RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 ZNF790Q6PG37 636 aa30.33■■■□□ 2.45
CDC42SE2-207ENST00000504701 CANXP27824 592 aaKnown RBP30.32■■■□□ 2.44
CDC42SE2-207ENST00000504701 VSIG10Q8N0Z9 540 aa30.32■■■□□ 2.44
CDC42SE2-207ENST00000504701 AFDNP55196 1824 aaKnown RBP30.31■■■□□ 2.44
CDC42SE2-207ENST00000504701 HEG1Q9ULI3 1381 aa30.31■■■□□ 2.44
CDC42SE2-207ENST00000504701 ATP10DQ9P241 1426 aa30.3■■■□□ 2.44
CDC42SE2-207ENST00000504701 POLRMTO00411 1230 aaKnown RBP30.3■■■□□ 2.44
CDC42SE2-207ENST00000504701 TM4SF1P30408 202 aa30.3■■■□□ 2.44
CDC42SE2-207ENST00000504701 TGFB2P61812 414 aa30.3■■■□□ 2.44
CDC42SE2-207ENST00000504701 DCTN1Q14203 1278 aa30.3■■■□□ 2.44
CDC42SE2-207ENST00000504701 MCM10Q7L590 875 aa30.3■■■□□ 2.44
CDC42SE2-207ENST00000504701 BCL2L12Q9HB09 334 aa30.3■■■□□ 2.44
CDC42SE2-207ENST00000504701 ZPR1O75312 459 aa30.29■■■□□ 2.44
CDC42SE2-207ENST00000504701 BCS1LQ9Y276 419 aa30.29■■■□□ 2.44
CDC42SE2-207ENST00000504701 KCNA3P22001 575 aa30.28■■■□□ 2.44
CDC42SE2-207ENST00000504701 ADCY9O60503 1353 aa30.28■■■□□ 2.44
CDC42SE2-207ENST00000504701 FCHSD2O94868 740 aa30.27■■■□□ 2.44
CDC42SE2-207ENST00000504701 NARFQ9UHQ1 456 aa30.27■■■□□ 2.44
CDC42SE2-207ENST00000504701 DLG5Q8TDM6 1919 aa30.27■■■□□ 2.44
CDC42SE2-207ENST00000504701 BTBD11A6QL63 1104 aa30.25■■■□□ 2.43
CDC42SE2-207ENST00000504701 NFIXQ14938 502 aa30.25■■■□□ 2.43
CDC42SE2-207ENST00000504701 PRAMEF22A3QJZ6 481 aa30.24■■■□□ 2.43
CDC42SE2-207ENST00000504701 CHRNA5P30532 468 aa30.24■■■□□ 2.43
CDC42SE2-207ENST00000504701 NRXN2Q9P2S2 1712 aa30.24■■■□□ 2.43
CDC42SE2-207ENST00000504701 STARD3NLO95772 234 aa30.23■■■□□ 2.43
CDC42SE2-207ENST00000504701 EIF5P55010 431 aaKnown RBP30.23■■■□□ 2.43
CDC42SE2-207ENST00000504701 SCN7AQ01118 1682 aa30.23■■■□□ 2.43
CDC42SE2-207ENST00000504701 A1BGP04217 495 aa30.22■■■□□ 2.43
CDC42SE2-207ENST00000504701 ZNF526Q8TF50 670 aaPredicted RBP30.22■■■□□ 2.43
CDC42SE2-207ENST00000504701 FMNL2Q96PY5 1086 aa30.22■■■□□ 2.43
CDC42SE2-207ENST00000504701 ZNF330Q9Y3S2 320 aaPredicted RBP30.22■■■□□ 2.43
CDC42SE2-207ENST00000504701 PIP4K2AP48426 406 aaPredicted RBP30.21■■■□□ 2.43
CDC42SE2-207ENST00000504701 C1QTNF8P60827 252 aa30.21■■■□□ 2.43
CDC42SE2-207ENST00000504701 ARFGEF1Q9Y6D6 1849 aa30.21■■■□□ 2.43
CDC42SE2-207ENST00000504701 GIGYF1O75420 1035 aaPredicted RBP30.2■■■□□ 2.43
CDC42SE2-207ENST00000504701 BICDL1Q6ZP65 573 aa30.19■■■□□ 2.42
CDC42SE2-207ENST00000504701 RTF1Q92541 710 aaKnown RBP30.19■■■□□ 2.42
CDC42SE2-207ENST00000504701 CARMIL3Q8ND23 1372 aa30.18■■■□□ 2.42
CDC42SE2-207ENST00000504701 TBC1D2BQ9UPU7 963 aa30.18■■■□□ 2.42
CDC42SE2-207ENST00000504701 USP16Q9Y5T5 823 aa30.18■■■□□ 2.42
CDC42SE2-207ENST00000504701 PLEKHF1Q96S99 279 aa30.17■■■□□ 2.42
CDC42SE2-207ENST00000504701 ARHGAP27Q6ZUM4 889 aa30.16■■■□□ 2.42
CDC42SE2-207ENST00000504701 MIS18AQ9NYP9 233 aa30.16■■■□□ 2.42
CDC42SE2-207ENST00000504701 SERPINB2P05120 415 aa30.15■■■□□ 2.42
CDC42SE2-207ENST00000504701 DDX10Q13206 875 aaKnown RBP30.15■■■□□ 2.42
CDC42SE2-207ENST00000504701 TBC1D9BQ66K14 1250 aa30.15■■■□□ 2.42
CDC42SE2-207ENST00000504701 TEX13AQ9BXU3 409 aaPredicted RBP30.15■■■□□ 2.42
CDC42SE2-207ENST00000504701 BCORQ6W2J9 1755 aa30.15■■■□□ 2.42
CDC42SE2-207ENST00000504701 PIM2Q9P1W9 311 aa30.14■■■□□ 2.42
CDC42SE2-207ENST00000504701 ANKRD31Q8N7Z5 1873 aa30.13■■■□□ 2.41
CDC42SE2-207ENST00000504701 THUMPD2Q9BTF0 503 aaKnown RBP30.13■■■□□ 2.41
CDC42SE2-207ENST00000504701 DLEC1Q9Y238 1755 aa30.13■■■□□ 2.41
CDC42SE2-207ENST00000504701 IL6STP40189 918 aaPredicted RBP30.12■■■□□ 2.41
CDC42SE2-207ENST00000504701 KDM3BQ7LBC6 1761 aa30.11■■■□□ 2.41
CDC42SE2-207ENST00000504701 A0A087WZG4 1122 aa30.11■■■□□ 2.41
CDC42SE2-207ENST00000504701 CCDC24Q8N4L8 307 aa30.11■■■□□ 2.41
CDC42SE2-207ENST00000504701 GPBP1L1Q9HC44 474 aaPredicted RBP30.11■■■□□ 2.41
CDC42SE2-207ENST00000504701 HTATSF1O43719 755 aaKnown RBP30.1■■■□□ 2.41
CDC42SE2-207ENST00000504701 DALRD3Q5D0E6 543 aaKnown RBP30.1■■■□□ 2.41
CDC42SE2-207ENST00000504701 SENP3-EIF4A1A0A087X0R7 540 aa30.09■■■□□ 2.41
CDC42SE2-207ENST00000504701 CAMTA2O94983 1202 aa30.09■■■□□ 2.41
CDC42SE2-207ENST00000504701 COL11A2P13942 1736 aaPredicted RBP30.08■■■□□ 2.41
CDC42SE2-207ENST00000504701 SNRPA1P09661 255 aaKnown RBP30.07■■■□□ 2.4
CDC42SE2-207ENST00000504701 TAF7Q15545 349 aaPredicted RBP30.07■■■□□ 2.4
CDC42SE2-207ENST00000504701 LAMB4A4D0S4 1761 aa30.07■■■□□ 2.4
CDC42SE2-207ENST00000504701 NBPF26B4DH59 902 aa30.06■■■□□ 2.4
CDC42SE2-207ENST00000504701 NFE2L2Q16236 605 aa30.06■■■□□ 2.4
CDC42SE2-207ENST00000504701 NBPF10Q6P3W6 841 aaKnown RBP30.06■■■□□ 2.4
CDC42SE2-207ENST00000504701 NBPF15Q8N660 670 aa30.06■■■□□ 2.4
CDC42SE2-207ENST00000504701 DZIP3Q86Y13 1208 aaKnown RBP30.05■■■□□ 2.4
CDC42SE2-207ENST00000504701 SBF1O95248 1867 aa30.04■■■□□ 2.4
CDC42SE2-207ENST00000504701 RALBP1Q15311 655 aa30.03■■■□□ 2.4
CDC42SE2-207ENST00000504701 C2CD5Q86YS7 1000 aa30.03■■■□□ 2.4
CDC42SE2-207ENST00000504701 NEFMP07197 916 aa30.02■■■□□ 2.4
CDC42SE2-207ENST00000504701 C9orf131Q5VYM1 1079 aa30.02■■■□□ 2.4
CDC42SE2-207ENST00000504701 PRR5LQ6MZQ0 368 aa30.02■■■□□ 2.4
CDC42SE2-207ENST00000504701 KIF3CO14782 793 aa30■■■□□ 2.39
CDC42SE2-207ENST00000504701 RASSF7Q02833 373 aa30■■■□□ 2.39
CDC42SE2-207ENST00000504701 MAPK8IP3Q9UPT6 1336 aa29.99■■■□□ 2.39
CDC42SE2-207ENST00000504701 NPM2Q86SE8 214 aaKnown RBP29.98■■■□□ 2.39
CDC42SE2-207ENST00000504701 CACNA1SQ13698 1873 aa29.97■■■□□ 2.39
CDC42SE2-207ENST00000504701 PRELPP51888 382 aa29.97■■■□□ 2.39
CDC42SE2-207ENST00000504701 EIF4A1P60842 406 aaKnown RBP29.96■■■□□ 2.39
CDC42SE2-207ENST00000504701 SETDB2Q96T68 719 aa29.96■■■□□ 2.39
CDC42SE2-207ENST00000504701 RNF181Q9P0P0 153 aa29.96■■■□□ 2.39
CDC42SE2-207ENST00000504701 MYBBP1AQ9BQG0 1328 aaKnown RBP29.96■■■□□ 2.39
CDC42SE2-207ENST00000504701 H0YIN7 160 aa29.95■■■□□ 2.39
CDC42SE2-207ENST00000504701 TTLL6Q8N841 843 aa29.95■■■□□ 2.39
CDC42SE2-207ENST00000504701 CCDC88AQ3V6T2 1871 aa29.94■■■□□ 2.38
CDC42SE2-207ENST00000504701 CCDC146Q8IYE0 955 aa29.94■■■□□ 2.38
CDC42SE2-207ENST00000504701 NMRK2Q9NPI5 230 aa29.94■■■□□ 2.38
CDC42SE2-207ENST00000504701 NGEFQ8N5V2 710 aa29.93■■■□□ 2.38
CDC42SE2-207ENST00000504701 CNBD1Q8NA66 436 aa29.93■■■□□ 2.38
CDC42SE2-207ENST00000504701 ZNF622Q969S3 477 aaKnown RBP eCLIP29.93■■■□□ 2.38
CDC42SE2-207ENST00000504701 BRIP1Q9BX63 1249 aa29.93■■■□□ 2.38
CDC42SE2-207ENST00000504701 RRP7AQ9Y3A4 280 aaKnown RBP29.93■■■□□ 2.38
CDC42SE2-207ENST00000504701 RIPK4P57078 832 aa29.92■■■□□ 2.38
CDC42SE2-207ENST00000504701 HLFQ16534 295 aa29.92■■■□□ 2.38
CDC42SE2-207ENST00000504701 ZNF219Q9P2Y4 722 aaPredicted RBP29.92■■■□□ 2.38
CDC42SE2-207ENST00000504701 PNISRQ8TF01 805 aaKnown RBP29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms