RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 POGKQ9P215 609 aa7.27□□□□□ -1.25
CLCN3-204ENST00000504131 H0YC42 278 aa7.26□□□□□ -1.25
CLCN3-204ENST00000504131 POLR3GO15318 223 aaPredicted RBP7.26□□□□□ -1.25
CLCN3-204ENST00000504131 TBCAO75347 108 aaKnown RBP7.26□□□□□ -1.25
CLCN3-204ENST00000504131 MATR3P43243 847 aaKnown RBP eCLIP7.26□□□□□ -1.25
CLCN3-204ENST00000504131 SMCR8Q8TEV9 937 aaPredicted RBP7.26□□□□□ -1.25
CLCN3-204ENST00000504131 TRIM63Q969Q1 353 aa7.26□□□□□ -1.25
CLCN3-204ENST00000504131 NEUROD6Q96NK8 337 aa7.26□□□□□ -1.25
CLCN3-204ENST00000504131 NEK1Q96PY6 1258 aa7.26□□□□□ -1.25
CLCN3-204ENST00000504131 RWDD1Q9H446 243 aaPredicted RBP7.26□□□□□ -1.25
CLCN3-204ENST00000504131 SENP3-EIF4A1A0A087X0R7 540 aa7.26□□□□□ -1.25
CLCN3-204ENST00000504131 OATP04181 439 aa7.26□□□□□ -1.25
CLCN3-204ENST00000504131 SYNE3Q6ZMZ3 975 aa7.26□□□□□ -1.25
CLCN3-204ENST00000504131 TMEM165Q9HC07 324 aa7.26□□□□□ -1.25
CLCN3-204ENST00000504131 POLR2FP61218 127 aaKnown RBP7.26□□□□□ -1.25
CLCN3-204ENST00000504131 CCT2P78371 535 aaKnown RBP7.26□□□□□ -1.25
CLCN3-204ENST00000504131 MRPL28Q13084 256 aaKnown RBP7.26□□□□□ -1.25
CLCN3-204ENST00000504131 FAM81BQ96LP2 452 aa7.26□□□□□ -1.25
CLCN3-204ENST00000504131 SCLT1Q96NL6 688 aa7.26□□□□□ -1.25
CLCN3-204ENST00000504131 SEL1LQ9UBV2 794 aa7.26□□□□□ -1.25
CLCN3-204ENST00000504131 EVLQ9UI08 416 aaPredicted RBP7.26□□□□□ -1.25
CLCN3-204ENST00000504131 MYO1BO43795 1136 aa7.26□□□□□ -1.25
CLCN3-204ENST00000504131 ZNF189O75820 626 aaPredicted RBP7.26□□□□□ -1.25
CLCN3-204ENST00000504131 KLHL10Q6JEL2 608 aa7.26□□□□□ -1.25
CLCN3-204ENST00000504131 CC2D2AQ9P2K1 1620 aa7.25□□□□□ -1.25
CLCN3-204ENST00000504131 RGL2O15211 777 aa7.25□□□□□ -1.25
CLCN3-204ENST00000504131 GUCY2CP25092 1073 aa7.25□□□□□ -1.25
CLCN3-204ENST00000504131 TRIM74Q86UV6 250 aa7.25□□□□□ -1.25
CLCN3-204ENST00000504131 TRIM73Q86UV7 250 aa7.25□□□□□ -1.25
CLCN3-204ENST00000504131 ARMC2Q8NEN0 867 aa7.25□□□□□ -1.25
CLCN3-204ENST00000504131 LRRFIP2Q9Y608 721 aaKnown RBP7.25□□□□□ -1.25
CLCN3-204ENST00000504131 PLIN1O60240 522 aa7.25□□□□□ -1.25
CLCN3-204ENST00000504131 DNAJC21Q5F1R6 531 aaKnown RBP7.25□□□□□ -1.25
CLCN3-204ENST00000504131 SPECC1Q5M775 1068 aa7.25□□□□□ -1.25
CLCN3-204ENST00000504131 MORC1Q86VD1 984 aa7.25□□□□□ -1.25
CLCN3-204ENST00000504131 KIF18AQ8NI77 898 aa7.25□□□□□ -1.25
CLCN3-204ENST00000504131 EEA1Q15075 1411 aa7.25□□□□□ -1.25
CLCN3-204ENST00000504131 CEP162Q5TB80 1403 aa7.25□□□□□ -1.25
CLCN3-204ENST00000504131 PABPN1LA6NDY0 278 aaKnown RBP7.25□□□□□ -1.25
CLCN3-204ENST00000504131 NAT1P18440 290 aa7.25□□□□□ -1.25
CLCN3-204ENST00000504131 TTC30AQ86WT1 665 aa7.25□□□□□ -1.25
CLCN3-204ENST00000504131 TMA7Q9Y2S6 64 aaKnown RBP7.25□□□□□ -1.25
CLCN3-204ENST00000504131 SOGA1O94964 1423 aa7.25□□□□□ -1.25
CLCN3-204ENST00000504131 TRAK2O60296 914 aa7.25□□□□□ -1.25
CLCN3-204ENST00000504131 HSPA4P34932 840 aa7.25□□□□□ -1.25
CLCN3-204ENST00000504131 JMYQ8N9B5 988 aa7.25□□□□□ -1.25
CLCN3-204ENST00000504131 LRRCC1Q9C099 1032 aa7.25□□□□□ -1.25
CLCN3-204ENST00000504131 PFDN1O60925 122 aa7.25□□□□□ -1.25
CLCN3-204ENST00000504131 FAPQ12884 760 aa7.25□□□□□ -1.25
CLCN3-204ENST00000504131 ANKRD23Q86SG2 305 aa7.25□□□□□ -1.25
CLCN3-204ENST00000504131 KINO60870 393 aaKnown RBP7.24□□□□□ -1.25
CLCN3-204ENST00000504131 AMOTL1Q8IY63 956 aa7.24□□□□□ -1.25
CLCN3-204ENST00000504131 PDCD7Q8N8D1 485 aaKnown RBP7.24□□□□□ -1.25
CLCN3-204ENST00000504131 BHMTQ93088 406 aa7.24□□□□□ -1.25
CLCN3-204ENST00000504131 DDX27Q96GQ7 796 aaKnown RBP7.24□□□□□ -1.25
CLCN3-204ENST00000504131 PPFIA2O75334 1257 aa7.24□□□□□ -1.25
CLCN3-204ENST00000504131 MYSM1Q5VVJ2 828 aa7.24□□□□□ -1.25
CLCN3-204ENST00000504131 DCAF11Q8TEB1 546 aa7.24□□□□□ -1.25
CLCN3-204ENST00000504131 ZFXP17010 805 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-204ENST00000504131 LMAN1P49257 510 aa7.24□□□□□ -1.25
CLCN3-204ENST00000504131 CCDC40Q4G0X9 1142 aa7.24□□□□□ -1.25
CLCN3-204ENST00000504131 RSPH1Q8WYR4 309 aa7.24□□□□□ -1.25
CLCN3-204ENST00000504131 CFAP45Q9UL16 551 aa7.24□□□□□ -1.25
CLCN3-204ENST00000504131 FAM184BQ9ULE4 1060 aa7.24□□□□□ -1.25
CLCN3-204ENST00000504131 BAG4O95429 457 aaKnown RBP7.24□□□□□ -1.25
CLCN3-204ENST00000504131 PSMD7P51665 324 aa7.24□□□□□ -1.25
CLCN3-204ENST00000504131 CEP135Q66GS9 1140 aa7.24□□□□□ -1.25
CLCN3-204ENST00000504131 SHQ1Q6PI26 577 aaKnown RBP7.24□□□□□ -1.25
CLCN3-204ENST00000504131 TMEM110Q86TL2 294 aa7.24□□□□□ -1.25
CLCN3-204ENST00000504131 CEP57Q86XR8 500 aa7.24□□□□□ -1.25
CLCN3-204ENST00000504131 UHMK1Q8TAS1 419 aaKnown RBP7.24□□□□□ -1.25
CLCN3-204ENST00000504131 CEP126Q9P2H0 1117 aa7.24□□□□□ -1.25
CLCN3-204ENST00000504131 FBXL5Q9UKA1 691 aa7.24□□□□□ -1.25
CLCN3-204ENST00000504131 ODF2LQ9ULJ1 636 aa7.24□□□□□ -1.25
CLCN3-204ENST00000504131 RABGAP1Q9Y3P9 1069 aa7.24□□□□□ -1.25
CLCN3-204ENST00000504131 SMTNL1A8MU46 457 aa7.23□□□□□ -1.25
CLCN3-204ENST00000504131 NAIF1Q69YI7 327 aaPredicted RBP7.23□□□□□ -1.25
CLCN3-204ENST00000504131 ARHGEF10LQ9HCE6 1279 aa7.23□□□□□ -1.25
CLCN3-204ENST00000504131 SFMBT1Q9UHJ3 866 aa7.23□□□□□ -1.25
CLCN3-204ENST00000504131 S100BP04271 92 aaPredicted RBP7.23□□□□□ -1.25
CLCN3-204ENST00000504131 LRRFIP1Q32MZ4 808 aaKnown RBP7.23□□□□□ -1.25
CLCN3-204ENST00000504131 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.23□□□□□ -1.25
CLCN3-204ENST00000504131 PPCSQ9HAB8 311 aa7.23□□□□□ -1.25
CLCN3-204ENST00000504131 RPSAP08865 295 aaKnown RBP7.23□□□□□ -1.25
CLCN3-204ENST00000504131 MAP3K7CLP57077 242 aa7.23□□□□□ -1.25
CLCN3-204ENST00000504131 FKBP15Q5T1M5 1219 aa7.23□□□□□ -1.25
CLCN3-204ENST00000504131 KIAA0825Q8IV33 1275 aa7.23□□□□□ -1.25
CLCN3-204ENST00000504131 CCDC112Q8NEF3 446 aa7.23□□□□□ -1.25
CLCN3-204ENST00000504131 SREK1Q8WXA9 508 aaKnown RBP7.23□□□□□ -1.25
CLCN3-204ENST00000504131 TONSLQ96HA7 1378 aa7.23□□□□□ -1.25
CLCN3-204ENST00000504131 RPGRIP1LQ68CZ1 1315 aa7.23□□□□□ -1.25
CLCN3-204ENST00000504131 ECEL1O95672 775 aa7.23□□□□□ -1.25
CLCN3-204ENST00000504131 INPP5BP32019 993 aa7.23□□□□□ -1.25
CLCN3-204ENST00000504131 KIF4BQ2VIQ3 1234 aa7.23□□□□□ -1.25
CLCN3-204ENST00000504131 TDRD7Q8NHU6 1098 aaKnown RBP7.23□□□□□ -1.25
CLCN3-204ENST00000504131 ZC3H15Q8WU90 426 aaKnown RBP7.23□□□□□ -1.25
CLCN3-204ENST00000504131 PAIP2BQ9ULR5 123 aaKnown RBP7.23□□□□□ -1.25
CLCN3-204ENST00000504131 NOL7Q9UMY1 257 aaKnown RBP7.23□□□□□ -1.25
CLCN3-204ENST00000504131 FILIP1LQ4L180 1135 aa7.22□□□□□ -1.25
CLCN3-204ENST00000504131 GKAP1Q5VSY0 366 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms