RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 MMP10P09238 476 aa8.53□□□□□ -1.04
GYPB-204ENST00000504951 TMF1P82094 1093 aa8.53□□□□□ -1.04
GYPB-204ENST00000504951 C9orf131Q5VYM1 1079 aa8.53□□□□□ -1.04
GYPB-204ENST00000504951 MPRIPQ6WCQ1 1025 aa8.53□□□□□ -1.04
GYPB-204ENST00000504951 LTV1Q96GA3 475 aaPredicted RBP8.53□□□□□ -1.04
GYPB-204ENST00000504951 DCAF5Q96JK2 942 aa8.53□□□□□ -1.04
GYPB-204ENST00000504951 TMEM121BQ9BXQ6 578 aaPredicted RBP8.53□□□□□ -1.04
GYPB-204ENST00000504951 CCDC87Q9NVE4 849 aa8.53□□□□□ -1.04
GYPB-204ENST00000504951 WWC3Q9ULE0 1092 aa8.53□□□□□ -1.04
GYPB-204ENST00000504951 BCS1LQ9Y276 419 aa8.53□□□□□ -1.04
GYPB-204ENST00000504951 KIAA1551Q9HCM1 1747 aa8.53□□□□□ -1.04
GYPB-204ENST00000504951 A0A0G2JLW4 131 aa8.52□□□□□ -1.05
GYPB-204ENST00000504951 GOLGA2Q08379 1002 aa8.52□□□□□ -1.05
GYPB-204ENST00000504951 TRAPPC3LQ5T215 181 aa8.52□□□□□ -1.05
GYPB-204ENST00000504951 LINC00116Q8NCU8 138 aa8.52□□□□□ -1.05
GYPB-204ENST00000504951 PIM2Q9P1W9 311 aa8.52□□□□□ -1.05
GYPB-204ENST00000504951 PCDHB8Q9UN66 801 aa8.52□□□□□ -1.05
GYPB-204ENST00000504951 NCAPD2Q15021 1401 aa8.52□□□□□ -1.05
GYPB-204ENST00000504951 FCHSD2O94868 740 aa8.51□□□□□ -1.05
GYPB-204ENST00000504951 HSPA1AP0DMV8 641 aaKnown RBP8.51□□□□□ -1.05
GYPB-204ENST00000504951 HSPA1BP0DMV9 641 aaKnown RBP8.51□□□□□ -1.05
GYPB-204ENST00000504951 DPEP1P16444 411 aa8.51□□□□□ -1.05
GYPB-204ENST00000504951 TMC1Q8TDI8 760 aa8.51□□□□□ -1.05
GYPB-204ENST00000504951 PRDM10Q9NQV6 1147 aa8.51□□□□□ -1.05
GYPB-204ENST00000504951 ARFGEF1Q9Y6D6 1849 aa8.51□□□□□ -1.05
GYPB-204ENST00000504951 KDM6AO15550 1401 aaPredicted RBP8.51□□□□□ -1.05
GYPB-204ENST00000504951 BRCA1P38398 1863 aaKnown RBP8.51□□□□□ -1.05
GYPB-204ENST00000504951 TONSLQ96HA7 1378 aa8.5□□□□□ -1.05
GYPB-204ENST00000504951 ZNF831Q5JPB2 1677 aa8.5□□□□□ -1.05
GYPB-204ENST00000504951 VEGFAP15692 232 aaPredicted RBP8.5□□□□□ -1.05
GYPB-204ENST00000504951 HTRA3P83110 453 aa8.5□□□□□ -1.05
GYPB-204ENST00000504951 ITPK1Q13572 414 aa8.5□□□□□ -1.05
GYPB-204ENST00000504951 SMG6Q86US8 1419 aaKnown RBP8.5□□□□□ -1.05
GYPB-204ENST00000504951 RRAGCQ9HB90 399 aa8.5□□□□□ -1.05
GYPB-204ENST00000504951 RTCBQ9Y3I0 505 aaKnown RBP8.5□□□□□ -1.05
GYPB-204ENST00000504951 GLTPD2A6NH11 291 aa8.49□□□□□ -1.05
GYPB-204ENST00000504951 FYB1O15117 783 aa8.49□□□□□ -1.05
GYPB-204ENST00000504951 GNPATO15228 680 aa8.49□□□□□ -1.05
GYPB-204ENST00000504951 RPS6KA4O75676 772 aa8.49□□□□□ -1.05
GYPB-204ENST00000504951 PHF14O94880 888 aa8.49□□□□□ -1.05
GYPB-204ENST00000504951 GYS1P13807 737 aa8.49□□□□□ -1.05
GYPB-204ENST00000504951 ATP6V1AP38606 617 aa8.49□□□□□ -1.05
GYPB-204ENST00000504951 VASPP50552 380 aaPredicted RBP8.49□□□□□ -1.05
GYPB-204ENST00000504951 MKRN3Q13064 507 aaKnown RBP8.49□□□□□ -1.05
GYPB-204ENST00000504951 DALRD3Q5D0E6 543 aaKnown RBP8.49□□□□□ -1.05
GYPB-204ENST00000504951 SPG7Q9UQ90 795 aa8.49□□□□□ -1.05
GYPB-204ENST00000504951 ITGB4P16144 1822 aa8.49□□□□□ -1.05
GYPB-204ENST00000504951 TNRC6CQ9HCJ0 1690 aaKnown RBP8.49□□□□□ -1.05
GYPB-204ENST00000504951 CNTNAP4Q9C0A0 1308 aa8.49□□□□□ -1.05
GYPB-204ENST00000504951 RGPD2P0DJD1 1756 aa8.48□□□□□ -1.05
GYPB-204ENST00000504951 CHRM1P11229 460 aaPredicted RBP8.48□□□□□ -1.05
GYPB-204ENST00000504951 ARHGEF1Q92888 912 aaKnown RBP8.48□□□□□ -1.05
GYPB-204ENST00000504951 SIN3AQ96ST3 1273 aa8.48□□□□□ -1.05
GYPB-204ENST00000504951 PARP3Q9Y6F1 533 aa8.48□□□□□ -1.05
GYPB-204ENST00000504951 KCPQ6ZWJ8 1503 aa8.48□□□□□ -1.05
GYPB-204ENST00000504951 FLT4P35916 1363 aa8.48□□□□□ -1.05
GYPB-204ENST00000504951 SBF1O95248 1867 aa8.47□□□□□ -1.05
GYPB-204ENST00000504951 PKD1L3Q7Z443 1732 aa8.47□□□□□ -1.05
GYPB-204ENST00000504951 ERVV-2B6SEH9 535 aa8.47□□□□□ -1.05
GYPB-204ENST00000504951 C3orf67Q6ZVT6 689 aa8.47□□□□□ -1.05
GYPB-204ENST00000504951 L3MBTL3Q96JM7 780 aaPredicted RBP8.47□□□□□ -1.05
GYPB-204ENST00000504951 ATG3Q9NT62 314 aa8.47□□□□□ -1.05
GYPB-204ENST00000504951 TMOD3Q9NYL9 352 aa8.47□□□□□ -1.05
GYPB-204ENST00000504951 RNF181Q9P0P0 153 aa8.47□□□□□ -1.05
GYPB-204ENST00000504951 ASAP1Q9ULH1 1129 aa8.47□□□□□ -1.05
GYPB-204ENST00000504951 N4BP2Q86UW6 1770 aaPredicted RBP8.47□□□□□ -1.05
GYPB-204ENST00000504951 KDRP35968 1356 aa8.47□□□□□ -1.05
GYPB-204ENST00000504951 C4AP0C0L4 1744 aa8.46□□□□□ -1.05
GYPB-204ENST00000504951 LMNB1P20700 586 aa8.46□□□□□ -1.06
GYPB-204ENST00000504951 FBLN1P23142 703 aa8.46□□□□□ -1.06
GYPB-204ENST00000504951 TM4SF1P30408 202 aa8.46□□□□□ -1.06
GYPB-204ENST00000504951 RFC4P35249 363 aa8.46□□□□□ -1.06
GYPB-204ENST00000504951 RGS19P49795 217 aa8.46□□□□□ -1.06
GYPB-204ENST00000504951 RRS1Q15050 365 aaKnown RBP8.46□□□□□ -1.06
GYPB-204ENST00000504951 HSP90AB2PQ58FF8 381 aa8.46□□□□□ -1.06
GYPB-204ENST00000504951 SMIM5Q71RC9 77 aa8.46□□□□□ -1.06
GYPB-204ENST00000504951 IFNL2Q8IZJ0 200 aa8.46□□□□□ -1.06
GYPB-204ENST00000504951 TESK2Q96S53 571 aa8.46□□□□□ -1.06
GYPB-204ENST00000504951 POTECB2RU33 542 aa8.45□□□□□ -1.06
GYPB-204ENST00000504951 PHKG2P15735 406 aa8.45□□□□□ -1.06
GYPB-204ENST00000504951 USHBP1Q8N6Y0 703 aa8.45□□□□□ -1.06
GYPB-204ENST00000504951 SLC4A9Q96Q91 983 aa8.45□□□□□ -1.06
GYPB-204ENST00000504951 CARD11Q9BXL7 1154 aa8.45□□□□□ -1.06
GYPB-204ENST00000504951 WASHC2AQ641Q2 1341 aa8.45□□□□□ -1.06
GYPB-204ENST00000504951 HSP90AB1P08238 724 aaKnown RBP8.44□□□□□ -1.06
GYPB-204ENST00000504951 CTCFP49711 727 aaPredicted RBP8.43□□□□□ -1.06
GYPB-204ENST00000504951 NEUROD1Q13562 356 aa8.43□□□□□ -1.06
GYPB-204ENST00000504951 DPY19L2Q6NUT2 758 aa8.43□□□□□ -1.06
GYPB-204ENST00000504951 PDCD7Q8N8D1 485 aaKnown RBP8.43□□□□□ -1.06
GYPB-204ENST00000504951 PDZRN3Q9UPQ7 1066 aa8.43□□□□□ -1.06
GYPB-204ENST00000504951 USP42Q9H9J4 1324 aaKnown RBP8.43□□□□□ -1.06
GYPB-204ENST00000504951 CNTNAP1P78357 1384 aa8.41□□□□□ -1.06
GYPB-204ENST00000504951 POLRMTO00411 1230 aaKnown RBP8.41□□□□□ -1.06
GYPB-204ENST00000504951 FOXN1O15353 648 aa8.41□□□□□ -1.06
GYPB-204ENST00000504951 PSEN1P49768 467 aa8.41□□□□□ -1.06
GYPB-204ENST00000504951 DDR1Q08345 913 aa8.41□□□□□ -1.06
GYPB-204ENST00000504951 EYA1Q99502 592 aa8.41□□□□□ -1.06
GYPB-204ENST00000504951 GGNBP2Q9H3C7 697 aa8.41□□□□□ -1.06
GYPB-204ENST00000504951 WBP1LQ9NX94 342 aa8.41□□□□□ -1.06
GYPB-204ENST00000504951 COL5A3P25940 1745 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms