RNA–Protein interactions for RNA: ENST00000504878.1

CCNH-203, Transcript of cyclin H, humanhuman

TSL 1 (best) BASIC

Gene CCNH, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNH-203ENST00000504878 ZBTB1Q9Y2K1 713 aa15.87■□□□□ 0.13
CCNH-203ENST00000504878 GYS1P13807 737 aa15.86■□□□□ 0.13
CCNH-203ENST00000504878 RFC4P35249 363 aa15.86■□□□□ 0.13
CCNH-203ENST00000504878 TAF7Q15545 349 aaPredicted RBP15.86■□□□□ 0.13
CCNH-203ENST00000504878 CCDC146Q8IYE0 955 aa15.86■□□□□ 0.13
CCNH-203ENST00000504878 TMPOP42166 694 aaKnown RBP15.85■□□□□ 0.13
CCNH-203ENST00000504878 COL15A1P39059 1388 aa15.85■□□□□ 0.13
CCNH-203ENST00000504878 KIF13BQ9NQT8 1826 aa15.85■□□□□ 0.13
CCNH-203ENST00000504878 LAMB4A4D0S4 1761 aa15.85■□□□□ 0.13
CCNH-203ENST00000504878 USP42Q9H9J4 1324 aaKnown RBP15.85■□□□□ 0.13
CCNH-203ENST00000504878 STARD3NLO95772 234 aa15.84■□□□□ 0.13
CCNH-203ENST00000504878 RIPK4P57078 832 aa15.84■□□□□ 0.13
CCNH-203ENST00000504878 CCDC184Q52MB2 194 aa15.84■□□□□ 0.13
CCNH-203ENST00000504878 KLHL34Q8N239 644 aa15.84■□□□□ 0.13
CCNH-203ENST00000504878 MIS18AQ9NYP9 233 aa15.84■□□□□ 0.13
CCNH-203ENST00000504878 SRP68Q9UHB9 627 aaKnown RBP15.84■□□□□ 0.13
CCNH-203ENST00000504878 NLGN1Q8N2Q7 840 aa15.84■□□□□ 0.13
CCNH-203ENST00000504878 NLGN2Q8NFZ4 835 aa15.84■□□□□ 0.13
CCNH-203ENST00000504878 RUNDC1Q96C34 613 aa15.84■□□□□ 0.13
CCNH-203ENST00000504878 TEX13AQ9BXU3 409 aaPredicted RBP15.84■□□□□ 0.13
CCNH-203ENST00000504878 PRAMEF22A3QJZ6 481 aa15.83■□□□□ 0.12
CCNH-203ENST00000504878 MMP10P09238 476 aa15.83■□□□□ 0.12
CCNH-203ENST00000504878 RRP7AQ9Y3A4 280 aaKnown RBP15.83■□□□□ 0.12
CCNH-203ENST00000504878 CANXP27824 592 aaKnown RBP15.82■□□□□ 0.12
CCNH-203ENST00000504878 EIF5P55010 431 aaKnown RBP15.82■□□□□ 0.12
CCNH-203ENST00000504878 SCN7AQ01118 1682 aa15.82■□□□□ 0.12
CCNH-203ENST00000504878 KIAA1551Q9HCM1 1747 aa15.81■□□□□ 0.12
CCNH-203ENST00000504878 SNRPA1P09661 255 aaKnown RBP15.81■□□□□ 0.12
CCNH-203ENST00000504878 FKBP8Q14318 412 aa15.81■□□□□ 0.12
CCNH-203ENST00000504878 CD2APQ9Y5K6 639 aa15.81■□□□□ 0.12
CCNH-203ENST00000504878 USP16Q9Y5T5 823 aa15.81■□□□□ 0.12
CCNH-203ENST00000504878 A1BGP04217 495 aa15.8■□□□□ 0.12
CCNH-203ENST00000504878 PNISRQ8TF01 805 aaKnown RBP15.8■□□□□ 0.12
CCNH-203ENST00000504878 NARFQ9UHQ1 456 aa15.8■□□□□ 0.12
CCNH-203ENST00000504878 BCORQ6W2J9 1755 aa15.8■□□□□ 0.12
CCNH-203ENST00000504878 ANP32CO43423 234 aa15.79■□□□□ 0.12
CCNH-203ENST00000504878 LMOD3Q0VAK6 560 aa15.79■□□□□ 0.12
CCNH-203ENST00000504878 NEUROD2Q15784 382 aa15.79■□□□□ 0.12
CCNH-203ENST00000504878 USPL1Q5W0Q7 1092 aa15.79■□□□□ 0.12
CCNH-203ENST00000504878 TRIM35Q9UPQ4 493 aa15.79■□□□□ 0.12
CCNH-203ENST00000504878 AFDNP55196 1824 aaKnown RBP15.79■□□□□ 0.12
CCNH-203ENST00000504878 C10orf71Q711Q0 1435 aa15.79■□□□□ 0.12
CCNH-203ENST00000504878 ZPR1O75312 459 aa15.78■□□□□ 0.12
CCNH-203ENST00000504878 IL6STP40189 918 aaPredicted RBP15.78■□□□□ 0.12
CCNH-203ENST00000504878 EIF4A1P60842 406 aaKnown RBP15.78■□□□□ 0.12
CCNH-203ENST00000504878 BCL2L12Q9HB09 334 aa15.78■□□□□ 0.12
CCNH-203ENST00000504878 HOXD11P31277 338 aaPredicted RBP15.78■□□□□ 0.12
CCNH-203ENST00000504878 DDR1Q08345 913 aa15.78■□□□□ 0.12
CCNH-203ENST00000504878 NRXN2Q9P2S2 1712 aa15.77■□□□□ 0.12
CCNH-203ENST00000504878 N4BP2Q86UW6 1770 aaPredicted RBP15.77■□□□□ 0.12
CCNH-203ENST00000504878 GIGYF1O75420 1035 aaPredicted RBP15.77■□□□□ 0.11
CCNH-203ENST00000504878 PIP4K2AP48426 406 aaPredicted RBP15.77■□□□□ 0.11
CCNH-203ENST00000504878 CHD4Q14839 1912 aa15.76■□□□□ 0.11
CCNH-203ENST00000504878 NBPF26B4DH59 902 aa15.76■□□□□ 0.11
CCNH-203ENST00000504878 TM4SF1P30408 202 aa15.76■□□□□ 0.11
CCNH-203ENST00000504878 NBPF10Q6P3W6 841 aaKnown RBP15.76■□□□□ 0.11
CCNH-203ENST00000504878 NBPF15Q8N660 670 aa15.76■□□□□ 0.11
CCNH-203ENST00000504878 TSPYL4Q9UJ04 414 aa15.76■□□□□ 0.11
CCNH-203ENST00000504878 PARP3Q9Y6F1 533 aa15.76■□□□□ 0.11
CCNH-203ENST00000504878 BRCA1P38398 1863 aaKnown RBP15.75■□□□□ 0.11
CCNH-203ENST00000504878 PXDNLA1KZ92 1463 aa15.75■□□□□ 0.11
CCNH-203ENST00000504878 A0A087WZG4 1122 aa15.75■□□□□ 0.11
CCNH-203ENST00000504878 POLRMTO00411 1230 aaKnown RBP15.75■□□□□ 0.11
CCNH-203ENST00000504878 APAF1O14727 1248 aa15.75■□□□□ 0.11
CCNH-203ENST00000504878 C1QBPQ07021 282 aaKnown RBP15.75■□□□□ 0.11
CCNH-203ENST00000504878 BABAM1Q9NWV8 329 aa15.75■□□□□ 0.11
CCNH-203ENST00000504878 ZNF330Q9Y3S2 320 aaPredicted RBP15.75■□□□□ 0.11
CCNH-203ENST00000504878 NFIXQ14938 502 aa15.74■□□□□ 0.11
CCNH-203ENST00000504878 MRS2Q9HD23 443 aa15.74■□□□□ 0.11
CCNH-203ENST00000504878 TBC1D2BQ9UPU7 963 aa15.74■□□□□ 0.11
CCNH-203ENST00000504878 CHL1O00533 1208 aa15.73■□□□□ 0.11
CCNH-203ENST00000504878 YBX3P16989 372 aaKnown RBP eCLIP15.73■□□□□ 0.113e-11■□□□□ 9.9
CCNH-203ENST00000504878 GPR162Q16538 588 aa15.73■□□□□ 0.11
CCNH-203ENST00000504878 CAMTA2O94983 1202 aa15.72■□□□□ 0.11
CCNH-203ENST00000504878 DZIP3Q86Y13 1208 aaKnown RBP15.71■□□□□ 0.11
CCNH-203ENST00000504878 TBC1D9BQ66K14 1250 aa15.71■□□□□ 0.1
CCNH-203ENST00000504878 PELP1Q8IZL8 1130 aaKnown RBP15.71■□□□□ 0.1
CCNH-203ENST00000504878 ANKRD31Q8N7Z5 1873 aa15.7■□□□□ 0.1
CCNH-203ENST00000504878 TGFB2P61812 414 aa15.7■□□□□ 0.1
CCNH-203ENST00000504878 NPM2Q86SE8 214 aaKnown RBP15.7■□□□□ 0.1
CCNH-203ENST00000504878 NUP98P52948 1817 aa15.69■□□□□ 0.1
CCNH-203ENST00000504878 ZNF853P0CG23 659 aa15.69■□□□□ 0.1
CCNH-203ENST00000504878 KRT24Q2M2I5 525 aa15.69■□□□□ 0.1
CCNH-203ENST00000504878 CFAP44Q96MT7 982 aa15.69■□□□□ 0.1
CCNH-203ENST00000504878 LAS1LQ9Y4W2 734 aaKnown RBP15.69■□□□□ 0.1
CCNH-203ENST00000504878 DLEC1Q9Y238 1755 aa15.68■□□□□ 0.1
CCNH-203ENST00000504878 A0A0G2JLW4 131 aa15.68■□□□□ 0.1
CCNH-203ENST00000504878 SERPINB2P05120 415 aa15.68■□□□□ 0.1
CCNH-203ENST00000504878 BICDL1Q6ZP65 573 aa15.68■□□□□ 0.1
CCNH-203ENST00000504878 WWC3Q9ULE0 1092 aa15.68■□□□□ 0.1
CCNH-203ENST00000504878 ERBB4Q15303 1308 aa15.68■□□□□ 0.1
CCNH-203ENST00000504878 CARMIL3Q8ND23 1372 aa15.68■□□□□ 0.1
CCNH-203ENST00000504878 DPEP1P16444 411 aa15.67■□□□□ 0.1
CCNH-203ENST00000504878 KCNA3P22001 575 aa15.67■□□□□ 0.1
CCNH-203ENST00000504878 ARFGEF1Q9Y6D6 1849 aa15.67■□□□□ 0.1
CCNH-203ENST00000504878 SENP3-EIF4A1A0A087X0R7 540 aa15.66■□□□□ 0.1
CCNH-203ENST00000504878 RGL2O15211 777 aa15.66■□□□□ 0.1
CCNH-203ENST00000504878 YY1P25490 414 aa15.66■□□□□ 0.1
CCNH-203ENST00000504878 PDIA6Q15084 440 aa15.66■□□□□ 0.1
CCNH-203ENST00000504878 CLEC4GQ6UXB4 293 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms