1.07
SFXN1-208ENST00000507823 XAGE3Q8WTP9 111 aa21.71■■□□□ 1.07
SFXN1-208ENST00000507823 KAZALD1Q96I82 304 aa21.71■■□□□ 1.07
SFXN1-208ENST00000507823 DDIT3P35638 169 aa21.7■■□□□ 1.06
SFXN1-208ENST00000507823 ARFGEF2Q9Y6D5 1785 aa21.7■■□□□ 1.06
SFXN1-208ENST00000507823 ERC2O15083 957 aa21.7■■□□□ 1.06
SFXN1-208ENST00000507823 REC8O95072 547 aa21.7■■□□□ 1.06
SFXN1-208ENST00000507823 COL14A1Q05707 1796 aaKnown RBP21.69■■□□□ 1.06
SFXN1-208ENST00000507823 SLKQ9H2G2 1235 aaPredicted RBP21.69■■□□□ 1.06
SFXN1-208ENST00000507823 NEURL1BA8MQ27 555 aa21.69■■□□□ 1.06
SFXN1-208ENST00000507823 COPS6Q7L5N1 327 aa21.69■■□□□ 1.06
SFXN1-208ENST00000507823 RIC3Q7Z5B4 369 aa21.69■■□□□ 1.06
SFXN1-208ENST00000507823 TOGARAM1Q9Y4F4 1720 aa21.68■■□□□ 1.06
SFXN1-208ENST00000507823 AIMP1Q12904 312 aaKnown RBP21.67■■□□□ 1.06
SFXN1-208ENST00000507823 RABEP1Q15276 862 aa21.67■■□□□ 1.06
SFXN1-208ENST00000507823 SUCLG2Q96I99 432 aa21.67■■□□□ 1.06
SFXN1-208ENST00000507823 ANKRD13DQ6ZTN6 518 aa21.67■■□□□ 1.06
SFXN1-208ENST00000507823 PI4K2BQ8TCG2 481 aa21.67■■□□□ 1.06
SFXN1-208ENST00000507823 IL1RAPL2Q9NP60 686 aa21.67■■□□□ 1.06
SFXN1-208ENST00000507823 ROBO1Q9Y6N7 1651 aa21.67■■□□□ 1.06
SFXN1-208ENST00000507823 MYL6BP14649 208 aa21.66■■□□□ 1.06
SFXN1-208ENST00000507823 NEXNQ0ZGT2 675 aa21.66■■□□□ 1.06
SFXN1-208ENST00000507823 GCKRQ14397 625 aa21.66■■□□□ 1.06
SFXN1-208ENST00000507823 TSHZ3Q63HK5 1081 aa21.66■■□□□ 1.06
SFXN1-208ENST00000507823 ERC1Q8IUD2 1116 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms